Austrofundulus limnaeus (annual killifish): 106517918
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Entry
106517918 CDS
T06063
Name
(RefSeq) LOW QUALITY PROTEIN: sodium channel protein type 4 subunit alpha-like
KO
K04838
voltage-gated sodium channel type V alpha
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
106517918
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
alim04040
]
106517918
Ion channels [BR:
alim04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
106517918
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
GPHH
FixH
Motif
Other DBs
NCBI-GeneID:
106517918
NCBI-ProteinID:
XP_013864425
UniProt:
A0A2I4B9L8
LinkDB
All DBs
Position
Unknown
AA seq
1803 aa
AA seq
DB search
MAMSDPPTWTKYLEYTFTGIYTFESAIKILARGFCLVPFTFLRDPWNWLDFTVIVMAYVT
EFIDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMILTVFCLSVFALI
GLQLFMGLLRQKCIRSLEHCINSSYSPNTTFICNNRTWSSPEDFLSNEDNFYKVEGQKDA
LICGYGSDAGKCPDGFDCLKLGRNPNYDYTSFDTFGWAFLALFRLMTQDYWEELFHQTLR
SAGKTYMVFFVLVIFLGSFYLVNLILAVVAMAYEEQNQATIAEAWQKEREFQLAMEHLRR
EQRLAAKRQAQETELSPELSPFIVKRGSIRRNSSTRRRKSHQALSEETAGEAAEEKLDPV
DEIVPPLSPLPVHPLLATLSSHPLSTRRGSQNSIFSTFRTRNNSEADFGDDEYSVHGDVF
RSRASSTVTPWKKRTGSVRSHCSQVLTPSFNVNGRLNISLDQNGVTCMGLLTPTSLPAHS
MERVREEVKPSCAGDTTPRLLQPSPVITEPTSVRRKRVRSSVSFLSDAMEELEESRQKCH
PCWYTFAKKYLIWDCCPWWLKLKEWVKFMVMDPFLDLGITICIVLNTLFMALEHYPMTDE
FNTMLSVGNLVFTGIFTAEMVLKLIALDPYYYFQQGWNIFDGIIVCLSLMELGLSNVEGL
SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKN
YQDCVCKIAFDCQLPRWHMKDFFHSFLIVFRVLCGEWIETMWDCMEVAGQPLCILVFMLV
MVIGNLVVLNLFLALLLSSFSSDNLSAPDEDGDLNNIQVAIARIHGGVSWLGRSTINLFQ
HSLRSQKAKEAGQAIXLAGNHIESNGGVFSKXGEKYFISEEDSYMTNPNLTVIVPIAPGE
SDVEFLEEEENSESSDDEDNKPEKISLSEGSTVDLRKPGEVEDDLSELAEDGMEPEDCFP
KLCLRHCECCSIDTSQGLGQAWWRLRKTCYQIVEHSWFETFIIFMILLSSGALAFEDIYI
ERRKVIKVVLEYADKVFSYIFVLEMFLKWIAYGFKKYFTNYWCWLDFLIVDVSLISLVAS
SLGYSEFSAIKSLRTLRALRPLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFS
IMGVNLFAGKFGKCVNKTGFIHSISVVNNKSDCLAMNDTQFFWTKVKVNFDNVGLGYLSL
LQVATFKGWMEIMNAAVDSRGVEEQPSREINLYMYLYFVVFIIFGSFFTLNLFIGVIIDN
FNQQKRKLGGQDIFMTEEQKKYYNAMKKLGTKKPQKPIPRPANILQAFFFDLVSKQAFDI
MIMMLIIVNMVTMMMETDEQSERMESILNMINLVFIVIFTTECLIKIFALRCYFFTIAWN
IFDFVVIILSIVGIVLADIIEKYFVSPTLFRVIRLARIGRVLRLIRAAKGIRTLLFALMM
SMPALFNIGLLLFLVMFIYAIFGMANFAYVKKQDGIDDMFNFETFGNSIICLFQISTSAG
WDNLLSPIMSNSPEECDVNFINTGTNTRGNCGNPSVGIAFFVSYIIISFLIVVNMYIAII
LENFSVATEESTEPLSEDDFEMFYEVWEKFDSEATQFIEFSKLERFANALSEPLRIAKPN
KIQLISMDLPMVSGDRIHCLDILFAFTKRVLGESGDMDTLKQQMEEKFMTTNPSKISHEP
ITSTLRRKMEEVAAIIIQRCYRRHLVCRQMKQASYLYRQINYEVVVDVENAPETEGLIAS
MIQHYGPVLVESDQTTEDTLLSSSPFYHTPTWATSLSPPDPSRTTSRGSEPQESSENYEE
TFL
NT seq
5412 nt
NT seq
+upstream
nt +downstream
nt
atggccatgtctgatccgccaacgtggaccaaatacctggagtacaccttcactggcatt
tacacttttgagtcagcaataaagatcttagccagaggattttgtttagtgcccttcacc
ttcctcagagatccgtggaactggcttgacttcaccgtcatcgtcatggcatatgtcaca
gaattcattgatctgggaaacgtctctgcactgagaaccttccgagtccttcgagcgctg
aaaaccatctctgttattccaggtctgaagaccatcgtgggtgctctgatccagtctgta
aagaagctggcggacgtgatgatcctgaccgtcttttgtctgagtgtgtttgctctgatt
ggcctgcagcttttcatggggctgctgcgacaaaagtgcatccgcagcctcgagcactgc
atcaactcttcgtacagccccaacacaacgttcatctgcaacaaccgaacctggagctca
cctgaggacttcctaagcaatgaagataatttttacaaagttgaaggacaaaaagatgca
ttgatatgcggatatggaagtgatgcaggaaaatgcccagatggatttgactgcctaaaa
cttggaagaaatccaaactatgactacaccagttttgatacctttggctgggcttttctg
gcacttttcagacttatgacccaagactactgggaagagctgtttcaccagactctgcgt
tctgctgggaagacctacatggttttctttgtgctcgtaatctttcttggctccttctac
ctggtcaacctgatcctggctgtggtggccatggcctatgaggagcagaaccaagcgacc
atcgccgaggcctggcagaaggagagggagtttcagctggccatggagcacctcagacgg
gagcaaagactggcagccaaaagacaagcacaggagacagagctgtccccagaactgtcc
ccattcattgtgaagagaggaagtatacggcgcaacagcagcactagaaggagaaagtcc
caccaggctctttcagaggaaacagcaggagaagctgctgaggagaagctggatcctgtg
gatgaaatcgtgcctcctctgtccccactgcctgtccaccctctgttggccacgctgtcc
tctcaccccctcagcaccaggagaggaagccagaacagcatctttagcactttccgaact
cgtaacaactcagaggctgacttcggggacgatgagtacagcgtgcatggagacgtcttc
aggagtcgcgccagttctactgtaacaccctggaagaagaggacgggcagtgtgaggagc
cactgctcccaagtcctaaccccctcttttaatgtcaacggccgactgaacatctccttg
gaccagaacggcgtcacctgtatgggacttctcacccccacgtccctgccagctcacagc
atggaaagggtcagggaggaggtgaagcccagttgtgcaggagacacaactcccagactc
ctacagccctcccccgtaataacagagcccacttcagtgcgcaggaagagagtccggagc
tctgtcagcttcctcagtgatgccatggaggaactggaagaatccaggcagaagtgccat
ccctgctggtacacgtttgccaagaagtatttgatctgggactgctgcccctggtggctg
aagctgaaggagtgggtgaagttcatggtgatggatcctttcctggatctgggtatcacc
atctgtatagtcctgaacaccctcttcatggccctggaacattaccccatgactgatgag
ttcaacaccatgctgtctgtgggcaatctggtgttcacagggatctttacagctgagatg
gttttgaagctgattgccttggatccatattactacttccaacaaggctggaacatcttt
gacggcatcattgtctgcctcagcctgatggaactgggtctgtctaacgtggagggactg
tctgtgctgcgatcgttcagactgttgcgagttttcaagttggcaaagtcctggccaact
ctcaacactctaatcaagattattgggaactctgtgggagccctggggaacctgacgctg
gtgttggccatcattgtcttcatctttgccgtggtggggatgcagctgtttgggaagaac
taccaagactgtgtgtgtaagatcgcctttgactgccagctgcctcgctggcacatgaag
gacttcttccactccttcctgattgtgttcagggtgttgtgcggcgagtggattgagacc
atgtgggactgtatggaagtggccgggcagcctctttgcatcctggtcttcatgctggtc
atggtcataggtaacctggtggttctgaatctttttctcgccctgctgctcagctccttc
agctctgacaacctctctgctccggatgaagacggtgatttaaacaacattcaggtcgcc
atcgcccgcatccacggcggcgtgtcctggctcgggaggagcaccattaacctcttccaa
cacagcctgaggagtcagaaagccaaagaagctggtcaagccattagkttggctggaaat
cacatagaaagtaacgggggagttttttcaaagtarggagagaagtacttcatatcagaa
gaggatagctacatgacaaacccaaaccttacagtcattgttcccatcgcacctggagag
tcagatgtggagtttctggaggaagaggagaattcagagtcatctgatgatgaagataac
aaaccagagaaaattagtctctcagagggcagcacggtggatctgagaaaacctggagaa
gtagaggatgatttatctgagctagctgaagatggtatggagccagaggattgctttcct
aaactgtgcctgagacactgtgagtgctgcagcatcgacaccagccagggtctgggtcag
gcctggtggaggctgaggaagacctgctaccagatcgtggagcacagctggtttgagaca
tttatcatcttcatgatcctgctcagcagtggagctctggcatttgaagatatttatata
gagaggagaaaagtcataaaggtggttttggaatatgctgacaaagtcttctcctacatc
tttgtcctggagatgtttctgaagtggattgcytacggcttcaagaaatatttcaccaac
tactggtgctggctcgactttttgattgtagatgtstccctgataagtctggtagcaagt
tcactgggatattcagaattctcagccatcaagtccctgaggaccctccgggctttgaga
ccgctcagagctctgtccagatttgagggcatgagggtggttgtgaatgctcttatagga
gccatcccctccatcatgaacgtgttgctcgtgtgtctcatcttctggctaatcttcagc
atcatgggagtcaacctgtttgctggcaagtttgggaagtgcgtgaacaaaacgggcttc
atccacagcatctctgtggtcaacaacaagtctgactgtctggccatgaatgacactcag
ttcttctggacaaaagtcaaggttaactttgacaacgttggacttggttacctttccctc
ctgcaggtggcaacatttaaaggatggatggaaataatgaatgcagctgttgattcaaga
ggagtggaggaacaacccagcagagaaattaacctctacatgtacctctactttgttgtc
ttcatcatattcggctccttctttaccctcaaccttttcatcggtgtgatcattgacaat
tttaaccaacagaaaagaaagttaggtggacaggatatcttcatgactgaagaacagaaa
aagtattataatgccatgaaaaagctgggaactaagaaacctcaaaaacccataccaagg
cctgcgaatattctccaagccttcttctttgatctggtgtccaagcaagccttcgacatc
atgatcatgatgctcatcatcgtcaacatggtgaccatgatgatggaaaccgatgagcag
tcggagcgcatggagtccattctcaacatgatcaacctggtcttcattgtgatcttcacc
accgaatgcctgatcaagatctttgccctccgatgttattttttcaccatcgcttggaac
atttttgactttgtggtgatcattctttctatagtggggattgttcttgctgacataatt
gagaagtactttgtatctccaaccctgtttcgagtcatcagactggcaaggataggacgt
gtgcttcgacttatacgtgcagccaaaggaatacggactttactgtttgccttaatgatg
tccatgccagcactgttcaacattggcctcctgctttttcttgtcatgtttatctacgct
atcttcggtatggcgaactttgcctacgtgaaaaagcaagatgggatcgatgacatgttt
aacttcgagacctttgggaacagtataatctgcctttttcagatcagcacctcagcaggc
tgggacaacctcctgagccccataatgtccaactctccagaggaatgtgacgttaacttt
atcaatactggcaccaatactcgaggaaactgcgggaacccgtcggtgggcatagctttt
tttgtcagctacattatcatctccttcctcattgtggtaaacatgtacatagcaatcatt
ctggaaaacttcagcgttgctacagaagagagcacagaaccactgagcgaggatgacttt
gaaatgttttatgaggtttgggagaagtttgactccgaggccacgcagtttatagagttt
tcaaagttggaaagatttgcaaacgctctgtctgagccactgcggatcgcaaaacccaac
aagatccagctgatttctatggaccttcctatggtcagtggggacaggatccactgccta
gacattttgtttgccttcacaaagcgtgtgctaggagagtcgggtgatatggacaccctc
aaacagcaaatggaggagaagtttatgacgactaacccctccaaaatttcccacgagccc
atcacatccaccctgcgccgcaaaatggaggaggtagctgcgatcatcatccagagatgt
tacaggaggcatctggtgtgccggcaaatgaagcaggcatcatacctttacagacaaatc
aactatgaagttgtggtagatgtcgagaatgctccggagacagaggggctgatagcctcc
atgatacagcactacggacctgtgcttgtcgagagtgaccagacaacagaagacacatta
ttgtcctcatcaccattttatcatactccaacctgggcaacctctctgagtccccctgat
cccagcagaacaacatctagaggrtctgaaccgcaggagtcgagtgaaaattatgaggaa
actttcctttga
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integrated database retrieval system
