Acanthopagrus latus (yellowfin seabream): 119024188
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Entry
119024188 CDS
T08233
Symbol
smc1b
Name
(RefSeq) structural maintenance of chromosomes protein 1B isoform X1
KO
K06636
structural maintenance of chromosome 1
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04110
Cell cycle
alat04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
119024188 (smc1b)
04114 Oocyte meiosis
119024188 (smc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
alat03036
]
119024188 (smc1b)
Chromosome and associated proteins [BR:
alat03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
119024188 (smc1b)
Meiosis-specific proteins
Cohesin complex and associated proteins
119024188 (smc1b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_29
AAA_13
Motif
Other DBs
NCBI-GeneID:
119024188
NCBI-ProteinID:
XP_036962605
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Position
8:complement(19209171..19221786)
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AA seq
1246 aa
AA seq
DB search
MGYLKQIEVENFKSWRGKQVIGPFMRFNCIIGTNGSGKSNVMDALSFAMGERTASLRVRH
LSDLVHGAHIGRPVSDTARVSMRYCDDDEQETVFCRSVSGDSSVYRINGSQVTSAKYLEA
LEKIGIVTKARNCLVFQGAVESIALKDPKERTKMFEIICQSKEYAEEYDKKKEALLKAKE
DSQFHFNKKKSATAEKKQVSQDKVEAQKYQALVEDLDQNRLQLSLAELYHNEKGVNALSN
ILREKQQAVAAMTNTLVKAEQMVKTHKKEHGRLTREQQHVEKEIRTQEQIHSQCRSQYVK
AKVNTSHHMKKAEKLRDALRKSQRLIVNKEQELAENQQEITELERAWRNYEKQVQEKGAS
RGRDIELDEDQLARYKELKELAQKQGAVFSQQAEKLHWEVKADYEKMAFDQRRKKEVEAA
IRNSQTQLEDLTSRVEKLEQYTETCSSSLEEYRQQEESLSAELEQGRQRTEEVNQELGQV
LEELGNARLDSQESGRQLQRKELLEKLRRLYPESVYGRLSDLCCPIHKKYQLAVTKVCGL
YMNAIVVASEKVARDCITFIKEERAERETFLPIDYLDVRPLSERLREVPGTKMVVDVVQI
NASTGANQLKKVVQFVCGNALVCETMKEARSVAFDRQERHKTVSLDGTMFSKSGQISGGS
SDLRTKAQCWDQKTMMKLKERKDQLTAELRDLMRLKRKESDLKQIIAQAHGAKTRLKYSK
AELENLRKKNILKCQAEISRMESESANLESEIQMQQEGVEAKDAEMRKIREQIHQIEDLV
FSDFCAEIGVDSIREYEQEHLKQQTELDKKRLEFESQRTQLYAQLEYEQNQLEEQKKKLH
KMEETIDKEERTVAEYRRDEEKLLVAVEESQNKLLELQNQLLSKKSQVVTAKAELDQKTQ
TVQEINKQLVKLQREVMSAETALEQKRLARHNLLLACKIQSLPIILLSGSLDEISEVQLD
TESESTSATIDIYEREAQLVIDYSSLEAELGSLQAEEEVEAYLEKLKESLSTVEGVLHRT
TAPNLKALEKMREVKDKLHGVTQAFDASTRAARKCSQEFEQVKSKRLHLFTQCFEHVSVI
IDQIYKRICRNSSAQAILSAENPDEPYLGGINYNCVAPGKRFMSMDNLSGGEKAIAALAL
LFAIHSFRPAPFFILDEVDAALDNTNIGKCVCFICIQVTSFLREESRGNMQIIVISLKEE
FFSKSDALLGVYSDFDECMFSRILTLDLQPYPLVEEDKEKDKTGHV
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atggggtatttgaaacaaattgaggtagaaaacttcaagtcatggcgagggaagcaagtt
atcggtcctttcatgcgatttaattgcataattggcacaaatggctccggcaagtccaac
gtcatggatgccctgagctttgccatgggggagcgcactgcctcgctccgggtgaggcac
ctcagtgacctggtgcacggagcccacatcggccggccggtgtccgacactgcccgcgtc
agcatgcgctactgcgacgatgacgaacaggagaccgtcttctgccggagcgtctcaggt
gactcctctgtgtatcgcatcaatggttcacaagtcacttcggccaaatatttggaggcg
ctggagaagattggcattgtgaccaaagccagaaactgtctggtttttcagggggcagtg
gagtccatagctttgaaggatccaaaggagaggaccaagatgtttgagatcatctgtcaa
tcaaaagagtatgctgaagagtatgataagaagaaagaggccctgctgaaggccaaagag
gactctcagtttcacttcaacaagaagaaatctgctactgctgagaagaaacaagtgtcc
caggataaagtagaggcccagaagtaccaggcacttgtggaggaccttgaccaaaaccgc
ctgcagctgagcctggctgagctctaccataatgagaagggtgtgaacgccctcagcaac
atcctgagggagaaacagcaggctgtagctgccatgaccaatacactggtgaaagcggag
cagatggttaaaacccacaaaaaggaacatggacgcctcaccagagagcagcagcatgta
gagaaggagatccgcacccaagagcaaattcattctcagtgccggtcccagtacgtcaag
gccaaggtaaacacctcccatcacatgaagaaggctgagaagctccgtgatgccctgagg
aagagtcagaggctgattgtgaataaagagcaggagctggcagagaatcagcaagaaatc
actgagctagagagagcatggaggaactatgagaagcaggtacaggagaagggagcctcc
aggggtagagacatcgagcttgatgaagatcagctagcacgatataaagagctgaaggag
ctggctcagaagcagggtgctgttttcagccagcaggcagagaagctgcactgggaggtc
aaagcagactacgagaagatggcatttgaccagcgcagaaagaaggaagtggaggctgcc
atcaggaacagtcagactcagctggaagatttgacaagcagagtagagaagctggagcag
tacacagagacctgcagctcgagccttgaagagtaccgtcagcaggaggagagtctgagt
gcagagttagagcagggccgtcagcgcactgaggaggtgaaccaggagctgggccaggtg
ctggaggagctggggaatgcccgtctagacagccaggaaagcggacgccagctgcagcgc
aaagagctgctagagaagctccgcagactctaccctgaaagtgtgtatggtcgtctgtct
gacttatgctgccccatccataagaagtatcaacttgctgtcacaaaagtgtgcggcctc
tacatgaatgccattgtagtggcctcagagaaagtggcccgtgactgtatcacttttatc
aaggaggagcgagctgaacgtgagaccttcctgcccatcgactacttagatgtgagacct
ctgagtgagcgactgagggaggtgcctggtaccaaaatggtggttgatgtcgtacagatt
aatgcttccacaggtgccaaccagctgaagaaagttgtgcagtttgtctgtggcaatgcc
ttagtgtgtgaaaccatgaaagaagcaaggagcgtggcctttgataggcaggagcgccat
aagacagtgtctctggatgggacaatgttttcaaaatccggtcagatctctggaggctcc
agtgacctgcggaccaaagctcaatgctgggaccagaagaccatgatgaagctgaaggaa
cgcaaggaccagctgacagcagagctgcgagatttgatgaggttgaagcggaaagaatct
gacctgaaacagatcattgctcaggctcacggtgcaaagacccgcctcaaatactccaaa
gctgagctggaaaaccttcggaagaaaaacatccttaagtgccaagcggagatttctcgt
atggagagtgaatctgcaaacctggagtctgagatccagatgcagcaggagggtgtggag
gcaaaggatgcagagatgagaaagataagagaacagatacaccagatcgaggacttggtg
ttttctgacttctgtgctgagattggtgtggacagcattagagagtatgagcaggagcat
ctgaaacagcaaacagagcttgacaagaagcggctggagtttgagagtcagcgcactcaa
ctgtatgcacagctggagtacgaacaaaaccaactggaggagcagaagaagaagctccat
aaaatggaggaaacaattgacaaggaggagaggaccgtggctgagtacaggagggatgag
gagaagctgctggtggctgtggaggagagtcagaacaaactgttggagctgcagaaccag
ctgctgtctaagaagagccaggtggtcactgccaaagctgagttggaccagaaaacccag
accgtccaagagataaacaaacagttggtcaagcttcagcgggaggtgatgagtgcagag
acggccttggagcagaaacgtttggccaggcacaacttactgctggcctgtaagatccag
agtctgcctatcattctgctgtcaggcagcttggatgaaatcagtgaggtgcagttggac
acagaatctgaaagcacttcagccaccattgacatctatgagagagaggcacaattagtc
atcgactactccagcctggaggcagagctcgggagtctgcaggcagaagaggaggtggag
gcctacttggaaaagctgaaggagtcactgtccaccgtagagggagtgctgcatcgcacc
actgcccccaacctcaaagctctggagaagatgagggaggtgaaagacaagttacacgga
gtgacacaagcatttgatgccagcactagagctgccagaaaatgcagtcaggagttcgag
caagtcaaatccaaacgcctccatctcttcacccagtgcttcgaacatgtgtcagttata
attgatcagatctataaaagaatatgcaggaacagcagtgcgcaggccattctgagtgca
gagaatccagatgagccatacctcggtggcattaactacaactgcgtggcgccaggaaaa
cgcttcatgtccatggacaacctttcgggtggagaaaaggccattgcagccctggctctg
ctgtttgccatccacagctttcgccctgctcccttcttcatcttggacgaggtggatgca
gccctggacaacactaacattggcaagtgtgtgtgtttcatttgtatccaggtgaccagt
ttcctcagggaggagtccagggggaacatgcagatcattgtcatctccctgaaggaggag
tttttctccaagtctgacgctttgctgggagtctactcagattttgatgaatgcatgttc
agtcgcattctgactctggacctgcagccctaccctctggttgaagaggacaaagagaag
gataagacaggacatgtgtag
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