Alcaligenes sp. NLF5-7: MID00_17095
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Entry
MID00_17095 CDS
T10407
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
alcn Alcaligenes sp. NLF5-7
Pathway
alcn01501
beta-Lactam resistance
alcn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
alcn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MID00_17095
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
MID00_17095
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
alcn02000
]
MID00_17095
01504 Antimicrobial resistance genes [BR:
alcn01504
]
MID00_17095
Transporters [BR:
alcn02000
]
Other transporters
Pores ion channels [TC:
1
]
MID00_17095
Antimicrobial resistance genes [BR:
alcn01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
MID00_17095
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
MID00_17095
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
MID00_17095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
UTM01192
LinkDB
All DBs
Position
3718495..3719958
Genome browser
AA seq
487 aa
AA seq
DB search
MSSMFLRSPLVLAVAFALSACSLAPKYERPDSPVPAQFPLAQQGQADAAQAADLGWREFF
TDPRLHALIEQALENNRDLRIATQRIEEARAQYGVARSDQLPSIGVQAAEQATHTPAELR
PGGPNSAPVTRTFQAGVGITAFELDFFGRVRDLARAAQEQYFATEQAQRTAHIALVAGTA
EAYFKVRTAEELHALMSNTLRSRQETLRLVQSSYDAGTVSALDLNQAKVQYNTVRSDMQA
VERDRQRALNALQVLLGGEIPADLPAGLPFTRAQLMPSLPVGLSAELLERRPDILAAEHA
LRGSNYSIGAARAAFFPRLSLTGLLGFMSPELGGLFSSGNRYWQFQPQITMPLLSGSTWA
NLDLAEARRDIAISQYEKTIQEAFREVADALAGEATYGQQIDALQEVDQAASESLRLAKL
RYEVGIDSFLQVQTAEVSLYGTRQAYIQTGLASLMNRVELYKALGGGWTAETVKPETKTQ
ATGTAPE
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtctagcatgtttttacgtagccccttggtgctggccgtggcgtttgccttgtcggct
tgctccttggcaccgaagtacgagcgtcctgattctcccgtgcccgcacaattccctctg
gcccagcagggccaggcggatgcggcacaggctgctgatctgggctggcgtgaattcttt
acggatccgcgtctgcatgccctgatcgagcaggctctggagaataaccgcgatctgcgt
attgccacccagcgcatcgaggaagctcgcgcgcaatacggcgtggcacgcagtgaccag
ttgcccagcattggtgtgcaggcggccgagcaggccacccacacaccggctgagctgcgt
cctggtggcccaaattcggcccccgtaacccgtacgttccaggccggtgtcggtatcact
gctttcgagctggacttctttggtcgagtgcgtgatctggcccgtgctgctcaagaacag
tactttgccaccgagcaggctcagcgtaccgcccatatcgccctggtggcgggcaccgcc
gaagcctacttcaaggtacgtactgccgaagaactgcatgctttgatgagcaataccttg
cgcagccgtcaagagacattgcgcctggtgcagtcttcttacgatgccggtacggtgtcg
gcgctggacctgaaccaggccaaggtgcaatacaacaccgtgcgttccgatatgcaggct
gtcgagcgtgatcgtcagcgtgcactcaatgccttgcaggtcttgttgggcggtgaaata
ccggctgacttgccagcaggcttgccctttacccgtgctcagctgatgcctagcttgcct
gtagggttgtcggcagaattgctggagcgtcgtcctgacattctggccgccgagcacgcc
ttgcgtggttccaactacagcatcggggcagcacgcgctgctttcttcccgcgtctgagc
ctgaccggtctgctgggcttcatgagccccgagctgggtggtctgttcagttcgggtaac
cgttactggcaattccagccgcaaattaccatgccgctgctctcgggcagtacctgggcc
aatctggatctggccgaggctcgtcgtgacattgcgatcagccagtatgaaaaaaccatt
caggaagccttccgcgaagtggctgatgctctggcgggcgaagccacctacggtcagcag
atcgacgccttgcaagaggttgatcaggctgccagcgaaagcttgcgtctggccaagctg
cgttacgaagtgggtatagacagcttcctgcaggtgcaaacggcggaagtcagcctgtac
ggtacgcgtcaagcctatattcagactggcctggcatccctgatgaaccgggtcgagttg
tacaaggctttgggtggcggctggacagctgaaaccgtcaagcctgaaacaaagacccag
gccactgggacagcaccggagtaa
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