Austrofundulus limnaeus (annual killifish): 106524042
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Entry
106524042 CDS
T06063
Symbol
tcerg1
Name
(RefSeq) transcription elongation regulator 1
KO
K12824
transcription elongation regulator 1
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106524042 (tcerg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
alim03041
]
106524042 (tcerg1)
Spliceosome [BR:
alim03041
]
Complex A
U1 snRNP components
U1 related factors
106524042 (tcerg1)
Complex B
106524042 (tcerg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
RhoGAP-FF1
Motif
Other DBs
NCBI-GeneID:
106524042
NCBI-ProteinID:
XP_013873129
UniProt:
A0A2I4BZJ1
LinkDB
All DBs
Position
Unknown
AA seq
1030 aa
AA seq
DB search
MADQTENESVGFNDNRMVQQAVRFRSPAPAPAPAPVPAPAQTPVLRGPPPLLRPPPPPFG
MMRGPPPRPPFTRPPFDPNMPPIPPPGGMPPPIGPPHLQRPPFLPPPIGNLPPPPGMLFP
PGMPPVPSSGSPALNPTEEIWVENKTSEGKTYYYNARTRESSWSKPEGVKVIQQSELNPL
LVAGASAAGSASNVGVTAAISSSSGNATASTAGAASPTQAPASTLSHSHTSSPDSTTTPS
PSVSIAATVVADLAPVATVTSTVAVSPVTVVTVSTVPSPVTAVQTVPLLPAALPHSVAQP
TAAIPAFPPVMVPPFRVPLPGMHIPLPGVAMVQIVGAPCVKAGPSANGMLPGMGPPLVSM
MHPQLTLSAAPASIAGSLQLPEWSEYKTVDGKTYYYNNRTLESTWEKPQALIEKAKEAEK
AKERLTQEEAEAMEMEAEELKAENTNNEKEEPKVEEMTEEEKAAQKARPIATNPIPGTPW
CVVWTGDDRVFFYNPTTRLSMWDRPDELIGRADVDKHIQEPPHKKGPEDGKKTGVNKEEP
ELSAAAEDVQDDEPTKSKKRKKEDTKETDSEKEAAMEAELRAARERAIVPLEARMTQFRD
MLLERGVSAFSTWDKELHKIVFDPRYLLLNPKERKQVFDQYVKTRAEEERKEKKNKLMQA
KDDFRRMMEEAKLTPKTTFSEFAMKHGRDPRFKSIDKMKDREAIFIEFMTAFRKREKEDS
KSRGEKVKLDFFDLLSEQHIEGSHRWSKVKDRLETDPRYKAVDSSALREELFKQFMEKQA
KNVDIDKEREMERQARIEASLREREREVQKARSEQTKEIDREREQHKREEAIQNFKALMS
DMVRSSDAAWSDTRRNLRKDHRWESASLLEREEKEKLFNEHVEALAKKKKEQFRQLLDET
SMITLTTTWKEVKKVIKDDPRCIKFSSSDRKRQREFEDYIKDKYITAKADFRTLLKETKF
ITYRSRKLIQESDQHLKDVEKVLQNDKRYLVLECVPEERRKLIMFYIEDLDRRGPPPPPT
ASEPTRRSTK
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccagacagagaacgaaagtgttgggtttaacgacaacagaatggtgcagcag
gctgtgcggttccgcagtcctgcccccgcgcctgctccagcccctgtgcctgcacctgct
cagactccggtgttacgcggccctccaccattacttaggccaccgccacctccctttgga
atgatgaggggacctccrccaagacccccatttactcggccaccctttgaccctaacatg
ccaccaatcccaccaccaggaggcatgccaccgcctattggaccacctcaccttcagagg
cctccatttctcccccctcccattgggaacttgccgcctcctcctgggatgttgttcccc
cctgggatgccccctgttccttcatctggaagccccgctcttaaccccacagaggagatc
tgggtggagaataagacatctgaaggaaagacgtattactataacgctcggaccagagag
tcttcatggagcaagccagagggtgtgaaggtcatccagcagtctgaactcaaccctctt
cttgtggcgggggcttcagctgcaggttcagcttcaaatgtgggtgtgactgcagccatc
agctccagcagtggcaacgctacagctagcacagcgggggcagcctcccccactcaagct
ccagcctccaccctgtcccactcacacacctccagccccgactccaccaccacaccctcg
ccctctgtgtccatcgcagccaccgttgtagcagacctcgcccctgttgccacagtgacc
tcgactgttgctgtgtccccagtcaccgtagtgactgtttccacggtgccgtcacccgtc
acagctgttcagactgtgccactgctgcctgcagctctgcctcacagtgtggcccagccc
actgcagccatacctgccttcccccccgtcatggtgccaccttttcgggttcctttacca
ggcatgcacatccctctaccgggtgtagcaatggtgcagatagtaggtgcgccctgtgta
aaggcaggccccagcgccaacgggatgctccctggcatgggcccacctctagtttccatg
atgcacccccagctgacgctttcagcagcacctgcttctatagctggatcgttgcagctc
cctgagtggtcggagtacaaaacagttgatgggaaaacgtactactacaacaaccggacg
ctggagtccacctgggagaaaccacaggctctaatagaaaaggcaaaagaagcagaaaag
gctaaagagcgtctgacccaggaggaggccgaggcgatggaaatggaagcggaggagctc
aaagcagaaaacactaataatgagaaagaggagcctaaagtagaggagatgacggaggag
gaaaaggcagctcagaaagccaggcctatcgccaccaacccaatccctggcacaccttgg
tgcgtcgtgtggacaggagatgatcgcgttttcttttacaacccaacgactcgactgtcc
atgtgggatcgacccgacgagctgatcggccgggccgacgtcgacaaacacatccaggag
cctccacacaagaaaggccccgaggatggcaagaagacaggtgtcaataaggaggagcca
gagctctctgctgctgctgaggatgttcaggatgatgagccaaccaaatctaaaaagaga
aaaaaggaggacacgaaggagacggactcggagaaagaagcagcgatggaggcggagctc
agagcggccagagaaagagctatagtgcccctagaggccaggatgactcagttcagagac
atgctgctggagagaggggtttctgctttttcaacttgggacaaagaactacataagatc
gtgtttgacccacgttatcttctactcaatccaaaagaaagaaaacaggtttttgatcag
tatgtgaagacgcgagcggaggaggagaggaaggagaagaagaacaagctgatgcaggcc
aaagatgatttcaggagaatgatggaagaggccaagctcacacccaaaaccacgtttagt
gagtttgccatgaagcacggcagagatccacggtttaagagcatcgacaagatgaaggac
agggaggctattttcatcgaattcatgacagcatttaggaagagagagaaggaggactcc
aaatccagaggagagaaggtaaagctagacttctttgatctcctgagtgagcagcatata
gagggaagccatcgatggagcaaagtgaaggatcggttagagaccgaccctcgttacaag
gctgtggacagctctgcgctcagagaggagcttttcaaacagttcatggaaaaacaagca
aagaatgtggacattgataaggagcgtgagatggagcgacaggctcgaatcgaggccagt
ctcagagagcgggagcgggaggtgcagaaggcccgatcggaacagaccaaagagattgac
cgagagagggagcagcacaaaagagaggaggccatccagaacttcaaagctctcatgtct
gatatggttcgctcttcagatgcagcgtggtcagacacccgccgcaacctgaggaaggac
catcgctgggaatcagcatcgctgctggaaagagaggagaaagagaagctgtttaacgaa
cacgtcgaagctttggccaagaagaagaaagaacaattcagacagctgctggatgagacc
agcatgatcactttaacaactacatggaaggaagtgaagaaagtaatcaaggatgaccct
cgctgtattaaattctcctccagtgacagaaagagacagcgggagtttgaagactacatc
aaagacaaatacatcaccgccaaggctgacttcagaactctgctgaaggagacaaagttc
atcacgtacaggtcaagaaaactgatccaggagtcagatcagcatctgaaggatgtggag
aaggtccttcagaatgacaagcggtacctcgttctggaatgtgtcccagaggaacgcagg
aagctcatcatgttctacatcgaagacttggaccgacgtggcccsccgcccccacccact
gcctccgagcccacccgacgatctacaaagtga
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