Alcaligenes sp. NLF5-7: MID00_12825
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Entry
MID00_12825 CDS
T10407
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
alcn Alcaligenes sp. NLF5-7
Pathway
alcn00260
Glycine, serine and threonine metabolism
alcn00460
Cyanoamino acid metabolism
alcn00630
Glyoxylate and dicarboxylate metabolism
alcn00670
One carbon pool by folate
alcn00680
Methane metabolism
alcn01100
Metabolic pathways
alcn01110
Biosynthesis of secondary metabolites
alcn01120
Microbial metabolism in diverse environments
alcn01200
Carbon metabolism
alcn01230
Biosynthesis of amino acids
alcn01240
Biosynthesis of cofactors
alcn04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
alcn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
MID00_12825
09102 Energy metabolism
00680 Methane metabolism
MID00_12825
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
MID00_12825
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
MID00_12825
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
MID00_12825
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
MID00_12825
Enzymes [BR:
alcn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
MID00_12825
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
UTM00381
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Position
2792000..2793289
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AA seq
429 aa
AA seq
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MYDNTLSLAEFDKELAQAIQGEESRQEDHVELIASENYASPLVMQVQNSVFTNKYAEGYP
DKRYYAGCEFVDVAERLAIERLKAVFDCDYANVQPHAGAQANTAVFLALLKPGDTVMGMN
LAQGGHLTHGNPINISGRLYNIVPYGVDTRTGLIDYDEMERIAIETKPKMLIGGFSAYSR
VKDWARMRQIADKVGAWFWVDMAHVAGLVAAGEYPSPLPHAHVVTSTTHKTLRGPRGGVI
MAKGQSEDFYKRLNSAVFPGVQGGPLMHLIAAKAIAFKEALQPEFRTYQQNVVRNARAMA
AVLMQRGHNIVSGGTDNHMMLINLSTKPYTGQEASDALADAYITVNKNSVPNDPRSPMVT
SGIRIGTPAVTTRGFTVKDCEQLAHYLCDVLDAYEAGTLDKVKHEIREKIVNLCRSYPVY
QVQTEPAQL
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacaacacactcagcctggctgaattcgacaaggaattggctcaggccattcag
ggcgaagaaagccgtcaggaagatcacgtagaactgattgcctcggaaaactacgccagc
cctttggttatgcaggttcagaactccgtgtttaccaacaaatacgccgagggttacccg
gacaagcgttactacgccggttgtgaatttgtagatgtagccgaacgtctggctatcgag
cgtctgaaagcggtgttcgattgtgattacgccaacgtacagcctcatgctggagcgcag
gctaacactgcagtattcctggctttgctcaaaccgggcgatacggtgatggggatgaac
ctggctcagggtggtcacctgacccacggtaaccccatcaacatttccgggcgtctttac
aacattgttccttacggagttgatacccgaaccgggctgatcgattacgacgaaatggag
cgcattgctatcgagaccaagcccaaaatgctgattggtggtttctccgcctattcgcgt
gtgaaggattgggcgcgtatgcgccagattgctgacaaggtcggtgcctggttctgggtg
gatatggcccacgtagctggtctggtggcggcgggtgagtaccccagccccttgccacac
gcccatgtagtcaccagcacaacgcacaaaaccctgcgcggtccacgtggtggcgtgatc
atggctaaagggcaaagcgaagatttctacaaacgtctgaattccgctgtattccccggc
gtgcaaggcggcccattgatgcacttgatcgcggccaaagccattgctttcaaagaggct
ctgcagccggaattccgtacctatcagcaaaacgtggtgcgtaatgcccgtgccatggcg
gcggtactgatgcagcgtggtcacaacatcgtgtcaggcgggacagataaccacatgatg
ctgatcaacttgtcgaccaagccctacaccgggcaagaggccagtgatgccttggcagat
gcctatatcaccgtgaacaagaattcggtgcccaatgatccccgttcgcccatggtgacc
tcgggtattcgtatcggaacgccggctgtaacaacacgtggctttacggtgaaggactgc
gagcagctggcgcattacttgtgtgatgtgcttgatgcctacgaggctggcactttagat
aaggtcaagcacgagattcgggaaaaaattgtgaacctgtgccgaagctatccggtgtat
caggtgcagacggagccagcgcagctgtga
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