Acanthopagrus latus (yellowfin seabream): 119033198
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Entry
119033198 CDS
T08233
Symbol
xpo1b
Name
(RefSeq) exportin-1 isoform X1
KO
K14290
exportin-1
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03008
Ribosome biogenesis in eukaryotes
alat03013
Nucleocytoplasmic transport
alat03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119033198 (xpo1b)
03008 Ribosome biogenesis in eukaryotes
119033198 (xpo1b)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
119033198 (xpo1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alat03019
]
119033198 (xpo1b)
03009 Ribosome biogenesis [BR:
alat03009
]
119033198 (xpo1b)
03016 Transfer RNA biogenesis [BR:
alat03016
]
119033198 (xpo1b)
03036 Chromosome and associated proteins [BR:
alat03036
]
119033198 (xpo1b)
Messenger RNA biogenesis [BR:
alat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
119033198 (xpo1b)
Ribosome biogenesis [BR:
alat03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
119033198 (xpo1b)
Pre-60S particles
119033198 (xpo1b)
Transfer RNA biogenesis [BR:
alat03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
119033198 (xpo1b)
Chromosome and associated proteins [BR:
alat03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
119033198 (xpo1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
TPR_TNPO3_IPO13_2nd
BID
BspA_v
Motif
Other DBs
NCBI-GeneID:
119033198
NCBI-ProteinID:
XP_036978850
LinkDB
All DBs
Position
15:complement(16315542..16344610)
Genome browser
AA seq
1142 aa
AA seq
DB search
MVLAVHHIAQLKKCNLRNTAVLFFAVYHSKSRRSSTESLKWTQNHHFYTSHCAHVRECHA
AFTLMESSMPAIMTMLADHAAQQLLDFNQKLDINLLDNVVNCLYHGVGPQQRMAQEVLTH
LKEHPDAWTRVDTILEFSQNMNTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIK
TSSDASNVEKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMVILK
LLSEEVFDFSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRF
LNWIPLGYIFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVSQYEEQFVTLFTLTMC
QLKQMLPLNTNIRLAYANGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRLNLRETLMEALH
YMLLVSEVEETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSGNQHFDVPPRRQLYLPV
LSKVRLLMVSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADT
ERIMTEKLHNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKR
GKDNKAIIASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIA
QKCRRHFIQVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQEH
LIEKYMLLPNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGR
IYLDMLNVYKCLSENISAAIQTNGKGGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDP
QMVGENFVPPLLDAVLIDYQRNVPAAREPEVLSTMATIVNKLGGHITSEIPQIFDAVFEC
TLNMINKNFEEYPEHRTHFFYLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNV
ADTGLQILYTLLQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYM
FNLVEEGKITTVLNPASPTNNQVFIQEYVANLLKTAFPHLQDAQVKVFVTGLFSLNQDIP
AFKEHLRDFLVQIKEFAGEDTSDLFLEEREASLRQAQEEKHKIQMSVPGILNPHEIPEEM
CD
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atggtacttgcggttcatcacatcgctcagctcaaaaagtgtaacctgcgtaacacggcc
gtcttgtttttcgcggtgtatcacagtaaaagtaggcgaagctccacagagagtctaaag
tggacgcagaatcatcacttttatacctcgcactgtgcgcacgtgcgtgagtgccacgct
gcatttacattaatggagagctctatgccagcaattatgacaatgttagcagaccatgca
gcacagcagctgctggacttcaaccagaaactggatatcaacctgctggataatgtggtg
aactgtctatatcatggagtgggaccacagcaaagaatggcacaagaagtgttaacacac
ttaaaagagcacccagatgcatggacgagagtggacaccatcctcgagttctcccagaac
atgaacaccaaatactatgctcttcagattctggaaacggttatcaaaacaagatggaag
attcttcccaggaaccagtgtgaaggtataaaaaaatatgtagttggtctcattatcaag
acttcatcagatgcatcaaatgtggagaaagaaaaggtgtacattggaaagctgaacatg
atccttgttcagatcctgaagcaggagtggcccaaacactggcccaccttcatcagtgac
atcgtgggggcgagtcgtaccagtgagagcctttgtcagaacaacatggtcattctcaag
ctgctcagcgaggaggtcttcgacttctccagtggtcagatgacccaggtcaaggccaaa
cacttaaaagacagcatgtgcaatgaattctcccagatattccagctctgtcagtttgtt
atggaaaattcccagaacgcccccctggtccacgcaactctggagacgcttttacgtttt
ctcaactggattcctttgggatatatctttgaaaccaaactgatcagcacattggtgtat
aagttcttgaacgtgcccatgtttcgcaacgtgacactgaagtgcctcacagagattgcc
ggtgtgagcgttagccagtatgaggagcagtttgtcacactcttcaccctgaccatgtgt
caactcaaacagatgctgcctctgaataccaacattcggctggcctacgccaacgggaaa
gatgacgagcagaacttcattcagaacctcagtctgttcctttgtacgttccttaaagag
cacgggcagcttattgagaagcggctcaacctcagagaaacgttaatggaggccctccac
tacatgctgctggtgtcagaggttgaagagaccgagatctttaagatttgtctggagtat
tggaaccatttggctgctgagctctacagagagagtcccttctctacatccacgtccccc
ctgctctctggcaaccagcactttgacgtaccgccacgcagacagctctatcttcctgtt
ctctccaaggtgcgtctgctgatggtaagtcggatggcaaagccagaggaggtgttggtg
gtggagaatgaccagggagaggtggtcagagagttcatgaaggacaccgattctatcaac
ctctacaagaacatgagggaaacccttgtgtacctcactcatctggactatgcagacaca
gagcgcataatgacagaaaagcttcacaaccaggtgaacggtactgagtggtcctggaag
aaccttaacacactgtgctgggccatcggctccatcagcggggctatgcacgaggaggat
gagaagaggttcctggtcactgtcatcaaggatcttttgggtctgtgcgagcagaagaga
gggaaggacaacaaggccatcatagcctccaacattatgtacattgttggccagtatcca
cgctttctcagagctcactggaagttcctcaaaactgtggtcaacaaactctttgagttc
atgcatgagacccatgatggtgttcaggacatggcctgtgacaccttcatcaagatcgcc
cagaagtgccggcgccattttatccaggtgcaggtgggagaggtgatgcccttcatcgac
gagattcttaataatatcaacaccatcatctgtgaccttcagcctcaacaggtgcacaca
ttctacgaggcagtaggttatatgatcggggcccagacagatcaggctgtacaagagcac
ctgatagaaaaatacatgctgctgcccaatcaagtgtgggacagcatcatccagcaggcc
acgaagaacgtggacatcttgaaggacccagagactgtgaaacaactgggcagcatcctg
aagaccaacgtcagagcctgtaaggctgtgggacacccgtttgtcatccagctgggacgg
atctaccttgacatgctcaacgtctacaagtgcctcagcgagaacatctctgctgccatt
cagacaaatggtaagggaggtgagatggtgacaaaacagcccttgatccgaagtatgaga
acggtgaaacgagagacattgaaactgatctccggctgggtcagccgatcaaacgaccca
cagatggtaggggagaactttgttccaccgctgctggacgccgtcctcattgactaccag
cgcaatgttcccgctgcccgtgagcctgaggtcctcagcaccatggcaaccattgtcaac
aagctggggggacacatcaccagtgagatacctcaaatctttgatgccgtcttcgagtgc
accctgaacatgatcaacaagaactttgaggagtatccagaacacaggacccacttcttc
tacttactgcaagctgtaaactctcactgcttccccgcgttcctcgccatcccccctgcc
cagttcaaactggtgctggattccatcatctgggccttcaaacacaccatgaggaatgtg
gctgacactggcctgcagattctgtacacgttgctgcagaatgttgcccaggaggaagca
gccgctcagagtttctaccaaacgtacttctgcgatatcctacaacacatcttctctgtg
gtcaccgacacatcacatactgccggtctgacgatgcacgcgtccattctggcctacatg
ttcaacctggtggaggaggggaagatcactacagtgctaaaccccgccagccccaccaac
aaccaggtgttcatccaggaatacgtggccaacctgctcaagactgccttccctcaccta
caagatgctcaggtgaaggtgtttgtgaccgggctgttcagcttaaaccaggacattcct
gccttcaaggagcacctaagggacttcctcgtccagataaaggagtttgcaggcgaggac
acttcagacctgttcctggaggagagggaggcgtcgcttcgtcaagcccaggaggagaaa
cacaagatccagatgtcagtcccgggcatcctgaaccctcacgagatccccgaggagatg
tgtgactga
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integrated database retrieval system
