Acanthopagrus latus (yellowfin seabream): 119018061
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Entry
119018061 CDS
T08233
Symbol
hcn4
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4 isoform X1
KO
K04957
hyperpolarization activated cyclic nucleotide-gated potassium channel 4
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
alat04040
]
119018061 (hcn4)
Ion channels [BR:
alat04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
119018061 (hcn4)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
LPD1
Motif
Other DBs
NCBI-GeneID:
119018061
NCBI-ProteinID:
XP_036951292
EnsemblRapid:
ENSALTG00010020284
LinkDB
All DBs
Position
4:29757255..29834458
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AA seq
1455 aa
AA seq
DB search
MDRLHSSMRKRLYSLPQHIGQKASIMGEGEDADKDTRRKSIRMKPLPSPSPTSGGSCKGI
GETKSGESVIMETDIGRPMKTSSNGDCRRFRGSLSSITSRHVHDSDSAEERRLITDGDVT
PSEESPPGAIGDGPPDQGAQGASGGGGGGGGSQKDSPDQQSGFIKLDGIDQILPDDERLY
QAGFIHRQFGAMLQPGVNKFSLRMFGSEKAVEREQERVKSAGFWIIHPYSDFRFYWDLTM
LLLMVGNLIIIPVGITFFKDEHTPPWIVFNVVSDTFFLMDLVLNFRTGIVKEDNTEIILD
PQQIKIKYLRSWFVVDFISSIPVDYIFLIVETRIDSDFYKTARALRIVRFTKILSLLRLL
RLSRLIRYIHQWEEIFHMTYDLASAMVRIVNLIGMMLLLCHWDGCLQFLVPMLQDFPADC
WVSKNKMVNDTWGQQYSYALFKAMSHMLCIGYGMYPPVGMTDVWLTILSMIVGATCYAMF
VGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADMRQRIHDYYEHRYQGKMFDEESI
LGELNEPLREEIINFNCRKLVASMPLFANADPNFVTSMLTKLRFEVFQPGDYIIREGTIG
KKMYFIQHGVVSVLTKGNKETKLSDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDNF
NEVLEEYPMMRRAFETVALDRLDRIGKKNSILQHKVQHDLSSGVLNYQENEIIQQIVQHD
RDMAHCAHLLQNVPPQTPPSPTPVIWAPLIQAPLQAAAATTSVAIALTHHPHLPPTLFRP
PVSVLGSLKDPSSRLKKFHTFVPPSTAPGSAGDSPSSTPSKLRSGVDMPLLASFRAQHMT
SVTGTTSSNKQALGGEGQRGPSGAASGSSGGGATAFPFGPFSSSCSPSSSMAQLHPQPQH
QQPFRSNTPPLSNLFHQGSTSGSTGSGISGGAVGACGGATGWSSGGAVGGSVEGATGGDS
NWAGDDFTTGMTELAPGGHFGLGGATGGSVGEISGDSMAGISEGSLGAASGKVAGGASGV
SVGGIACGPMGDASRRSLRGTSRGSLGRASGGSVGGASGESIVVTTTGGSLGRASGGSMG
VVSGGLTIGASVGPIGGTSGDSMALNPGGSLGRASVGSTTSHIGGGSNGSGGGVIGGYIG
RAAAGAVGSHTGGSTACPVGGTSGGITAGLIGSSRCQSPISTGSSSPMPVQLFHSQPSPK
PPQVAPLQQFAGGGRTTSGLNLFPSPPPGSPSSSRRQHSQQPAESSPSSLGHFSLAGLQS
GFLPHQMSLERSALASLAQYGSANASPCLTPVAPSPTIQSPVAGRTFHYSDPSSATGSHS
SLLMPQSSIPSQLPSQPNPTGRDSPLGRFSEDLKLLSSSHPSLPQEVAHALGHQTPCASV
ETGYYPSPFSSPTLVPKPCSSVPGRMTPPIQMSPGHPHQTHSPGASLGSPLRRGSAAYSS
DLEPQTVRSKLPSNL
NT seq
4368 nt
NT seq
+upstream
nt +downstream
nt
atggacaggttgcactcctccatgcgtaaaaggctctacagtttgcctcagcacattgga
cagaaagcatctataatgggcgaaggagaagacgcagacaaggacacccggaggaagagt
attaggatgaagcctctaccgtcgccgtcgccgacctctgggggaagctgcaaaggcata
ggggagaccaaaagtggggagtctgtgatcatggagacggacatagggagaccgatgaag
accagctcgaacggagattgccggaggtttcgaggcagcctgtcgtccatcacaagtcgg
catgtgcacgactctgactcggcggaggagaggcgcctcatcaccgacggggatgtcacc
ccgagcgaggagagcccccccggagccatcggtgatgggccgccggatcaaggcgcgcag
ggggccagcggtggcggcggcggcggcggcgggagccaaaaagattccccagaccagcag
tcagggtttataaagttggatggcattgaccaaattctgccggacgacgagagattatat
caagctgggttcatacacagacagtttggagcgatgcttcaacccggggtcaacaagttc
tccctgaggatgtttgggagtgagaaggcggtggaacgggagcaagagcgggttaaatcc
gccggattttggataattcacccctacagtgatttcaggttttactgggacttgaccatg
ctgctgctgatggtgggcaacctcatcatcatccccgtgggcatcacgttcttcaaggac
gagcacacgcccccctggatcgtgttcaacgtggtctccgacaccttcttcctcatggac
ctggtcctcaactttaggacgggcatcgtcaaagaggacaacacagagatcatcctggac
ccgcaacagatcaagatcaagtacttgcggagttggtttgtggtggacttcatctcctcc
atccccgtggactacatcttcctcatcgtggagacgcgcatcgactcggatttctacaag
acggcgcgcgccttgcggattgtccgcttcacaaaaattctaagcttgctgcgactgctg
cgcctgtcgagacttattcgctacatccaccagtgggaagagatcttccacatgacctat
gacctcgccagcgccatggtgaggatagtcaacctgatcggcatgatgctgctgctgtgt
cactgggacggctgcctgcagttcctggtgcccatgctgcaggacttccccgccgactgc
tgggtgtccaaaaataagatggtgaatgacacatggggacagcagtactcctacgcactt
ttcaaagctatgagccacatgctgtgtattgggtatggcatgtaccccccggtgggcatg
acagacgtgtggctgaccatcctcagcatgattgtgggcgctacctgctacgccatgttt
gtgggccacgccaccgcgctaatccaatctctagactcgtctcgacggcagtaccaggag
aagtacaaacaggtggagcagtacatgtccttccacaagctgccggcagatatgagacag
agaatccacgactactacgagcaccgctaccagggcaagatgtttgacgaggagagcatc
ctgggagagctcaacgagccgctgcgtgaggaaatcatcaactttaactgtcgaaagctg
gtggcgtccatgcctctgtttgccaacgccgaccccaacttcgtcacctctatgctcacc
aagctgaggttcgaggtgttccagcccggggattatatcatcagagagggcaccatcggc
aaaaagatgtacttcatacagcacggagttgtcagcgtgttgaccaaaggcaataaagag
accaagctttcagatggctcctactttggagagatttgtttgctgacgcggggcagaagg
acagccagtgtccgagcggacacgtactgtcgtctgtactcactgtctgtggacaacttc
aatgaggtgctggaagagtatcctatgatgagaagggcctttgagactgttgccctggac
aggctggatcgcattggcaagaaaaactcaatcctgcagcacaaggtacaacacgacctc
agctctggtgtacttaactaccaggagaatgagatcatccagcagattgtgcagcatgac
agggacatggcccactgtgcccacctcttgcagaatgtcccaccccagacacctccctca
cctacccctgtcatctgggcacccctcatccaggctcctcttcaagcagcagctgccacc
acctcagtagccattgccttgacacaccatcctcaccttccaccaactctcttcaggcct
ccagtttctgttttggggtccctaaaagacccttctagtcggcttaagaagttccacaca
tttgttcctccatccacagcaccgggctctgctggggactctccgtctagtacaccctca
aaactgcgcagtggggtggacatgccattgctggcctcttttcgggcccagcacatgacg
tcagttacagggacaaccagctctaacaaacaggccttaggtggcgaaggccaacgtgga
cctagtggggcagcgtctgggtccagtggaggaggggccactgccttcccatttggacca
ttctcttcctcttgttcaccctcatctagtatggcccagctacacccacaaccacagcat
cagcaacccttccgctccaacaccccacctctctcgaacctcttccaccaaggatctaca
agtggaagcacagggtcaggaataagcggtggggccgttggagcttgtggtggtgctaca
ggttggtcttcaggtggagccgttggagggtctgtggaaggagccactggaggtgatagt
aattgggctggagatgactttacaactggaatgacagaattggctcctgggggccacttt
gggttgggaggagctactggtggatcagtaggagagatctcaggggattcaatggcagga
atatctgaagggtcattgggtgctgctagtggtaaggtagcaggtggggcatcaggggta
tcagtggggggcattgcatgtgggccaatgggagatgcatccaggagatcattgagaggg
acttcgagaggatcactgggaagagcatctgggggatcagtgggaggggcttctggggaa
tcaatagtagtgacgactactggaggatcgttagggagggcttctggtggatcaatggga
gtggtttctgggggattgacaataggagcctctgtcggtccaattggtgggacttctggt
gattcaatggcacttaaccctggaggatcgttgggaagggcttctgttggatcaacaact
agccatataggaggaggttcgaatgggtcagggggaggggtgattggaggatatattggc
agagcagcagcaggggcggtagggagccatactggaggttcaacagcttgtcctgtaggg
gggacttctggtggaattacagctggacttattggttcctcccgttgtcagagtcctata
tctactggttcgtccagtcctatgcctgttcagcttttccatagccagccatctcccaaa
cctcctcaagtggctcctttgcagcagtttgctggaggaggcaggactaccagtggctta
aacctcttcccttcccctccaccaggctccccatcgtctagtagaagacagcacagccag
cagcctgctgagagctccccatcttcccttggccattttagcctggcaggcctccaatct
ggcttcctgcctcatcagatgtccctggagaggtctgccctggcctccctggcccagtat
ggttcagcaaacgcatccccctgccttaccccagtggcacccagccctactattcaaagc
ccagtggcaggcaggacttttcactacagtgacccctccagtgccacaggatcccatagt
tctctgctcatgcctcaatcttctataccttcacagcttcccagccagccaaacccaacg
gggagagattccccactgggtcgcttttctgaggacttaaaacttttatccagctctcac
ccatccctgccacaagaggtggcccatgccttgggccaccaaactccttgcgcttctgtg
gaaactggatattacccctcacctttttcctcacccactcttgtgcccaaaccctgtagc
tcagtgccagggcgcatgactcctccaatccagatgtctccagggcaccctcaccagact
cattcccctggggcctccctgggctcacctctacggaggggctctgctgcttactcttca
gatctagaacctcaaactgtccgctctaaactcccttctaatttgtga
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integrated database retrieval system
