Algoriphagus sp. NBT04N3: GYM62_11980
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Entry
GYM62_11980 CDS
T09623
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
algo
Algoriphagus sp. NBT04N3
Pathway
algo01501
beta-Lactam resistance
algo01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
algo00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GYM62_11980
01503 Cationic antimicrobial peptide (CAMP) resistance
GYM62_11980
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
algo02000
]
GYM62_11980
01504 Antimicrobial resistance genes [BR:
algo01504
]
GYM62_11980
Transporters [BR:
algo02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
GYM62_11980
Antimicrobial resistance genes [BR:
algo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GYM62_11980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QYH39466
LinkDB
All DBs
Position
complement(2778012..2781242)
Genome browser
AA seq
1076 aa
AA seq
DB search
MFSKFIQRPVLAIAISLAIVFLGILAIATRPISQFPEIAPPRVNIFIAYPGSSADVLVQS
TLIPLERAINGVQGMQYLISDATSAGEATIQIVFEPGTDPNAAVVNVKTRVDQVMNNLPP
LVQREGVIITPIQPSMLMYVNLFSTDKNADEKFLYNYANVHILPELQRISGMGRAQILGS
RQYAMRVWLKPDRMRAYNISTEEVLASIDEQSVIGRPGRLGQASGKTAQSLEYVLTYKGR
FNKPEEYEEIIVKANPEGEIIKLKDIAEVELGSEFFDIYSNKDGYPAASIVLKQNIGSNA
SKVIEQVKSKLEEMESDFPPGMSYEINYDVSKFVNASIDKVMHTLVEAFILVALVVFLFL
GDWRSTLIPAIAVPVSLIGAFVFMQLFGLTINLITLFALVLAIGIVVDDAIVVVEAVHAK
MEEEHLSPYKAVKKVLGEISGAIIAITLIMTAVFVPVAFMTGPVGVFYRQFSITMASSIV
LSGVVALTLTPVLCAMILKNNHGKARRKSPVDRFLDWFNRKFEKLTGRYVSLLRLIVNRR
VVTWGILIAFGLGIFAVNEKLPSGFIPNEDQGMIYAIIQTPPGSTLERTNEVSRKLQEIA
EEVDGIQSVSSLAGYEILTEGRGSNAGTCLINLKDWSQRHHSVRKIIHELEEKTKDLGAV
IEYFEPPAVPGYGSSDGFSLRMLDKNSTVDYQEFDQVNSEFMTELKKRPELSGLFTFFAA
NYPQYELIIDNELAMQKGVSIGKAMENLDVLIGSTYEQGFIRFGNFFKVYTQSAPEYRKL
PSDILNLFIKSEHGEMVPYSAFMKMEKKQGPNEITRFNLYTSSSIKGVPAPGYTSGDAIQ
AIQEVAEKTLPNGYDIAWEGLSYDEARRGNEALYIFIVVLIFVYLVLAAQYESFIIPLAV
IFSLPVGVFGSFLLLKMMGLANDIYAQIGLIMLVGLLGKNAVLIVEFAVQKHQQGSSVLE
AAIEGAKVRFRPILMTSFAFIAGLIPLVIATGPGAIGNRTIGSSAMGGMLFGTIFGVLIV
PGLYFLFGSLAEGRKLIRDEDENPLSEDFVGSGTRNSLLKKIKKLLSKNNINHEEV
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgtttagcaaatttatacagagaccggtattggcgatagccatatcgctcgccatcgta
tttctgggtattctagccatagctaccagacccatctcccagtttcctgaaattgcacct
ccacgggtaaatatttttatcgcttatccgggatcgagtgctgatgttttggttcagtct
accctcattcctttagaaagggcaatcaatggagttcagggtatgcaatacttaatttcg
gatgctaccagtgccggagaggcgactattcagattgtttttgaacccggaactgatccc
aatgcggctgtagtcaatgtcaaaacgagggtggaccaagtaatgaataatctcccgcct
ttagtgcagcgggaaggagtaattattacccctattcagccaagtatgctgatgtatgta
aaccttttcagtacagataaaaatgctgatgagaagtttttgtacaactatgccaatgtg
cacatactaccagaactgcaaagaatcagcggcatgggtagggctcaaatcctaggaagt
agacaatatgcaatgagggtttggcttaagcctgaccgaatgagagcttacaatatttct
accgaagaggtattggcctccatagatgagcaaagtgtgatcggtagaccgggccgcttg
ggtcaagcatccggaaaaacggctcaatctctggaatatgttctaacctataaaggcaga
ttcaataaacctgaggaatacgaagagattattgtaaaagcgaatcctgaaggcgaaatc
atcaaactgaaggatatagccgaagtggagcttggcagtgagtttttcgatatctattcc
aataaggatggttacccagctgcctccatcgtattaaagcaaaatatcggaagtaatgcc
agcaaagttattgagcaagtgaaaagcaaactggaggaaatggaatctgactttcctccg
gggatgagctatgagattaattatgatgtgtccaagtttgttaatgcatccattgataaa
gtgatgcataccttggtggaggccttcatattggttgccttggtagtctttttattcttg
ggggactggaggtccaccttgattccagcaattgcagttcccgtttccttgatcggagcc
tttgtgtttatgcagctttttggtttgacgatcaatttgatcaccctgtttgcattggta
ttggctatcggaattgtggttgatgatgccatcgttgtagtggaggcggtacatgcaaaa
atggaagaagaacacctatctccctacaaggctgtgaaaaaagtgttgggagaaatcagc
ggtgcaatcattgccatcaccctcatcatgactgctgtattcgtgccagtggcctttatg
actggacctgtgggcgtcttttacaggcagttttccattaccatggccagctccattgtg
ctatcaggtgtggttgcattgaccctaactccggttttatgcgcgatgatcttaaaaaac
aatcatggcaaagcaagaagaaaatctcctgttgatcgcttcttggattggttcaataga
aaatttgaaaaacttaccggaagatacgtttcattacttcgcctgattgtgaataggaga
gtggtgacttggggaattctaatagcatttggattgggaatttttgcagtcaatgaaaaa
cttccttctgggttcatccctaatgaggatcaggggatgatttatgccattattcaaact
cctccgggatctaccttggagagaaccaatgaggtttccagaaagcttcaggaaattgca
gaagaggtggatggaattcaatctgtttcctcattggcaggatatgaaatcttaaccgag
ggaagaggctccaatgcaggtacttgtttgatcaacttgaaagattggtctcagagacat
cattctgttaggaaaattattcatgaactggaagagaaaaccaaagatttgggagctgta
atcgaatatttcgaaccgcctgctgttcccggatacggttcatctgatggtttttctctg
agaatgctagacaaaaacagcacggtggattatcaagagtttgatcaggttaattcggag
tttatgacagaattgaaaaaaaggcctgagctctcagggctcttcactttttttgctgcc
aattatcctcagtatgagctgattattgataatgaattagccatgcaaaagggagtgtca
ataggtaaggccatggaaaaccttgatgttttgattggtagtacctatgaacagggattt
atccgttttggaaatttcttcaaggtatatacccaatcagctcctgagtacagaaaactt
cccagtgatattctgaatcttttcatcaagagcgagcatggagaaatggtgccttactca
gcctttatgaaaatggagaaaaagcaagggcctaatgagatcactcgattcaacctctat
acttcttcctctatcaaaggagttcctgctccaggatacaccagtggggatgcgatacag
gccattcaggaagtggcggaaaaaactctgccaaatgggtatgatatagcatgggaagga
ctttcctacgatgaggctagaagaggaaatgaagcactctatatttttattgtagtactg
attttcgtgtacttggtcttagcagcgcagtacgaaagcttcataattcctttggctgta
atattctcccttcctgtgggggtatttggatctttcttacttctaaaaatgatgggtttg
gcgaatgatatctatgcacagataggccttatcatgctagtgggcttgctaggtaaaaat
gccgtcttgatagtggagtttgcggtgcagaagcatcaacagggatcatcggttttagaa
gcagcgatagaaggagctaaagtcaggtttagacctattttgatgacttcctttgccttt
atagcaggtctgattcctttggtgatagctaccggccctggagctatcggaaataggaca
atcggctcctccgccatgggagggatgttgtttgggacaattttcggggtactcattgta
cccgggctctacttcttatttggcagcttggccgaaggtagaaagctaatccgggatgag
gatgaaaacccattgagcgaggattttgtgggctctggaacccgaaattctttattgaag
aaaatcaaaaaattactgtctaaaaacaatatcaatcatgaagaagtctaa
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