Acinetobacter lactucae: OTEC02_17335
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Entry
OTEC02_17335 CDS
T05220
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
alc
Acinetobacter lactucae
Pathway
alc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
alc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
OTEC02_17335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alc03021
]
OTEC02_17335
03400 DNA repair and recombination proteins [BR:
alc03400
]
OTEC02_17335
Enzymes [BR:
alc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
OTEC02_17335
Transcription machinery [BR:
alc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
OTEC02_17335
DNA repair and recombination proteins [BR:
alc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
OTEC02_17335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
ARD30370
UniProt:
A0A151YPQ9
LinkDB
All DBs
Position
complement(3658907..3662995)
Genome browser
AA seq
1362 aa
AA seq
DB search
MAYSYTEKKRIRKNFGKLPQVMDAPYLLSIQVDSYRTFLQDGKTPKNREDIGLQAAFRSV
FPIESYSGNAALEFVEYSLGKPEFDVRECILRGSTYAAPMRVKIRLIIKDRETKSIKDVR
EQEVYMGEIPLMTENGTFVINGTERVIVSQLHRSPGVFFDHDKGKTHSSGKVLYSARIIP
YRGSWLDFEFDAKDLVYVRIDRRRKLLATVVLRALGYNNEQILNLFYEKVPVYLDMGSYQ
IDLVPERLRGEMAQFDIADNDGKVIVEQGKRINARHVRQMEAAGLTKLSVPDEYLYERIT
AENITLRDGEVIAANTLLSHEVMVKLAEGGVKQFNILFTNDIDRGSFVADTLRADTTAGR
EEALVEIYKVMRPGEPPTKEAAENLFNNLFFSSERYDLSPVGRMKFNRRLGRPYEVGTDQ
KSREVEGILSHEDIIDVLRTLVEIRNGKGEVDDIDHLGNRRVRSVGEMTENQFRVGLVRV
ERAVKERLSQAETDNLSPQDLINAKPVAAAIKEFFGSSQLSQFMDQNNPLSEITHKRRVS
ALGPGGLTRERAGFEVRDVHQTHYGRVCPIETPEGPNIGLINSLSVYAKANDFGFLETPY
RKVVDGRVTDAVEYLSAIEEVGTVIAQADSAVDKDGNLTEEFVSVRHQGEFVRMPPEKVT
HMDVSAQQVVSVAASLIPFLEHDDANRALMGSNMQRQAVPTLRADKPLVGTGMEANVARD
SGVCVIANRGGAIEYVDASRIVIRVNEDEMIAGEAGVDIYNLIKYTRSNQNTCINQNIIV
NLGDKVARGDILADGPSTDMGELALGQNMRVAFMTWNGYNYEDSILLSERVLQEDRLTSI
HIQELSCVARDTKLGAEEITADIPNVGEAALSKLDESGIVYIGAEVTAGDILVGKVTPKG
ETQLTPEEKLLRAIFGEKAADVKDSSLRVPSGTKGTVIDVQVFTRDGLEKDDRALAIEKA
QLDAYRKDLKEEYKIFEEAARERVIRLLKGQESNGGGSTKRGDKLVEDVLSGLELVDLLE
IQPADEAIAERLTQIQVFLKEKSAEIDEKFAEKKRKLATGDELTTGVLKVVKVYLAVKRR
IQPGDKMAGRHGNKGVVSNILPVEDMPHDANGVPVDIVLNPLGVPSRMNVGQILETHLGM
AAKGLGDKIEKMLKEQRTVLELREFLDKIYNKVGGEQEDLDSLTDAEVLALSGNLRAGVP
LATPVFDGAEEGQIKDLLELAGISRTGQTVLFDGRTGEQFDRPVTVGYMYMLKLNHLVDD
KMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVEGR
TRIYKNIVDGNHYMDPGMPESFNVLTKEIRSLGINIELKNGD
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atggcatactcatataccgaaaagaaacggatccgtaagaattttggtaaattgccccaa
gtaatggatgcaccgtacttactatcgattcaggtcgattcgtacagaacattcttgcaa
gatggcaaaactccaaaaaaccgcgaagatatcggtctccaagccgcatttcgttcagtt
tttcctatcgaaagttattctggcaatgctgctttagaatttgttgagtatagccttggt
aaacctgagttcgatgtacgcgaatgtattcttcgtggttcgacttatgcggcaccaatg
cgcgttaaaattcgtttgattattaaagatcgcgaaactaaatcaattaaagacgtacga
gaacaagaagtctatatgggtgaaattccactcatgactgaaaacggtacattcgtcatt
aatggtactgagcgtgtaatcgtatctcaattacaccgttcaccaggcgttttctttgat
cacgataaaggtaaaacccactcaagtggtaaagtgttgtattcagcacgtattattcct
taccgtggttcatggttagacttcgaatttgatgcgaaagacttagtttacgtacgtatt
gaccgtcgtcgtaaattacttgctactgttgtattacgtgcactgggttataacaacgaa
caaatcttgaatttgttctatgaaaaagtacctgtgtatcttgatatgggcagttaccag
attgatctagtccctgaacgtttacgtggggaaatggcgcaatttgatattgctgacaat
gacggtaaagttattgttgagcaaggtaagcgtattaatgctcgtcacgtacgtcaaatg
gaagctgctggtttaacaaaactttcagttccagatgaatacttatatgagcgtattact
gctgaaaatattactttacgtgatggtgaagtaattgctgctaatactttgttaagccat
gaagttatggtgaaactagcagaaggtggtgttaaacagttcaatatcttgtttacgaac
gatattgaccgtggttcgtttgttgctgacacattacgtgcagatacaacagctggccgt
gaagaagcattagttgaaatttataaagtaatgcgtccaggcgagccgccaacaaaagaa
gctgctgaaaacttattcaataacttattcttctcttctgagcgttatgacttatctcca
gtaggtcgtatgaagttcaaccgtcgtttgggtcgtccatacgaagttggtactgaccag
aaatcacgtgaagtagaaggtattttatcgcacgaagatatcattgatgtattacgtaca
ttagttgaaatccgtaacggtaaaggtgaagtcgacgatatcgatcacttgggtaaccgt
cgtgtacgttctgttggtgaaatgactgaaaaccaattccgtgttggtttggttcgtgtt
gaacgtgctgttaaagagcgtttaagccaagcagaaacagataacttgtctccgcaagat
ttaattaacgctaaaccagttgcagctgcaatcaaagaattctttggttcaagccagtta
tctcagttcatggaccaaaacaacccattatctgagattacccataagcgtcgtgtatca
gcgcttgggcctggtggtttaacacgtgaacgtgcaggctttgaggtacgtgacgtacat
caaactcactatggtcgtgtatgtccaattgaaacgccggaaggtccaaacattggtttg
atcaactcgctttctgtatatgcaaaagcaaatgacttcggtttcttggaaacaccttac
cgtaaagtggtagatggtcgagtaactgatgctgttgaatacctttctgctattgaagaa
gtaggtactgttattgcacaggccgattctgcagtagataaagatggcaacttaacagaa
gagtttgtttctgttcgtcatcaaggtgaattcgtacgtatgccaccagaaaaagtgacg
catatggacgtttctgctcagcaggttgtatctgttgctgcatcacttattccattcctt
gaacacgatgacgcgaaccgtgcgcttatgggttcaaacatgcaacgtcaggcagttcct
actctacgtgcggataaaccgcttgtaggtacaggtatggaagcgaacgttgcacgtgac
tcaggtgtgtgtgtgatcgcaaaccgtggcggtgcaattgaatacgtagatgcttctcgt
atcgttattcgtgtaaacgaagatgaaatgattgctggtgaggctggtgtagatatctac
aaccttattaaatatacgcgttctaaccagaacacttgtattaaccaaaatattatcgtg
aatttaggcgacaaagttgctcgcggtgatatcttggcagacggtccgtctacagatatg
ggtgagcttgcgcttggtcaaaacatgcgcgttgcgttcatgacttggaatggttacaac
tacgaagactcgatcttattatctgagcgtgtacttcaagaagaccgtttaacttctatt
catattcaagaattatcttgtgtagcgcgtgatactaagttaggtgcagaagaaattact
gccgatattcctaacgtgggtgaagctgcactttctaaacttgatgaatcaggtatcgtt
tatatcggtgctgaagttacagcaggtgacatccttgttggtaaagtaacgcctaaaggt
gaaactcagttaactcctgaagaaaaattgcttcgcgcaatctttggtgagaaagcagct
gatgttaaagattcatctttacgtgttccatctggtactaaaggtacagttattgacgtt
caagtcttcactcgtgatggcttagagaaagatgaccgtgcactagctatcgaaaaagca
cagcttgatgcttaccgtaaagacttgaaagaagaatacaagatctttgaagaagcagct
cgtgagcgtgtaattcgtttgcttaaaggccaagagtctaatggcggtggttcaactaaa
cgtggtgacaaactcgttgaagacgtgttatctggtttagagcttgttgatttgcttgaa
attcaaccagcagatgaagcaatcgctgagcgtttaactcaaattcaagtgttcttaaaa
gaaaagagcgcagaaattgacgagaaattcgctgagaagaaacgtaagcttgcaacaggt
gatgaattaacaactggcgtattgaaagttgttaaagtttacttagctgttaaacgtcgt
attcagcctggtgataagatggctggtcgtcatggtaataaaggtgttgtatctaacatc
ctacctgttgaagacatgccacatgatgctaacggtgtaccagtagatatcgtattgaac
ccgttgggcgtaccatctcgtatgaacgtgggtcagattcttgagactcacttgggtatg
gcggctaaagggcttggtgataaaatcgaaaaaatgttgaaagaacaacgtacagtttta
gaactgcgtgaattcttagacaagatttataacaaagtcggtggtgagcaagaagatctt
gacagcttaactgatgctgaagttttagctctttcaggcaacttgcgtgctggtgtgcct
ttggctactcctgtatttgatggtgctgaagaaggtcaaattaaagacttacttgagtta
gctggtatctctcgtactggtcaaacagtattgtttgatggccgtactggtgaacagttt
gatcgccctgtaactgtgggttacatgtacatgctcaaattgaaccacttggttgatgac
aaaatgcatgcgcgttcaactggttcttactctcttgttacacagcaaccgcttggtggt
aaagcacaattcggtggtcagcgtttcggtgagatggaggtctgggcactcgaagcttac
ggcgcagcatatactctccaagagatgttaactgttaagtcggatgacgttgaaggtcgt
acacgcatctataagaatattgtagatggtaaccattatatggatccgggtatgcctgaa
tcgttcaacgtattgaccaaagagatccgttctttaggtatcaacattgaactgaaaaat
ggtgattaa
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