Algoriphagus sp. NBT04N3: GYM62_15110
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Entry
GYM62_15110 CDS
T09623
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
algo
Algoriphagus sp. NBT04N3
Pathway
algo01501
beta-Lactam resistance
algo01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
algo00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GYM62_15110
01503 Cationic antimicrobial peptide (CAMP) resistance
GYM62_15110
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
algo02000
]
GYM62_15110
01504 Antimicrobial resistance genes [BR:
algo01504
]
GYM62_15110
Transporters [BR:
algo02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
GYM62_15110
Antimicrobial resistance genes [BR:
algo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GYM62_15110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
MMPL
Mu_Gam-Sipho_Gp157-TOTE
Motif
Other DBs
NCBI-ProteinID:
QYH40052
LinkDB
All DBs
Position
complement(3477003..3480077)
Genome browser
AA seq
1024 aa
AA seq
DB search
MTTHKFNVIELAMRYKQIAITITSLLVLFGIFSLWVMPRNEFPEFIIRQGLIIGVFPGAT
SEQVEDQLATKVESFLYGFKEVNREKTYSISREGMLVVFVEVNNNVKDPDGFWDKIKFGL
SELKLQLPPQVLALIANNDFGDTAALLLTIQSESKTYKELEKELKIIETELRKIKAVSKV
KHYGIQQEQIAIYLDNAKLAYYGVRPITVLAAMQLEGAVYYGGELNNSELITPIHIPANF
KSEEDIKNQIVYADPAGNIIRMKDIATVVRKYKEPDSFIKNNGAKSLLVSLEMQPGNNIV
DFGKQVDQSLASIRTKISSDVNLDKIADMPTAVDRSIIHFLKEFFIAIIAVIIVTMLLLP
LRVAAVAGVTIPITIFITVGILYLLGVELHTVSLAGLIVVLGMVVDNAIVVIDSHVEKLD
HGETPWDAAWKSATELFVPVFSATLAIIATYVPLVFFLSGMTGDFVGSLPVTIGVALFTS
MLVAYFLVPYMSYVFIKKGVRKGEAEEAKADKKSLLDWVQQFYNSTLESAFRGPKLTMLV
GLLSILLGGAIMALLPRQLFPKVERNQFAVEIYLPEGYTLAQTVAVADSMEVLLMSDSRV
VNVASFMGTSSPRFHTTYAPNFPSKNYAQLVVNTITADDAVAILDEYEAKRNIFPNAYVR
MKQLDMLSTTAPIEVRISGNNIDSIKAIAENVKSIMQQNDAVIWARTDYLNKRQGVRVDV
NDELANRLGLTRGLIASSIASGFSGIPIGTVWEGDYPVDVKVINPIDKRDGFDDIENQNV
TSLFLSATVPVRQVTTITTDWSEGQIIRRNGVRTITVRADVKRGVLPYKILAELKPELKK
IKTGSDVQLTYGGEEESELENYTPLSKAMLAGVMLIYFILLFQFKRSRLVFLVMLTMPLS
FLGAAMGLVLTGYPFGLTSFLGIMSLMGIVVRNGIILIDYAEELRNKNGMLLAEAAVAAG
KRRMRPIFLTSFAAAVGVVPMIVSGSSLWGPLGAVVCFGLLISMILTLYVLPVMYHQSLK
KSIA
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgacgacacataagtttaatgtcatagaattggctatgaggtataagcaaatagccatt
accataacaagtctgttggtgttgtttggtatattttctctttgggtaatgccccgaaat
gaatttcctgagttcatcattcgacagggattgatcatcggtgtatttccgggggctact
tccgaacaggtggaagaccaattagccaccaaagtggaaagttttctttacggttttaaa
gaagtaaaccgggagaaaacgtattccatatccagagaaggaatgttggttgtgtttgtg
gaagtaaacaacaacgtaaaagaccctgatggcttttgggataaaataaaattcggcctc
agcgaattaaaattacagttgccaccgcaggtacttgcgctgattgccaacaatgatttt
ggcgatacagccgctttgctacttaccatacaatcagaaagcaaaacctataaagagctg
gagaaagaattgaaaattatcgaaacggaattgcgaaaaataaaggccgtttctaaagta
aaacactacggaattcaacaggaacagatagccatttatctggataatgctaaactggct
tattacggtgtgcgtcctattacggtgcttgccgccatgcaattggagggtgctgtgtat
tacggtggcgaactcaataattcagaattgattacaccgatacatattccagcaaatttc
aaatcggaagaagacattaaaaaccaaatcgtgtatgccgatcctgctggtaacatcatc
cggatgaaagatattgctactgtagttagaaaatataaggaacctgactctttcataaaa
aacaatggggcaaaaagcttgctggtgtcattggaaatgcaacctggcaacaacattgtt
gattttgggaaacaggtggatcaatccctcgcttccatccggactaaaatttcttctgat
gtaaatctggataagattgctgatatgccaacagccgtagatcgttccattattcatttc
ctgaaagaatttttcattgctattatcgctgtgatcatcgttacgatgttgttattgcct
ttacgggtagctgcggttgccggcgtaacgatccccattaccatttttataaccgtaggc
attttatatttattaggtgttgaactacacaccgtttcgcttgcaggattaatcgttgta
ttaggcatggtggtggataatgccattgttgttattgatagtcatgtagaaaaattagat
catggcgaaacgccctgggatgctgcctggaaaagtgcgacagaactttttgttccggta
ttttctgctacccttgccattatcgctacctatgttcctttggtatttttcttatctgga
atgaccggtgattttgttggttctctgcctgttaccattggtgtggccttgtttacgtct
atgctggtggcctactttctggttccttacatgagctatgtatttatcaaaaaaggagtc
aggaaaggagaagcggaagaagcaaaagccgataagaagtcactactcgattgggtgcaa
cagttttataatagcacactcgaaagtgccttcagaggaccaaagctgaccatgctggta
ggcttactctccattttattaggcggagcaatcatggcactgttgccacgacagttattt
ccaaaagtggagaggaatcagtttgccgtagaaatttatctaccggaaggatacacactt
gcccaaacagttgctgttgccgatagtatggaggtattgctcatgagtgatagtcgggtg
gttaatgtagcctccttcatgggtaccagctcaccacgtttccacactacctacgcacct
aatttcccatcaaaaaattatgcgcagttggtagtcaataccataacagccgacgatgcc
gtggcaatattggatgaatatgaagcaaaacgcaatatttttccaaatgcctatgtgcgc
atgaaacaattggatatgctgagcacaaccgctccgattgaagtacggatttccggtaac
aacattgattccataaaagccatcgctgaaaatgtaaaaagtataatgcaacaaaacgat
gctgttatatgggcgcgtacggattatcttaataaaaggcagggtgtgcgtgtagatgtg
aatgatgaactcgccaaccggttagggttgacccgaggactaatcgcctcttcaatagca
tctggtttctctgggatacctataggtacagtttgggaaggagattatccggtagatgtg
aaggtcattaatccaatcgataaaagagatggttttgatgatatcgaaaatcaaaatgta
acatccctgtttttgagtgccacagttcctgtgcgacaggtaactaccataaccaccgac
tggagcgaagggcaaattatccgcaggaacggtgtacgaactattacggtgcgagcggat
gtaaaaagaggggtgctaccttataaaatattagctgaactaaagccggaactcaaaaaa
ataaaaacaggttccgatgttcaactcacgtatggcggtgaggaggaaagtgaattggaa
aattatacaccgctgagcaaagccatgctggcaggcgtaatgttgatttattttattttg
cttttccagtttaagcgatcgagattagtctttttagtgatgctgaccatgcctttaagt
tttctgggtgcggctatgggtttagtacttaccggttatccttttgggcttacctccttc
ctcggaataatgagccttatgggtatcgtcgtgcgcaatggcattatcctgattgattat
gctgaagagctccgcaacaagaacggaatgttattggcggaagcagcggtggctgccggt
aagcgtagaatgcgccccatatttctcacttcttttgcggctgccgttggcgtggtgccg
atgattgtaagtggctcatctctttgggggcctttaggtgctgtagtttgctttggactg
ctgatatccatgatacttaccttgtatgtgctgcctgtgatgtatcatcaatcacttaag
aaatcaattgcttaa
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