Acanthopagrus latus (yellowfin seabream): 119020104
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Entry
119020104 CDS
T08233
Symbol
ttc37
Name
(RefSeq) tetratricopeptide repeat protein 37 isoform X1
KO
K12600
superkiller protein 3
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119020104 (ttc37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alat03019
]
119020104 (ttc37)
Messenger RNA biogenesis [BR:
alat03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
119020104 (ttc37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_16
TPR_14
TPR_19
TPR_8
TPR_11
TPR_17
TPR_CcmH_CycH
TPR_12
TPR_9
ANAPC3
Fis1_TPR_C
YceG_bac
PknG_TPR
TPR_15
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
119020104
NCBI-ProteinID:
XP_036955108
LinkDB
All DBs
Position
5:8686597..8702062
Genome browser
AA seq
1570 aa
AA seq
DB search
MSSKEVKTALKSAREAIKNKEFKEALKHCKAVLKLEKNNYNAWVFIGLAASELEQPDQSQ
MAYKKAVELEPEQLLAWQGLSNLYEKTDQWDFQVELPNVYQKLVELYASSDKNKCYETIR
KLSDIYQSDKEYLKLAKVWLQLLQLKEEEAVDKKELLQLWQQMTKLLSDCLNEEQKDYET
QQHLITAFEKTMVLMDPIPGEEHKKVSADYVKCLSKLPQEEVKMKEACESMLSLYPNDSY
PLEVLCSHYLNTGVQTEDAVSSFSRLLDLAPSSGLGHLGLGTKALQEGRYKDAIKDLAQG
LKKMSSSTGWCNLAEAQFKMQRYSDSAVSCSQGLKVCASEDKELKVKLLKLKLEALVRSG
GEKAADQALETFPLIQDAEKDPVLVTLKGRAYLNKGQIDHALKVSSELVASNPNLAQGLV
LRGLAQLAQGQQQLAEESFLKAASQSPDCGEYYFLLGKLYWDKGEETRKDRSKAHTHLLK
AAKLDPNLGCAFRYLGHYYREVANDRARARGCYKKAFELDNDDAESGAASVDLCMEQDDM
DTALAILQSVIEKATPGSAKWAWMRRGLYHLKVGEHQQATADLQAALRADPEDWVCWECL
GEAYLNRRSFTAALKAFGKAHQLQPSSIYSVYQAAAIKQTLGKFKEAVAEYLQITAQQDY
VPALKGLGECQLSLAKSLMEECRDGGAIDLIQQAIQNLFRAVELRPDLSCLWKLLGDACT
AVSNVSPNRAQVLMPAPLAGLDPNTKSHTLTQAQTLKVGERCYARALKLMSEVPSLWYDL
GLNYFRQSSLPCPAEGDQNSPSLLLEKAQQCLKKAIMMDSGNHSNWNALGVISMREGLEN
FALAQHCFIKSIDVEPNNVVAWTNLGTLYLKKDNIELAHNAFKIAQSLEPLYVNCWIGQA
LIAEKVGSYDTMDLFRHTTELSTHMEGVKGYAYWVCSTLLDKSNRDSELYRYNIVQMNAI
SAAHVALNKYTERIQSDPVAFIMLGYLNEHLQLKRQALRAYQRAVELLQSKSSTEELAFA
LGNYGRALCTLGQLDEAVSVYNSTPLQELSDLTGLALACCRAGLIGESVNAYERALAVAS
TEKDKAYILTALALLQHRQGNIDSAKTLLFKCSMLKEPVSESLLCLCALGLVHSDATLAS
AALTELLKQGSASGDVVEQRCLLTCALLALQGNYSAVQREASRAVHSNPGNPSLWALLSR
VVPQYYPRKANGGAMAGHVACLSSMTQGKRALLYSGVNQLANGRHSGEDKHRNALRTMQR
AVLLCPDDPATWAGLMAACHTENTSCYLSGSAPCRQGLEQILMSVVSEKVRNVEEIERPL
AQSLEGWVLQQSVTGLMLGGQVEQAEALCSQVLSVSPEHPAVLLSLRQVQCHRLLASSGG
TVLPESVLEQLNNAVIMNPTNLGAWHWLAEVYRSQGLLVQAVMAYRQSLQLASQLGLHSS
QVASLLRLALLALGPCMAGVPRKDWTDLILEATTEVLKLGSSPMALLFQALLQYLTKMAA
RETRRLLERLVYVPSQEFPVTVVQVASWYLLRHLHAKNDQELMNVLLQHAKMNGDHRLLN
FYSLVASSSS
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtaaagaagtgaaaacagcgctgaaaagtgcaagagaggccataaagaacaaa
gagttcaaagaggctctaaaacactgcaaggctgtattaaaacttgagaagaacaattat
aatgcctgggtgttcatcggcctggcagccagcgagctggagcagccagaccaatcgcag
atggcttataaaaaggctgtggagctggagcctgagcagctactggcatggcagggcttg
tccaatctttatgagaagactgatcagtgggatttccaagttgagctacctaacgtctat
cagaagcttgttgaactgtatgcaagctctgacaaaaataaatgttatgagacgatcaga
aagctgtccgatatctatcagtctgataaagaatatttaaagttggcaaaagtttggctc
cagctccttcagttgaaggaggaggaggctgtggacaagaaagagttactgcagctatgg
caacagatgaccaaactcctctcagactgccttaatgaggaacagaaggattatgaaact
caacagcatttaatcacagcatttgagaagaccatggttctcatggatcctataccagga
gaggagcacaagaaagtctcagctgactatgtcaaatgcctttctaaactgccacaagaa
gaagtgaaaatgaaagaggcatgtgagtccatgttgtctctctaccccaacgatagttat
cctcttgaagtcctttgttctcactacctcaacacaggtgttcagactgaggatgcagtt
agctctttctcccggctcctggatctggcaccaagcagcggattaggtcacttgggtctg
ggcaccaaagcacttcaggaagggaggtataaggatgccattaaggaccttgcgcaaggg
ttgaagaaaatgagctccagcactgggtggtgcaatctggctgaagctcaatttaaaatg
cagagatactcagacagtgctgtatcatgctcacaaggtctgaaggtgtgtgcctctgaa
gacaaggagctgaaggtcaaactgcttaagctaaagctagaggctttagtcaggagtgga
ggagagaaagcggcagaccaggcattggagacatttccactgatccaagatgcagaaaaa
gacccagttctagtaacccttaaaggccgtgcatacctcaacaagggacaaatcgatcat
gcacttaaggtgtcatcagagctggtggcttctaaccctaacctggctcaggggttggta
ctgagaggactggcacaattggctcagggccagcagcagttggcagaggagagtttccta
aaggcggccagccagagcccagactgtggagaatattatttcttgctgggaaagctttac
tgggacaagggagaagagacccgtaaagacaggagcaaagctcatacacacctgctcaag
gctgcaaagttagacccaaaccttggttgtgcattccgctacctcggacattattacagg
gaggtggcaaacgaccgtgcccgggctcgaggctgttataagaaggcctttgagttggac
aatgatgatgctgagtctggagctgcctcagtggatctctgtatggagcaggatgatatg
gacactgccttagcaatacttcagtcggtgattgaaaaagccactccaggctcagctaaa
tgggcttggatgagacgaggactttaccacctgaaggttggagagcatcagcaagctaca
gctgatctgcaggcagctctgagggcagacccagaggactgggtgtgttgggagtgttta
ggtgaggcctacctaaaccgccggagcttcacagcagctctgaaggcctttggtaaagcc
catcagcttcaaccctcctcaatctacagtgtctaccaggctgccgctatcaaacagacc
ctcggcaagttcaaggaggcagttgcagagtacttgcagatcacagcgcagcaggactat
gttcctgctcttaaaggtcttggggagtgccagctgtctctggcaaagagtctaatggaa
gaatgcagagatgggggagccattgacctcattcagcaagcaatacagaacctcttcaga
gctgttgagctgcgtccagacctgtcctgtttgtggaagctgctgggagatgcttgcacc
gcagtcagcaatgtgtcgccaaacagagcccaggttctgatgcctgccccgctggcgggt
ttagacccaaacactaagagccacacactgactcaggcccagactctcaaagttggtgag
agatgttatgcccgtgctttgaagctgatgtctgaggtccccagcctttggtatgaccta
ggactcaactacttccgccagtccagcctaccctgccctgcagagggagaccagaactcc
ccatctctgctcctagaaaaggcccagcagtgtttgaaaaaagctatcatgatggacagc
gggaaccatagcaactggaatgccttgggagtgatttcaatgagagaaggccttgagaac
tttgctctggctcaacattgcttcatcaagtccatagatgttgaaccaaataatgttgtt
gcttggaccaaccttgggaccctgtatttgaaaaaggacaatatagagcttgcacacaat
gccttcaagattgctcagtcactggagccactttatgtcaactgttggattggacaggcg
ctgatagcagagaaagtgggaagctatgacaccatggatcttttcaggcacaccacagaa
ctcagcacacatatggagggggtgaaaggttatgcctactgggtgtgttcaaccctcttg
gataagagcaacagagactcggaactgtaccgctacaacatagtccagatgaacgccatc
tctgctgctcatgtggctcttaacaagtacacagagaggatccagtctgatcctgttgcc
ttcatcatgcttggttacctgaatgagcatctgcagctgaagaggcaggccctacgggct
tatcaaagagctgttgaactgcttcagtccaagtcctccacagaagagctggcttttgcc
ttaggcaattatggcagagctttatgcaccttgggccagttggatgaggcggtgtctgtg
tataattccactccgctgcaggagctcagtgatctgactgggctggctctggcctgctgc
agggcaggactcattggagagagtgtcaacgcctatgaacgtgccttggctgtggcttcc
actgagaaggacaaggcttacatcttgaccgctctggccctgcttcagcaccggcagggt
aacatagactcagccaagactctgctgtttaaatgctcaatgttaaaggagccagtctca
gagtccctgctgtgtttatgtgccctgggtttggtccacagtgatgctacattagcgtct
gctgccctgacagaactgctgaagcaaggttcagcctctggggatgttgttgagcagcgg
tgtctactcacctgtgccttgctggccctgcagggcaactatagtgcagttcaaagagag
gcttccagagctgtacacagtaatcctggaaacccatctctgtgggccctgctgtcaaga
gtggtaccgcaatactaccccagaaaagcaaacggcggagcgatggctggtcatgttgcc
tgtctctccagtatgactcaaggaaagagggcgttgttgtacagtggagtgaaccaactg
gccaatgggagacactctggagaggacaaacacagaaatgcactgaggactatgcagaga
gctgtactgctctgtcctgatgatccagcgacatgggcaggattaatggctgcctgtcac
acagaaaacacgtcgtgttatctttcaggttccgctccttgcagacaaggactggagcaa
atcctcatgtcagtggtttctgagaaagtgcgtaatgttgaggagatagagcgccctctg
gcccagagtctagagggctgggtactacaacagtcagtgacgggtctcatgctgggagga
caggtggagcaggcagaagccctctgctcacaggtactgagtgtgtctccagaacaccca
gcagtgctgctgtcactgagacaggtgcagtgccatcgcctccttgcttccagtggtggt
accgtcctaccagagtctgtgctggagcaactaaacaacgcagtgattatgaaccctacc
aaccttggggcatggcattggctggctgaggtgtatcgcagccagggtctgctggtccag
gcggtcatggcctacaggcagagtctgcagctagcctcacagcttggcttgcacagcagc
caggtagccagcctccttcgacttgccctgctagccctcggaccctgtatggcgggtgtc
cccagaaaagactggacggacctgatactagaggccaccactgaagtcttgaagctgggt
tcatccccgatggccctactttttcaggccctgctccagtatttgaccaagatggctgct
agggaaacaaggcgtttgctggagaggctggtatatgtcccctctcaagagttcccagtg
acagtcgttcaggtggccagctggtacctcctcagacacctgcatgccaaaaatgaccag
gagctaatgaatgtcctattgcaacatgccaaaatgaatggagatcacagactgctgaat
ttttattcactggtcgcctcttcatcatcctga
DBGET
integrated database retrieval system
