Aquicella lusitana: AQULUS_15940
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Entry
AQULUS_15940 CDS
T06205
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
alg
Aquicella lusitana
Pathway
alg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
alg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AQULUS_15940 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alg03021
]
AQULUS_15940 (rpoA)
03400 DNA repair and recombination proteins [BR:
alg03400
]
AQULUS_15940 (rpoA)
Enzymes [BR:
alg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AQULUS_15940 (rpoA)
Transcription machinery [BR:
alg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AQULUS_15940 (rpoA)
DNA repair and recombination proteins [BR:
alg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AQULUS_15940 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
VVC73844
LinkDB
All DBs
Position
1:complement(1704849..1705850)
Genome browser
AA seq
333 aa
AA seq
DB search
MQSNPFDFLTPREIAVETISPYHAKITLEPLERGFGHTLGNTLRRILLSSMPGAAIVEVK
IDGVLHEYGAIPGVQEDVVEILLNLKGVAIKLHGRQEVTLKLSKKGPGPIIAGDIEPEHD
VEVVNPNHVIGHLNENGSINMTIRVVLGRGYQPAATRVRKSEGKTTIGALHLDASFSPIR
RVAYTVENARVEQRTDLDKLIIDLETNGTLDPEEAIRRSATILQQQLAAFVDLQSAPLVQ
EKSAHEESVNPIYYRPVDDLELTVRSANCLKAENIFYIGDLVQRAEADLLKTPNLGKKSL
TEIKNVLAAHGLSLGTKIEGWRTPTAQDNEGKK
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagcaatccatttgattttttgacgcctcgtgaaattgctgttgagacgatctca
ccgtatcacgcgaagatcacactcgaaccgctagaacgtggttttgggcataccttagga
aacacattgcgcaggattttattatcatccatgccaggcgctgctatcgttgaagtaaaa
atcgatggtgtactgcatgaatacggtgccattccaggcgtacaggaagatgtggttgaa
attcttctgaacttgaagggcgtcgcgataaagctccacggccgtcaggaagttacatta
aaacttagcaagaaaggcccaggacctattatcgctggtgatatagaaccggaacatgat
gtggaagtggttaacccgaaccacgtcattggccatctcaatgaaaatggttccattaat
atgaccattcgggttgtgttgggtagaggttatcagcctgcagctacgcgtgtgcgtaaa
tctgaaggcaaaacgacgattggtgcgttgcatttggatgcgagctttagcccgattcgt
agggttgcctatacggtcgaaaacgcgcgtgttgaacagcgtaccgacttggacaaactc
atcattgacctcgaaacgaacggtactctggatccggaagaggcgattagacgttctgca
accattctgcagcagcagttggctgcttttgttgaccttcaatcggcgccattggtgcag
gaaaaatcggcgcatgaagaatcagtgaacccgatttattatcgtcctgttgatgatctt
gaactgacagtccgatctgcaaattgcctgaaggctgaaaatattttctatattggtgat
ctcgtgcagcgtgctgaagcagacctgctgaaaacacccaacctgggcaagaaatcatta
actgaaattaaaaatgtgctagcagcgcatggccttagccttggtaccaaaattgaaggc
tggcgtacgcctaccgcgcaagacaatgagggtaagaagtaa
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