Austrofundulus limnaeus (annual killifish): 106520430
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Entry
106520430 CDS
T06063
Symbol
ttc37
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106520430 (ttc37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alim03019
]
106520430 (ttc37)
Messenger RNA biogenesis [BR:
alim03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
106520430 (ttc37)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_16
TPR_14
TPR_19
TPR_17
TPR_11
TPR_8
TPR_12
TPR_CcmH_CycH
TPR_9
TPR_7
ANAPC3
ARM_TT21_N
TPR_15
ARM_TT21_C
PknG_TPR
COG4_N
Motif
Other DBs
NCBI-GeneID:
106520430
NCBI-ProteinID:
XP_013867980
UniProt:
A0A2I4BJQ3
LinkDB
All DBs
Position
Unknown
AA seq
1571 aa
AA seq
DB search
MSNKEVKAALKSAKEAIKNKEFKEALKHCKTVLKLEKNNYNAWVFIGLAASELEQPDQSQ
AAYKKAVELEPEQLLAWQGLANLYEKTDQWDFKDELPNTYQKLVELYARSDKNKCYEVMK
KLSDIYQSDREYLKLAKVWLQLVQLKEDEGVDRKELVQLLQKMMELLSEFINGEEQDNET
QQHLITAFEKALTLTDPIPGEEHKKLSTDYVKYLSKLPHEEAKMKEACQSMLTLYPNQTY
PLEVLCHHYLKTNNMDEDAVSSFSRLLELAPNSGLGRLGLGTKALLEGRYKEAIADLEQG
LKKRSTSTGWYNLAEAQIKIHKYSDSAASCSQGLDVCTSEDIKLKDKLLRLKMEALVKSG
GEKAADEAMKTFSQIPEAEKDPLLLVYKGYSFLNKGQTDQTLKLLSELEALNSNLAQMSA
LRGRVHSAEGQLQLAEQSFLKAAGQSPDSGEYYFLLGKLYWDMGAETRKDRSKAHTHLLK
AAKLDPNLGCAFRYLGHYYREVANDNGRAQGCYKKAFQLNSDDVECGAAAVDLSMGQGDM
DNALAMLQSVIEKATPGSAKWAWMRRGLYYLKVGEHQKAINDLQAALRADPEDWVCWECL
GEAYLNRRSFTAALKAFGKAHQLQPSSIYSVYQAAAIKQTLGKFKEAVAEYLQITTKQDY
VPALKGLGECQLSLAKSLMEDCRDGGAIDLIQQALQNLFRAVKLRPDLSCLWKLLGDACT
AAVTVSPNRAEVLVPALLAGLDPNAPDPILNQADMLKVGERCYAHALKLMPEAASLWHDL
GLNYYHQATSLPSLTEKDQDSQPLNLNKAQECLRKAIKMDSENHSYWNALGVISMNKGLE
NFALAQHCFIKSIQVEPNNVVAWTNLGSLYLKKDSVELAHEAFKIAQSLEPLYVNCWIGQ
ALIAERVGSYDTMDLFRHTTELSTHMEGVKGYAYWVCSTLLDKNNRDTELYRYNIVQMNA
ISAAQVALSKYTERIQSDPDAFIMLGYLNEHLQLKRQALQAYQRAVELLQSVSSSEELAF
TLGSYARALCTSGQWEEAIQVYNSTPLQDLSDLVGLALTYCRAGLFPESISTYERALAVA
SSEKDKAYILTALAMLQHRQGNLDLAKTLLFKCSVLKEPISESLLCLCALGLVRRDATLA
AAALTELLKQGSASAGVEEQQCLLTCSLLALQGNYSAVQREASRAVHRNPGNPSLWALLS
RVIPQYYPKKANGGAVAGHVACLASMTQGKRALLYSGVNQLASGRHSGEDAQSNALKMMQ
RAVLLCPDDPATWAGLMAACHTENTCCYLSGSAPRRRSLEHTLMSVVSEKVRSVEEIERP
LAQSLEGWVLQQAVTGLMLEGQLDQAETLCMQVLNVSPEHPAVMLLLRQVQCQRLLMADG
GTVLPDSVLEQLNKAVAMNPANLGAWHWLAEVYRSQGLLVQAVLAYRQSLQLALQLGVHS
YQVSSLLRLALLALGPCMAGVPGNEWKDLVTEATTEVLKLGSSRMALLFQALLQFVTKMG
ARETRRLLEKQVYASSEDVPETVVQVASWYLLRHLHAKNDQELINVLLQHAKMNGNQRLL
ELHSLLNSSSI
NT seq
4716 nt
NT seq
+upstream
nt +downstream
nt
atgtctaataaagaagtgaaagccgcactgaaaagtgccaaggaggccatcaaaaacaag
gaattcaaggaggctttgaagcactgcaagactgttttgaaacttgaaaagaacaattac
aatgcatgggttttcatcggtctggcagccagtgagctggaacaaccagatcagtcccag
gcagcctataaaaaagcagtggagctggagccggagcagctgctggcctggcagggctta
gcaaacctttatgaaaagactgatcagtgggatttcaaagatgagctgcctaacacctat
caaaaacttgttgagctgtatgcaagatctgataaaaacaaatgttatgaagtgatgaaa
aagctgtcagatatttatcagtctgacagggaatatttaaagttagcaaaggtttggctg
cagctcgttcagctgaaggaggacgagggcgtggataggaaagagttggtgcaactgtta
caaaagatgatggagcttctttccgagttcataaatggggaggagcaggacaatgaaact
caacagcatttaatcacagcttttgagaaagccctgactctcaccgaccctatacctgga
gaggagcacaagaagctttcaacggattatgtaaaatatctttctaaacttccacacgaa
gaggccaaaatgaaagaggcatgccagtcaatgctgacactctacccaaaccaaacttat
cctcttgaggttctttgccatcactacctcaaaacaaataatatggatgaagatgcagta
agtagtttttcccgactcttggaactggctcccaacagtggacttggtcgcttgggtttg
ggaaccaaagcccttctggaagggaggtacaaagaagccattgccgacctggagcaagga
ctaaagaaaaggagcacatcaacagggtggtacaatctggccgaggctcagattaaaata
cacaaatactctgacagtgctgcatcctgctcacaaggcttggatgtatgtacgtctgaa
gacataaagctgaaagacaaactgcttcgactgaagatggaggccttggtgaaaagcgga
ggagagaaggcagcggatgaggctatgaagacattttcacagattccagaagctgagaaa
gaccctctgctattagtctataaaggatattcatttcttaacaaaggacagactgatcaa
acactaaagctcttgtcagagctcgaggccttgaattcaaacctggcccagatgtcggct
ctaagaggacgagtacattcagctgaaggtcagctgcagctggcagagcagagtttccta
aaggctgccggtcagagcccagacagtggagaatattatttcttgcttggaaagctctac
tgggacatgggggcagagactcggaaagatcgaagcaaagcccacacacacctattaaag
gctgcaaagttagatccaaacctgggctgtgcctttcgctacctggggcattattatcgg
gaggtggcaaatgataatggtcgtgcacagggctgctacaagaaggcttttcagctgaac
agtgatgatgttgagtgtggagctgctgctgtagatctcagtatgggacagggggatatg
gacaatgctttagcaatgcttcagtcagtgatcgagaaagctactccaggctcagctaag
tgggcctggatgaggcgaggcctctactacctgaaggttggagaacatcaaaaggccatc
aatgatttgcaggcagcattgagagcagaccctgaggactgggtgtgttgggagtgttta
ggcgaggcttacttaaaccggcggagcttcacagcagctctgaaggcgttcggcaaggcc
catcagcttcagcccagctccatctacagcgtctaccaggcagctgctatcaaacagact
ctgggcaagttcaaagaggctgtggcggagtacttgcaaatcacaacaaagcaggattat
gtccctgctcttaaaggacttggggagtgccagctgtctcttgctaaaagtttaatggag
gactgtcgggatggaggagcaattgacctcattcagcaggccctacaaaacctcttcagg
gctgtgaagctgcgaccagacctgtcttgcttgtggaaacttctgggagatgcctgcacc
gctgctgtcacagtttcaccaaacagggcggaagttctggtgccagctttattggccggt
ttagatcccaacgctccagatccaatacttaaccaggctgacatgctcaaagttggtgag
aggtgctatgctcatgctttgaagttgatgcccgaggctgccagtctttggcacgactta
ggcctcaactattaccatcaggccaccagcttaccttctcttacagagaaagatcaggac
tcccaacctctgaacttaaataaagctcaggagtgcttaagaaaagctatcaagatggac
agtgagaaccacagctactggaatgccttgggagtgatctccatgaataaaggtttggag
aactttgctctggctcagcattgcttcatcaagtccatacaagttgagccaaataatgta
gtggcatggacaaatcttgggagcctctatttgaaaaaagacagtgtagagctggcacat
gaggccttcaaaattgctcagtccttggagccattatatgtcaactgttggattggacag
gcgctgatagcagagcgtgtgggaagctacgacactatggatctgttcaggcacactact
gaactcagcacacatatggagggcgtgaaaggttacgcctactgggtttgttccaccctg
ctggataagaataacagggacactgagctgtaccgctacaatattgtgcaaatgaatgca
atctctgctgctcaggtagcactcagcaaatatacagagagaatccagtctgaccccgat
gccttcattatgctgggctacctgaacgaacatctgcagctgaagaggcaggccttacag
gcataccagcgagcagttgagctgcttcagtcagtgtcctcttcagaagagctggctttt
actcttggcagctatgctcgggctttatgtacctcgggccagtgggaggaggcaatacag
gtgtataattccactcctctgcaggacctcagtgacctggtagggctggctctgacctac
tgcagggcaggactcttccctgaaagcatcagcacttatgagcgagccttggctgtggct
tccagtgagaaggataaagcttacatcctgactgctctggctatgctgcagcaccggcag
ggcaacctcgacttagccaagactctgctctttaaatgctctgtgctaaaggagcccatc
tccgagtcactgctgtgtttatgtgccttgggattggtccgccgtgatgcaacgctagcc
gctgctgccctgaccgagctgctaaaacaaggatcagcctcggcgggtgttgaggagcag
cagtgtctgctcacctgctctttgttggctcttcagggcaattacagtgcagtacaaaga
gaagcctccagagctgtacacagaaatcctggaaacccatctctctgggctcttttgtcc
agagttataccacagtactaccctaaaaaggcaaatggtggagcagtagctggtcacgtt
gcctgtctcgctagtatgactcaaggaaagagggcgctgttgtacagcggcgtgaaccag
ctggccagcggcagacactcaggagaggacgctcagagcaatgccctgaagatgatgcag
agagccgtattactctgtcctgatgatccagcaacatgggctggattaatggctgcctgt
cacactgaaaacacttgctgttatctctctggctctgctcctcgtagacggtcactagaa
catacgctcatgtcggtggtttctgagaaagtacgaagcgtggaggagatagagcgccct
ctagcccagtctcttgaaggctgggtgttacaacaggccgtaaccggtctcatgctggag
ggacaactggaccaggctgagaccctctgcatgcaggtcctaaacgtgtcccctgaacac
ccagcagtgatgctgttgctgagacaggttcagtgtcagcgcctcctcatggctgatggt
ggtactgtcctgccagactctgtcctggagcagctcaacaaagctgtagccatgaaccct
gctaaccttggagcgtggcattggctggctgaggtgtatcggagccagggcctgctggtt
caggctgtcctggcgtacaggcagagtctgcagctagccctgcagcttggcgtgcacagc
taccaggtctccagcctgctccgacttgctctgctagccttgggaccctgcatggcgggt
gtgccaggaaacgagtggaaggatctggtgacggaagccaccactgaagttttgaagctg
ggttcatctcgcatggccctgctttttcaggccttgctccaatttgtgaccaagatgggt
gctagggagacaaggcgcctgctggagaagcaggtttatgcttcatctgaagacgtccca
gagacagtggtgcaggtggccagttggtacctcctcagacacttgcatgctaaaaatgac
caggagctcattaatgtacttttgcaacatgccaaaatgaatggaaatcaaagactgctc
gagcttcactctctgcttaactcttcttcaatctga
DBGET
integrated database retrieval system
