Acanthopagrus latus (yellowfin seabream): 119025683
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Entry
119025683 CDS
T08233
Symbol
scn1laa
Name
(RefSeq) sodium channel, voltage-gated, type I-like, alpha isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
alat04040
]
119025683 (scn1laa)
Ion channels [BR:
alat04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
119025683 (scn1laa)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
IQ_SCN5A_C
GPHH
ATP-synt_B
PFF1_TM
Spem1
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
119025683
NCBI-ProteinID:
XP_036965403
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Position
9:complement(15737678..15767615)
Genome browser
AA seq
1501 aa
AA seq
DB search
MTKVLCANLFCTVCSWTLRASGKYYMLFFVLVIFLGSFYLINLILAVVAMAYEEQCQVTI
KEAKEKEEEFQAILEQLKRQQEEAQALATAATAEGGEASKKVTGTESSSEASKLSSKSAK
ERRNRRKKRKEEEGKGADEQFPKSESQDSMKKGRCRFSVDANQLTYDMKCSSTHQADTTD
TDCKLADGGTSHECMEFLEGPDTRQRALSIASVITSTVEELEESRQKCPPFWYDFADTFL
IWECCPQWLKFKALVRLIVMDPFADLSITICIVLNTVFMAMEHHPMSPGFGLVLSVGNVV
FTVIFTAEMVFKIIALDPYYYFQKGWNIFDAIIVSLSLLEFCMSSSGSMSVLRSFRLLRV
FKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKYYTLHVHKISDD
CNPRWHMKDFFHSFLIVFRVLCGEWIETMWDCMEVAGMPMCIIVYMMVMVIGNLVVLNLF
LALLLSSFSADNLAATEDDSDTNNLQIAIARIHRGIAYAKSMLRSGFSSACLKCVKKGKG
EDKSQEELHKPLGPNGVPNHTIKDFPRNGNGDVTGVDKSGDKYIVSSKSDDSIMSFINNP
SLTITVPIAVGESDFENLNTEDFSSASSDVACHVNIDDDNQSSSSEGSTVDGSLVGEGKE
QVDVELEEYIEPDGCFPDAFVQKFRCCQVNVDVGMWKRWWTLRKTCYRIVEHNWFETFII
LMILLSSGALAFEDVYIERKKTIKTVLEFADKIFTYVFILEMLLKWVAYGFAKYFTNAWC
WLDFLIVDVSVVSMVANAIGYSDLGAIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIP
SIFNVLLVCLIFWLIFSIMGVNLFAGKFYSCVNRTTNKPFDTSEVRHVNDCIRLGPDYRW
KNYKVNFDNVALGYLALLEVATFKGWMGIMYSAVDSRNKTGLQPIFENNLKMYLYFVVFI
IFGAFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPS
NKIQGYIFDFTTKQAFDIVIMVLIWLNMVTMMVETDDQSETQENVLQKINIVFIVIFSGE
CLLKMISLRQYFFTNGWNVFDFIVVILSIIGVFLSKLIEKYFVSPTLFRVIRLARIGRVL
RLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKREDGIDDLFNF
ETFGNSMICLFQITTSAGWDLLLSPILNKLPDDCNSSMEHPGSSVKGDCGNPPVGIAFFV
SYIIICFLIVVNMYIAVILENFGVATEESAEPLSEDDFEMFYEVWERFDPHATQFIEYNK
LSEFADTLDPPLRIAMPNNLELISMDLPMVSGDRIHCLDILFAFTKRVLGEGGEMDILRG
QMEERFMASNPSKVSYEPITTTLRHKQEDSSATVIQRAFRRHVRKHAAVRAMITSGHNIQ
KDETLNKEDLVTDRPKEVSGADKSENEPSAAPQPPANSVTTNGNNKYEKDKSEREVVGKD
V
NT seq
4506 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaggtcctatgtgcaaatcttttttgtaccgtgtgtagttggacgttgcgggct
tctgggaaatactacatgctcttctttgtgctggtgattttcctcggttccttctacctc
atcaacctgatcctggctgtagtggctatggcctatgaggagcagtgccaggtcaccata
aaggaggcgaaggagaaggaggaggagtttcaggccattctggagcagctgaagcggcaa
caagaggaagctcaggcattagcaacagcagccactgcagagggcggggaggccagtaaa
aaagtcaccggcacagagagctcctctgaagcctctaagcttagctccaaaagtgccaaa
gagagacgcaacaggagaaagaaaagaaaggaggaggagggcaaaggtgctgacgagcag
tttcctaaatccgagtcacaggacagtatgaagaaaggtcgctgccgcttctctgtggac
gcaaaccagctcacctacgacatgaaatgctcgtccacacatcaggctgacaccactgac
acggactgcaaactggccgatggaggtacaagccatgagtgtatggagttcctcgagggc
ccagataccagacagagggctcttagtatagcaagtgtcataaccagcacagtggaggag
cttgaagagtcaaggcagaagtgtcctcctttctggtacgattttgctgacaccttcctc
atctgggaatgttgtccgcaatggctgaagttcaaggcgctggttaggctaatcgtgatg
gatccatttgcagacttaagcatcaccatttgcatcgtactcaacacagtgtttatggcc
atggaacatcatccaatgtctcccggatttggcttagtgctgtccgtgggcaatgtggta
ttcaccgtcatctttacagctgaaatggtcttcaagatcattgctttggacccatactat
tactttcagaagggatggaatatttttgatgcaatcattgtcagtttaagcttgttggag
ttttgtatgtcaagttctgggagcatgtctgttctgagatcattcagattgctgagagta
ttcaagttggctaaatcgtggcccactctcaacacgctgatcaaaataattggtaattcc
gtgggggctttgggcaacctgacgctggtgctggccatcatcgtgttcatctttgctgtg
gtcggcatgcagctgtttggaaaatactacacactacatgtgcataaaatttctgacgac
tgcaatccccgttggcacatgaaggacttcttccattcattcctcattgtgttccgagtg
ctttgtggagagtggatagagacaatgtgggactgtatggaggtggctgggatgcccatg
tgcatcattgtctacatgatggtcatggttattggaaaccttgtggtgctgaaccttttc
ctggccctgctgctgagctcattcagtgccgacaacctggcagcgacagaagatgacagt
gacaccaacaatttgcagatcgccattgctcggattcacagaggcattgcctacgccaag
tccatgctccgaagtggcttcagcagtgcctgtctcaagtgtgtgaagaaagggaagggt
gaggacaaatcacaggaggagcttcacaaacctttagggccaaatggtgtccccaaccat
accatcaaagattttcctagaaatggcaatggggatgtgaccggagtggacaaaagtgga
gacaagtacatcgtcagcagcaagagtgatgattccataatgtctttcatcaacaatccc
agtctgactatcactgttcctattgctgtgggagagtctgactttgaaaacctcaatacg
gaggacttcagcagtgcctcatctgatgtagcatgccatgtgaatatagatgacgataac
cagtccagctcctccgagggcagcacagtggatggtagtctagtcggagagggaaaagag
caagtagacgttgaactggaagaatacattgaacctgatggctgctttcctgatgccttt
gtgcaaaagttccgttgttgtcaggtaaatgtggatgtgggcatgtggaaaaggtggtgg
acacttagaaagacctgttaccggatcgtggagcacaactggtttgagacgttcatcatc
ctcatgatcctgctgagcagtggagcactagcctttgaagatgtctacattgagaggaag
aaaaccattaaaacagtgttggagtttgcagacaaaatcttcacctacgtcttcattctg
gagatgttactaaagtgggtggcgtatggatttgccaagtatttcacaaatgcctggtgc
tggctggacttcctcattgttgatgtctcagtggtcagcatggtagccaatgccattgga
tattccgatctcggtgccatcaagtctctgagaaccctgcgagcactgaggcccctgcga
gccctgtcacggtttgaaggcatgagggtggttgtcaacgccttgctgggagccattccc
tccattttcaatgtgctgctggtatgtctcatcttctggctcatcttcagcatcatggga
gtcaatttatttgctgggaagttctactcctgtgtgaacaggaccacaaataagcctttc
gatacttcagaggtgcgacatgttaacgactgtatccgtttgggtcctgactatcgctgg
aagaattacaaagtaaactttgacaacgttgccttgggttaccttgcattgctggaagtg
gctacattcaagggctggatgggcatcatgtatagtgctgtggactctcgaaataagaca
ggtttacaaccaatatttgagaacaacctgaagatgtacctgtattttgttgttttcatc
atatttggagccttcttcacactcaatctcttcattggggtcatcatagacaatttcaat
cagcaaaagaaaaagctaggaggtcaagatatcttcatgactgaagaacagaagaaatac
tacaatgccatgaaaaagttggggtcaaagaaaccacaaaaacctatacctagaccgtcg
aacaaaattcaagggtacatcttcgacttcaccacaaaacaagcatttgatattgtaata
atggttctgatatggcttaatatggtaaccatgatggtggaaactgatgaccagtctgag
acacaggaaaacgttctccagaagattaacatagtgttcattgtcatattcagtggagag
tgtctactgaagatgatctcgcttcgccaatacttttttacaaatggttggaatgttttt
gatttcatcgtagtcatcctgtcgatcattggtgtgttcctctcaaagttgattgagaag
tattttgtttcgccaaccttgttcagagtcatccgactggctcggatcggccgcgttctc
cgccttattaaaggcgccaaaggaatccgcacactcttgtttgccttgatgatgtctctt
ccggccttgttcaacatcggtctcttgctgttcctggtgatgtttatctatgccatcttc
ggcatgtcaaactttgcctacgtcaagagggaagacggcattgatgaccttttcaatttt
gagacatttggcaacagcatgatctgtttgttccagatcaccacctcagcagggtgggat
ctcctactatcacccattcttaacaaactcccagatgactgcaacagttccatggagcat
cctggcagttctgtgaaaggagactgtggaaaccctcctgtaggaattgccttctttgtg
agctacattatcatatgtttcctgattgtggtgaatatgtacatcgcagtcattctggaa
aacttcggtgtggccactgaggaaagtgcggaaccactaagtgaggatgattttgaaatg
ttttatgaagtctgggaacggtttgatccccatgcaacacagtttattgagtacaataag
ctgtcagaatttgcagatactctggacccaccattacgtatagccatgcctaacaacctc
gaattgatctctatggatctacctatggtgagtggtgatcgcattcactgcctggacatt
ctgtttgcattcacaaagcgtgttctgggtgagggtggggagatggacatcctaaggggg
cagatggaggagcgcttcatggcctccaatccctccaaagtgtcctatgagcccatcacc
actaccctccgccataaacaggaggactcgtcagccactgtcatccagagagcattcaga
cgtcatgtaaggaagcatgctgctgttagggccatgataacatccggtcataacattcaa
aaggatgaaacactcaacaaagaggatctggtcacagacagacccaaagaggtttctggt
gctgataaaagtgaaaatgaaccttcagcagcaccccaacctccagctaacagtgtgaca
acaaatggaaacaacaaatatgaaaaagacaaaagtgaaagggaggttgtgggcaaagat
gtataa
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integrated database retrieval system
