KEGG   Austrofundulus limnaeus (annual killifish): 106513932
Entry
106513932         CDS       T06063                                 
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
  KO
K12823  ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13]
Organism
alim  Austrofundulus limnaeus (annual killifish)
Pathway
alim03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:alim00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106513932
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:alim03041]
    106513932
   03009 Ribosome biogenesis [BR:alim03009]
    106513932
Enzymes [BR:alim01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     106513932
Spliceosome [BR:alim03041]
 Complex A
  U1 snRNP components
   U1 related factors
    106513932
 Complex B
    106513932
Ribosome biogenesis [BR:alim03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    106513932
SSDB
Motif
Pfam: DEAD Helicase_C ResIII ERCC3_RAD25_C UTP25 CMS1
Other DBs
NCBI-GeneID: 106513932
NCBI-ProteinID: XP_013858448
UniProt: A0A2I4ASI6
LinkDB
Position
Unknown
AA seq 527 aa
MLASRFRLQCLRLLHSSHGGRPPWFGGSQSGARGGRKNFSFPGERLVKKHWNLNELPKFE
KNFYQQHANVACMSPEEVEEYRTTRAITVTGDCPNPVTKFHEVNFPSCVMEVINKQNWTE
PTPIQAQXWPVALGGKDMVSIAQTGSGKTLAYLLPAIVNISHQPPLKNGDGPICLVLAPT
RELARQVQQVAAXYTRAANLKSTSVYGGAPKYPQLRDLESGVEICIATPGRLIDFLEEGQ
TDLSRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEIRQLANDFLKD
YVQINVGALQLCANHNIRQIVDVCRNEDKEKKLVHLLQDIMSEEENKTIIFVATKMQCDY
LTRRIKKEGWIALGLHGDKRQNERDRVLNKFKTGEAPILIATDVASRGLDVEDVKFVINF
DYPNTSEDYXHRIGRTGRCQKTGTAHTFFTPDNMRQARDLISVLQEANQDINPELTMLAE
AGGRPGVGRNIYRSNYRSNNRSNYRSNYRSNYRDDGLNRQQLFGRGQ
NT seq 1584 nt   +upstreamnt  +downstreamnt
atgcttgcctcccggttcagactgcagtgtttgcggctgctacactccagccatggcggt
cgacctccatggttcggtggcagtcaaagtggagccagaggtggtagaaaaaattttagt
tttcccggtgaacgactggtgaaaaaacactggaacctgaacgagctcccaaagtttgag
aaaaacttctaccagcagcatgccaacgtcgcctgcatgtcaccggaagaggttgaagaa
tacaggacgaccagagcaattacagtgacaggagattgtccgaaccccgttacaaagttt
catgaagtcaacttcccctcttgtgtaatggaagtaatcaacaaacagaactggaccgaa
ccaacacccatccaggcacagrgttggccggtggctcttggaggcaaggacatggtcagc
attgctcagactggctctggcaagactcttgcttatctcctgcctgcaattgtcaacatc
agccaccagcctcccttgaaaaatggagatggtcccatttgtttagtgctggccccaact
cgtgagctggcccggcaggtgcagcaggtggccgcagaktataccagagctgctaacctg
aaatcaacctctgtctatggaggagcaccaaagtaccctcagcttcgtgacctggaaagc
ggtgtggagatctgcattgccactccaggcaggcttatcgacttcctcgaggaaggacaa
acggacctcagcaggtgtacctacctggtgctggatgaggctgacagaatgttggacatg
ggctttgagccacagattaggaaaattgttgaccaaatcaggcctgacagacagactctg
atgtggagtgccacgtggcctaaagagattcgccagctggcaaacgacttcctgaaggac
tatgtgcagattaacgttggtgcccttcagctctgtgccaaccataacatccgccagatt
gtggatgtttgccgtaacgaagataaggagaagaagctcgtccatctgctacaagacatc
atgagtgaggaggaaaacaagaccatcatctttgtcgcgacaaagatgcaatgtgattat
cttacccgtagaattaagaaagaagggtggattgctctgggactccacggtgataaaaga
caaaacgaacgagaccgcgttcttaataagttcaaaactggcgaggccccaattctgatt
gctacagatgttgcatccagaggtttagatgtggaggatgtgaaatttgtcatcaacttt
gactaccccaacacctccgaggactatrtccaccgcattggcagaacgggtcggtgccag
aagacgggcacggcccacaccttcttcacaccagacaacatgaggcaggccagggacctg
atctctgttctgcaggaggccaaccaggacatcaatcctgagctcaccatgctggcagag
gcaggaggtcgtcctggagtcggcagaaacatctacagaagtaactacagaagtaacaac
agaagcaactacagaagcaactacagaagcaactacagagatgatggtttgaatcggcag
cagctgtttggtagggggcaatag

DBGET integrated database retrieval system