Acanthopagrus latus (yellowfin seabream): 119031692
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Entry
119031692 CDS
T08233
Symbol
trpv1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119031692 (trpv1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
alat04040
]
119031692 (trpv1)
Ion channels [BR:
alat04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
119031692 (trpv1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_5
Ank_3
Ion_trans
Motif
Other DBs
NCBI-GeneID:
119031692
NCBI-ProteinID:
XP_036976209
EnsemblRapid:
ENSALTG00010009644
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Position
13:12510889..12525057
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AA seq
787 aa
AA seq
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MDRAQRFDFSLESDDRTEEEKLWQKAGKKSGLASSLGLGQESPKAPMDTDYQEEMEKTKP
QIRFNLHFDKAIRGETETDNKRDSRTFNIDRLFEAAASRDTRKLAGLHQYLHQNMKKLSD
SLYQSYGKTALMKALLHLRDGKNETVELLIDISEKMGDIKKFVDSAYTNSYYKGQTALHI
AIERRSISYVKLLVSKGADVHAKACGIFFQQHDGPNFYFGELPLSLAACTNQPDIVDFLM
ENEHQRADAQMTDSQGNTVLHALVVVADNSKENTEFITSMYDSILTTTARLHPKLKLEDI
ANNQGLTPLKMAAKTGKIGLFSHILKREFQESHTKHLSRKFTEWVYGPVTCSLYDLASVD
SYEDNSVLDILVYGSDIPNRHDMLQTEPLSRLLESKWKMFGRGMFCLNFLVYLLYLVIFT
IVAYNRRDGKNPFGIEHTTNGYLYITGQLLTALANIYFFIIGILDMRRKRPKLQTLLIDG
YYEILFFLQGILFLLAATLYLCKRQEYLSFYVLCLALSWVNLLYFSRGDIHMGIYSVMIQ
KMILSDILRFLFVYVVFLFGFSAAVVTLLIEPPSRNLTKTPEKGRIFGQVDSNEPCIKPT
YRNISYTTMELFKFTIGMGDMEFIEDYQYKEVFYLLLISYIVLTYILLLNMLIALMNRTV
ERTALESSSIWQLQRAITILDMEKRLPCCLRKGFRCGVEKKLGTALGDDRRRCFRVEEVN
WNKWNINLGKINEDPGCWDRVQQPGSDAPPVRHHRGRSWRGFFIEGSRRWRQTPESTEMN
RLHTPPI
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggatagagcacagaggtttgatttctctctggagtcggacgacaggaccgaggaagag
aaattatggcagaaagctgggaagaagtccggactggcttcttccctgggtttgggccag
gagtcgcccaaagctcctatggacaccgattaccaggaggaaatggagaagacgaagcct
caaatcagattcaatctccactttgacaaagcgatccgaggcgagacggagaccgacaac
aagagggacagcaggacgttcaacatcgacaggctgtttgaagcagcagccagcagggac
acccgaaagctggccggccttcatcagtacctgcaccagaacatgaagaaactctccgat
tctttgtatcagtcctatggtaaaaccgccctgatgaaggccctgctgcacctcagagac
ggcaagaacgagacggtggagctgctaatcgacatttcagagaagatgggcgacatcaaa
aagtttgtggattcagcctacaccaacagctactacaaaggccagacggccctccacata
gccatcgagaggaggagcatttcctacgtgaagctgctggtcagtaaaggcgcagacgtt
cacgccaaagcctgcgggattttcttccagcaacacgacgggcccaacttctactttggt
gagctgcctctgtccctggcagcctgcaccaaccagcccgacatagtcgacttcctcatg
gagaacgagcaccagcgagccgacgcccagatgacggactctcagggcaacacggtgctg
cacgccctggtggtggtggccgacaactccaaggagaacacggagttcatcaccagcatg
tacgacagcatcctcacgaccactgcccggctgcaccccaagctgaagctggaggacatc
gcgaacaatcaggggctcacgcctctcaaaatggctgccaagaccggcaagatcgggctt
ttttcacacatcctgaagagggagttccaagagagccacaccaaacacttgtcccgtaaa
ttcaccgagtgggtttacgggcccgtcacctgctccctgtacgacctcgcctctgtggac
tcgtacgaggacaactcagtactggacatactggtctacggcagtgacatccctaaccgc
cacgacatgctccagacggagcctctgagtcgcctgctggagtccaagtggaagatgttt
ggaagaggaatgttttgtctcaacttcctggtctacctcctgtacctggtcatcttcact
attgtagcctacaacaggagggatggaaagaatccgtttggcattgaacataccacgaac
ggttacctgtatattacaggccagctgctgacggcactggcaaacatctatttctttatc
atagggatcttggacatgaggaggaaacggccaaagctgcagacgttgctgattgacgga
tattatgagattcttttttttttgcagggcatcctcttcctgctcgcggccacgctgtat
ctatgcaagcgccaggagtacctcagcttctacgtgctgtgtctcgctctcagctgggtg
aacctgctctacttctccaggggcgacatacacatgggcatctacagcgtcatgatacag
aagatgatcctcagcgacatcctgcgctttctttttgtctacgtcgtcttcctgtttgga
ttttcagcggcggtggtcacgctgctcatagagcctccttcgagaaacctcaccaaaact
ccggagaaggggcgtatcttcggtcaagtcgacagcaacgagccgtgtataaaacccacc
tacaggaacatctcctacaccacaatggagctcttcaagttcaccatcggcatgggcgac
atggagttcatcgaggactaccagtacaaggaggtcttctacttgctcctcatcagctac
atcgtcctcacctacatcctgctgctcaacatgctcatcgccctcatgaaccgcacagtg
gagaggaccgccctggagagcagcagcatctggcagctacagagggctatcaccatcctg
gacatggagaaaaggctgccgtgctgtctgaggaaggggtttcgctgtggggtggagaag
aagctgggcaccgctctcggggatgaccgtcgccggtgtttcagagtggaggaagtcaac
tggaacaaatggaacatcaacctgggcaaaatcaatgaggatcccgggtgctgggatcgt
gtccagcagcctggctcagacgccccgccggtcagacatcacagagggaggagctggaga
ggcttcttcatagagggcagccggcggtggcggcagacaccagagtccacagagatgaac
cgtctgcacaccccaccgatctga
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