Acanthopagrus latus (yellowfin seabream): 119024185
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Entry
119024185 CDS
T08233
Name
(RefSeq) LOW QUALITY PROTEIN: cyclic nucleotide-gated cation channel beta-1-like
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
119024185
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
alat04040
]
119024185
Ion channels [BR:
alat04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
119024185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
119024185
NCBI-ProteinID:
XP_036962601
LinkDB
All DBs
Position
8:23526893..23548339
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AA seq
1598 aa
AA seq
DB search
MFNWVVKVVPQPPEAPGTDEAGKASATDHNKNRQVKSLLKSTDEASDDSQAQTGVLGWLS
NGFVSAMPQPAGSPRPGRADTGQSGEDGESSGVIGWVTQGLTKVLPQPDEKYKESNDDDE
EHTEVFEIAKMPDYDPLPHVPVVEMESEDEVSEVERVPPQFPPNVVNWLKQMVPQPVTPG
SVPIEPSPKSSRSSLDKILSPPPESLSGISLDTDSKASGVVGWFISGLGLKVPQPAIPPK
DDAEAASEVLKKVSVKLKPDMVLEDVESDNEGTRKHEHQSQAAAPSPSLTPLTSHQQQEA
SQQSSSLQSQKCSDTSPQAEQSESGAKMSLEDAETQTGRWTPFIESIKREAEDVALATME
ERLMQERLEMARMAEEVARQTAEMAIRQMASEGQSIKLSLGSQELLDEPTAELPEPQEEE
SEVVDHCKVTQEEQSLAEEEVKAVTEDSIVEEPEVKEEAEPQQTSPSPPPSPEPVKTVEP
EPEPESQPEPEPETKESVPEAEPITQQPQKSEKDVQSPNADKTSEKEEEAPGDDCGAPVS
CDAIKSCLMRIPHTSECFGNINAFFKENGISTPKIPPMPKLPTQLSEVTKYLPSLPPELR
QEFSQIRLTQVPQNIAQTLTELLPKSSDGSVGPSLSSLSQSFSDIPQKLSQIPSRTQQYF
LNVQNRLNSLCLKMPKEQQQQQNQQKDKNQQDLELNRLIRHTPLPPAHHPQLRSRSPSPS
SPNGSALELPNVPSYPRLPPIVSPPSKQLNSLSRQLSGLSNPAFFIEDDSDIPAIRRADS
SSLSLRPAVNVEDVDSDHEIGGRGGGVEGQSNVPQILTPQDPKLTTLTVPVTPSGGRQSK
GEKDGRNRRTIWTKIRRLHSQSEDDDDEANIPVRAWPSQSSLHSTDDILKERPASSASQT
STVVNERLQELVRMFKARTEKAKEKLIDPDSSDEDSIIPSPPQASAPQPAPAAQPVNEGE
AQAGPSGGGGGGGGIEIGAEEEQCGRRSKVKTPRWIRACMHYRFPASIDPFTNLMYVLWM
LLVTLAWNWNVWFIPVRWAFPYQTPDNIYYWLLIDYLCDLIYIMDISIFQPRLQFIRGGD
IVSDKKEMRKNYMKTKRFRFDVASLVPLELFYFKTGVNPLLRLPRLLKINSFFEFNERLE
AILTKAYIYRVIRTTTYLLYCLHCNACLYYWGSAFNGLGSTQWVYNGEGNSYIRCYYFAV
KTLITIGGLPDPTTLFEIVFQLINYFVGVFAFSIMIGQMRDVVGAATAGQTYYRTCVDNT
IKYMSSYRIPKDVQNRVKTWYNYTWQSQGMLDEQELLTQLPDKMRLDIAIDVNYSIVSKV
PLFQGCDRQMIFDMLKSLRSVVYLPGDYVCKKGEVGREMYIIKAGEVQVVGGPDGKTVFV
TLRAGSVFGEISLLAVGGVNRRTANVIAHGFANLFILDKKDLNEILVHYPESKKLLRKKA
RKMLAKGKKPEPKAEAKNPPQVPPAPVRTETPRLLRAALEMTERSTGLKGALAKVKEKTN
KSSISLQPSISSTLPPPSPTSSSGPDRDADTPSPMSASSATFRSASHCRNNNNNNSVRPH
SPSQCAGDEDKNLAMNRREEGASEVDGSRCGNRKEKML
NT seq
4797 nt
NT seq
+upstream
nt +downstream
nt
atgtttaactgggtggtgaaagtggtcccccaaccccctgaagcccctgggacagacgaa
gccgggaaggcctctgccactgaccacaacaaaaacagacaggtaaaaagtctgctgaaa
agcacagatgaggcttcagacgacagtcaggcccagactggagttctaggctggctgtct
aatgggttcgtcagcgccatgcctcaaccagccggctcccctcgacccggcagggctgac
accggccagtcaggggaggatggagaaagttccggagtgataggctgggtcactcagggt
ctgaccaaggtgttgcctcagccggatgagaagtacaaagagtctaacgacgatgatgag
gaacacactgaggtatttgaaatagcaaaaatgccagattatgatcccctcccacacgtc
cctgtggtggagatggaatcagaagacgaggtgtcggaggtggagcgcgtgccccctcaa
tttcctcccaacgtggtgaactggcttaaacagatggtccctcagccggtcacccctggg
tccgtaccaatagaaccatcacccaagtcctcccgctcctctctggacaaaattttgtct
ccaccacctgaatctctcagtggcatctcactggatactgacagcaaggcctccggtgtg
gtcggctggttcatatcaggactgggcctgaaggttcctcagcctgcgatcccacccaaa
gatgatgccgaggctgcatctgaagttctaaagaaagtttcagtcaaactcaaacctgac
atggtactagaagatgtggagtcagacaacgagggcaccaggaagcatgaacatcagtct
caagctgcggcaccatccccatcactgactccactgacatcacaccaacagcaggaggcc
tcacagcagtcgagttcactgcagtcccagaagtgcagtgataccagcccacaagcagaa
cagtcagagagtggagcaaaaatgtctctagaggatgctgagacccagacaggccgctgg
acaccgttcattgagagcattaaaagggaggcagaagatgtagctttggctactatggag
gaacgtctcatgcaggagcgcctggagatggcccgtatggctgaggaggtggccaggcag
acagctgagatggccattagacagatggccagtgagggacagtccatcaagctctcactg
gggagtcaagaactgctggatgagcccacagctgagctgccagaaccacaagaagaggag
agcgaagtggtggaccactgtaaagtcacacaagaggaacagagtcttgctgaggaagaa
gtgaaggcagtgactgaggactctattgtcgaggaaccagaagtaaaggaggaagcagag
ccacagcagacctcaccctctccacctccaagtcctgaaccagttaagacagtggagcca
gagccagagcctgaatcacaacctgagccagagccagagaccaaggaatctgttccagaa
gcagagcctataacccagcagccacagaaatctgagaaagacgttcaaagccccaacgct
gacaaaacatctgaaaaagaggaggaagcccctggggatgactgtggagctccagtcagc
tgcgatgcaattaagagctgcctgatgcgcattccgcacacctcagagtgcttcggcaac
atcaacgcattcttcaaagaaaacggcatatccactcccaaaataccccccatgcctaag
ctacccacccagctctctgaagttaccaagtacctaccctccctaccacctgaattgcgc
caggaattctcccagatccgactcacgcaggtcccgcaaaatattgcccaaactctgact
gagttattgcccaaaagctctgacggatcagttggccccagtctgtccagcctttcccag
agcttttcggacatcccgcagaagctctcccagattcctagccggacgcagcagtacttc
cttaacgtccagaaccgcctcaacagcctatgcctcaagatgcctaaggaacaacaacaa
cagcaaaatcagcagaaagacaagaatcagcaagatttagagctcaaccggctcatccga
cacacccctcttcctcctgctcaccatcctcagctccggtcccgctccccgtctccatcc
tctcctaatggaagcgccctcgaactgccaaatgtgccatcctacccacgcctgccacct
attgtcagccccccatcaaagcagctcaactcactttcccgccagctgtctggtctctct
aacccagcgttcttcattgaagacgactcagacattccagcaatacgacgtgcagacagc
tcaagcctaagccttcgtccggccgtcaatgtagaggatgttgactcagatcatgagata
ggggggagaggaggaggagtggagggacagagcaatgttccccaaatcctaacaccacag
gacccaaaacttacaaccctaactgtccccgtgaccccttcaggaggtcgtcagagtaaa
ggagaaaaagatggaaggaatcgtaggactatctggacaaagattaggcggctgcactcc
caaagtgaggatgatgatgatgaagcaaacatccctgtcagagcctggcccagccagtcc
agcctgcacagcacagatgatatacttaaagaacgtccagcgtcttcagctagtcagacc
agtacagtggtcaatgagcgtcttcaggagctggtccggatgtttaaagcgagaaccgag
aaggctaaggagaaactcattgaccctgacagctcagatgaagacagcattatcccttct
cctcctcaggcttcagctcctcagcccgctcctgcagctcagccagtgaacgagggagag
gcacaagcaggtccatcaggaggaggaggcggaggaggaggaatagaaattggggcagag
gaggagcagtgtggccgccgcagcaaggtgaaaactcctcgatggatacgagcctgtatg
cactaccgcttccctgccagcatcgaccccttcaccaacctgatgtacgtgctgtggatg
ctactggtcactctggcatggaactggaatgtgtggttcatccctgtgcgctgggccttt
ccctaccagactccagacaatatctactactggctgctgatcgactacctgtgtgacctt
atttacatcatggacatcagcatctttcagccgcggctgcagtttatccgcggaggggac
atagtgtctgacaaaaaagaaatgagaaagaactacatgaaaaccaaacgcttcagattt
gatgtagccagccttgttccactggaactcttctattttaaaactggcgtcaaccctctg
cttcgcttacccagactactgaagatcaactccttttttgaattcaacgagcgtcttgag
gctatcttaaccaaagcctacatctacagggtgatacgtacgaccacctaccttctttac
tgtctccactgcaatgcctgtctgtactactggggctctgccttcaacggactaggatca
acacaatgggtgtacaatggcgagggcaacagttacattcgctgttactactttgcggtg
aagaccctcattaccattggcggtctgccggaccccaccaccctgtttgaaattgtcttc
caacttatcaactactttgttggagtctttgccttctctatcatgattggacagatgcgt
gatgtggtcggtgcagccacagctggtcagacttactaccgcacatgtgtggacaacacg
attaaatacatgtcctcctatcgaatccccaaagacgtccagaaccgtgtcaaaacctgg
tacaactacacctggcaatcacaaggcatgctagatgagcaggagctactgactcagttg
ccagataaaatgcgtctggacattgctatagatgtcaactactccatcgtcagcaaagtc
cccctttttcagggttgtgacagacagatgatctttgacatgctgaaaagcttacgctcc
gttgtttacctgcctggggattatgtctgcaaaaagggtgaggtgggtcgggagatgtac
atcataaaagcaggggaggtgcaggtggttgggggacctgatggaaagacagtctttgtc
actctcagagcaggatcagtgtttggagagatcagtttgcttgcagtaggcggggttaac
aggcgcacagcaaatgtgatcgcacatggctttgctaatctcttcatcctggacaagaaa
gacctgaatgagatcctggtccactatcctgagtccaagaaactgctccgcaagaaggcc
agaaagatgcttgctaagggaaagaaacctgaacccaaagcagaggctaagaatccccct
caggtcccgccagcccctgttaggacggagacccctagactgctgagagcagccctggag
atgacggagagatctactggacttaaaggagctctggctaaagtcaaagaaaaaaccaac
aagtccagtatctcgctacagccctccatctcctccaccctgcctcctccatctcccacc
tccagctctggacctgacagagacgcagacacgccgtcacccatgtctgccagctctgcg
acatttcgctccgcttcccattgccgcaacaacaacaacaacaactctgtgaggcctcac
tctccctcacagtgcgctggcgacgaagacaagaatcttgccatgaaccgaagagaggag
ggtgccagtgaggtcgatggaagcagatgtgggaataggaaggagaaaatgttgtga
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