Agrobacterium larrymoorei: CFBP5473_14345
Help
Entry
CFBP5473_14345 CDS
T06268
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
alf
Agrobacterium larrymoorei
Pathway
alf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
alf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CFBP5473_14345 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alf03400
]
CFBP5473_14345 (mutM)
Enzymes [BR:
alf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CFBP5473_14345 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CFBP5473_14345 (mutM)
DNA repair and recombination proteins [BR:
alf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CFBP5473_14345 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
IBR
Zn_Tnp_IS1595
Motif
Other DBs
NCBI-ProteinID:
QCI98970
UniProt:
A0A4D7E2P4
LinkDB
All DBs
Position
circular:2965927..2966820
Genome browser
AA seq
297 aa
AA seq
DB search
MPELPEVETVRRGLAPTMEGARIEKLELARPDLRFPFPEGFSEMVEGHEIVSLGRRAKYL
LIELDNGLTIVSHLGMSGSFRIESAMAAAETPGEFHHPRSKDGKHDHVIFHLSRGGIHSR
IIYNDPRRFGFMHLVRRADIDLYPAFAELGPEPTGNTLSADYLAGRFDGKSQPLKSTLLD
QKVIAGLGNIYVCEALWRSHLSPLRAAGTLVTKTGRPKAALTELTQKIRDVIADAIAAGG
SSLRDHIQTDGSLGYFQHSFSVYDREGHACPSPDCGGTVERITQSGRSTFYCAACQK
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattgcccgaagtggaaaccgttcgacgcgggcttgcgcccacgatggaaggc
gcgcgcatcgaaaagctggaacttgcccgtccggacctgcgcttcccttttcccgagggt
ttctcagagatggtcgagggccacgagatcgtttcacttggacgacgggcgaaatatctg
ctgatcgagctcgataacggcctgaccatcgtctcccacctcggcatgtccggttcgttt
cgtatagaaagcgccatggcggcggctgagacacccggcgagtttcatcacccgcgttcc
aaggatggaaagcatgaccatgtcatcttccatctatcgcgcgggggcattcacagccgc
atcatctataatgacccgcgccgcttcggcttcatgcatctcgtgcgccgcgcggatatc
gatctctatccagccttcgccgaactcggcccggagccgaccggcaatacgctgagcgcg
gattatctggcgggccgcttcgatggcaagagccagcccctgaagagtacccttctcgac
cagaaggtgattgcagggcttggcaatatctacgtctgcgaagcgctctggcgctcgcat
ctctcgccgctgagggccgcgggaacgctggtgaccaaaaccggaaggcccaaggcagcg
ctgaccgagctgacacagaagattcgcgatgtgattgccgacgccattgcagcaggtggc
tcatcgctgcgcgatcacatccagacagacggatcgcttggttatttccagcactcattt
tccgtctatgatcgggaaggccatgcttgcccttcgcccgactgcggcggtacggtcgag
cgcatcacgcagagcgggcgctccaccttctattgtgcggcctgccagaaatag
DBGET
integrated database retrieval system
