Austrofundulus limnaeus (annual killifish): 106528741
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Entry
106528741 CDS
T06063
Symbol
lama5
Name
(RefSeq) laminin subunit alpha-5
KO
K06240
laminin, alpha 3/5
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04382
Cornified envelope formation
alim04510
Focal adhesion
alim04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106528741 (lama5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106528741 (lama5)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
106528741 (lama5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
Laminin_B
EGF_LMN_ATRN
Motif
Other DBs
NCBI-GeneID:
106528741
NCBI-ProteinID:
XP_013879442
UniProt:
A0A2I4CHI1
LinkDB
All DBs
Position
Unknown
AA seq
1939 aa
AA seq
DB search
MLGFGPVVRLLWPLLVSCCRPSSAQELLANGLNGYSLHPPYFNLAEGTKITATATCGEDE
SGRSLQDLYCKLVGGPVSGDPSQTIQGQYCDICSKEDGDRAHPITNAIDGTERWWQSPPL
SRSTEYNELNVTLDLGQLFHVAYVLIKFANSPRPDLWVLERSTDFGQTYQPWQYFASSKR
DCIERFGQRTIERISSDDDVICTIEYSRIVPLENGEIVVSLVNGRPGAMNFSYSPVLREF
TKATNIRLRFLRTNTLLGHLMGKALRDPTVTRRYYYSIKDISIGGRCVCNGHAEACDAKD
PNDPYKLQCDCQHNTCGVSCDQCCPGYHQLPWKPATTYSANECESCNCHRHSFDCYYDPD
VDRRRASVDLHGHHRGGGVCLNCQHHTMGINCERCLPTFYRSPDHPIDSPQACLPCNCQS
EFTDGTCEDLTGRCFCKPNYAGENCDSCASGFINFPECYPIPTYPPNNNGEAKPAGEIIN
CECSAAGTVDNSCRPDPRTQTCICKPGFTGDHCDTCAPGFYGLNCQACQCSGPGCLDGSC
DLITGSGICRSGFHGYQCDQCAPGYFNYPLCQLCGCSSLGSLPAGCDASGHCLCKAEFQG
PRCEQCRSGFHSYPNCRECSCDLRTSLNTNCTTSGICHCRPNYSGASCDQCAPGYYGYPT
CTACRCSSEGSRYRSCEQLTGQCVCLPGVGGLRCDSCAHGAYGFPRCQAGACHPAGSVQS
AVLPSVGECECRRHVEGPACDKCKPLFWNLSPDSVDGCSDCECNTAGTLSAVAECEQERG
QCHCKPNVCSGTCSTCKDGFYNLQDHDYFGCQGCRCDTGGSVGQFCGDRNGQCRCRPNVE
GPQCNLPRPDHYFPDLHHLKFEIEEGSMLDGRPVRFGYNLLEFPDFSWRGYAQMSPIQSK
VLVSVLVTSPDLFHVVLRYANWGGSAVRGRVAIVEDSWNYYFGNCSEQSKQILFTPSSQP
TFINVPQNNYVEPFVLNPGTWTVVIEAEGILLDYLVLLPSAYYEAPILQMRVTDPCTYSS
VSHSTQNCLLYRYLSLDSFPSISGNDASCRNDNHLPRPCPTEKVTPRHPTMAVCSGXDIS
VDLGGHVSSPGDHVLIVEYSSEEELPQTLSVVVNTPVARKNQHRVTLLHCTYSFLCRAVV
MDEQNRVAVFTLPADTQVQLTSNRASFFLNKVYLVPKALFNMEYVEPKVHCISSHGLFSP
DSSSCVPSRFQTPTDSLVLKEGQSSSTQEEIFHVSPAAGPPLSVHQGQEPVWIEGVRPPF
GADSSSHMRLDSLQNAVVYSARVQSPGRYIFILHFHQPLHPTYPVQVYINGGRIWQGITN
ASFCPHAYGCRNVLVSENQIILDVTQHSLFLTVQIPADKTLWLDYVLVVPETSYSSSYLN
EEPLDKSYDFISSCGQNSFYINPSTASPFCLSSAISLSAFFNNGALPCACHEVGAESDTC
EQFGGQCKCRPNVIGRDCSMCATGFWGFPNCRPCNCGPRLCEPVTGDCICPPRTLRPECT
QCEPQTFGCHPLVGCEVCNCSHPGVVSSDVSCDTFSGQCSCKNNVVGRRCDHCAPGFYGY
PNCRPCDCNEAGTEEGVCDSFTGQCLCKENVQGSRCDQCRIGTFHLDPTNPKGCTSCFCF
GATDRCHSSNKRRTEIMDMEGWVLLGADRQEVPVTVYPDQDLVEADLSDVPDVYQDLHWH
APNKYLGDKVSSYGGYLRYRLHTQAMRGDALPLPAEASRPDIILKGNQMTLVFMEREYSS
PEEPHLGIVHIVEGSFRHAQTGNSVSREELMMVLVDLESLQVRALHSQSAHSVSLRGAVL
EGAENLPTGRHANNVEICTCPANYHGDSCQTCAPGFYRDTIGLFLGKCVPCSCNGHSDQC
LDGSGICVNCLHDTIGNHCEGCKGGFHSNNSLDGQAVSCSSCPCPLRAPSNNFAEGCVQR
GDRMQCLCMHGYAGPNCER
NT seq
5820 nt
NT seq
+upstream
nt +downstream
nt
atgctggggttcggaccggtggttcggctgctgtggccgctgctggtgagctgctgcagg
ccgtcttcggcccaggagctgctggccaacgggctgaacggatacagcctccacccgccc
tacttcaacctggcggagggcacgaagatcacggccaccgccacctgcggggaggacgag
tccggccggagcctgcaggacctttactgcaagctggtggggggcccggtgtcaggggac
ccgagccagaccatccaggggcagtactgtgacatttgcagtaaggaggacggtgaccgc
gcccatcccatcaccaacgccatcgacgggactgagcgatggtggcagagcccccccctg
tcccgcagcaccgagtacaacgagctgaatgtcaccctggacctgggccagctctttcat
gtggcctacgtcttgattaaatttgccaactctcctcgaccagacctgtgggtcctggag
aggtccacggacttcggacagacctaccagccctggcagtactttgcctcctctaaaaga
gactgtatcgagcggttcggacagaggaccattgagaggatcagctctgatgatgacgtc
atctgcaccatcgaatactcacggatagtgccattagaaaatggagagatcgtggtgtcc
ctggtgaacggtcgtcccggagccatgaacttctcctactcaccagtgctgagggaattc
accaaggccaccaacatccggctgcgyttcctgagaaccaacacgctgctggggcacctg
atgggcaaggcactgcgggatcccaccgtcacccgcaggtattactacagcatcaaagac
atcagtattggaggacgatgtgtgtgtaatggacacgctgaggcctgcgacgccaaggac
cctaatgacccctacaaattgcagtgtgactgtcaacataacacttgtggtgtgtcctgt
gaccagtgttgtcctggatatcatcagttaccatggaaacctgccaccacctacagtgcc
aacgaatgtgaatcctgtaactgtcaccgtcattctttcgactgttactacgatcctgac
gtcgatcggaggagagccagcgttgaccttcacggacaccaccgaggaggcggagtctgc
ctcaactgccagcatcacaccatgggaattaactgtgagcgctgcctccccaccttctac
aggtcacctgaccaccccatcgactccccccaggcctgcttaccctgtaactgtcagtca
gagtttacagacggtacctgcgaggatctgaccggacgctgcttctgcaaaccaaattac
gctggagagaactgtgactcctgcgccagcggcttcatcaacttccccgagtgttacccc
atccccacctatccccccaacaacaacggggaggccaaaccagccggagagatcatcaac
tgtgagtgcagtgcagcaggtacagtggataactcctgcaggccggaccctcgcactcag
acctgcatctgtaaaccaggattcaccggagaccactgtgacacatgcgctccgggtttc
tacggactcaactgtcaggcctgtcagtgttctggtccaggctgtctggacggatcatgt
gacctgataactggcagtggaatatgtcgaagtggttttcatggttaccagtgtgatcag
tgtgctcctggttacttcaactaccctctgtgtcagctgtgcggctgcagctcgttgggc
tctctgcctgcaggctgcgatgcttccggtcactgcctgtgtaaagcagagtttcagggt
cctcgctgtgagcagtgcagatctggattccactcctaccccaactgtcgagagtgttcc
tgtgatcttcggacctcactgaacaccaactgcactacatcagggatctgtcactgcaga
cccaactacagcggagcatcatgtgaccagtgtgcccccggttactatggttaccccacc
tgtacagcctgtcggtgttcctctgaagggtcccgctacaggagctgcgaacagctaaca
ggacagtgcgtgtgcctgcccggcgtgggggggctcaggtgtgacagctgtgcacacgga
gcctacggcttccccaggtgtcaagctggtgcctgtcatcctgccggctcggttcagtct
gcagtcctgccatcagtgggggagtgtgagtgtcgtcgtcacgttgagggtcctgcctgt
gacaaatgtaaacctctgttctggaacctctcccctgattctgtggatggatgctccgac
tgcgagtgcaacacggcagggactctgagcgctgtggctgagtgtgaacaggaaagaggt
cagtgccactgtaaacccaacgtctgcagtggaacctgctcgacttgtaaagacggcttc
tacaacctgcaggatcacgactactttggctgccagggctgccggtgtgacactgggggg
tcggtgggtcagttctgtggagacagaaatggtcagtgtcgttgcagacccaacgtagaa
ggacctcagtgtaatctgcctcgtccagatcattactttcctgacctccaccatttaaag
tttgagattgaggagggatcgatgctggatggccggccggtccgattcggatataacctc
ctggagttcccagactttagttggagaggttatgctcagatgtcccccatccagtccaaa
gtgttggtgtcggtgttggtcacctctccagacctcttccatgtagtgcttcgttatgcy
aactggggtggttctgctgttcggggcagggtggcgatcgtagaggacagctggaattac
tactttgggaattgttcagaacaatccaaacaaatcctctttactcccagctcccagcca
accttcatcaaygttccccagaacaactacgttgagccatttgttctgaacccagggacc
tggactgtggtcatagaggctgaaggaatccttctggactacctggtgctgctgcccagt
gcgtactacgaagctcccatcctgcagatgagagtcactgatccttgcacctacagctct
gtttcacacagcacccagaactgtctgctgtaccggtatctgtctctggactccttccct
tccatctcgggaaacgacgccagttgccgtaatgacaaccacctgccgcggccctgccca
acggagaaggtcaccccgcgccatcccaccatggccgtctgcagcggcwtggatatcagc
gtggaccttggagggcacgtgtcgtctccaggagatcacgttctgattgtggaatactca
agtgaagaagaattacctcagactctgtctgttgttgtcaacacaccagttgcacggaaa
aatcagcaccgagtcaccctgctgcactgcacgtacagcttcctgtgtcgagccgtggtg
atggatgaacagaacagagtggcggtcttcactctgcctgctgacacacaggtccagctc
acatccaatcgggccagcttcttcctgaacaaagtgtacctggtgcctaaagccctgttc
aacatggagtatgttgaacctaaagtccactgcatcagctctcatggacttttttctcct
gacagttcctcctgtgtcccatcacgcttccagacaccaacagactctctggtcctgaag
gagggccagagctcctccacgcaggaggagatcttccatgtgtctccagcagcaggtcct
cctctgtctgtccaccaaggccaggagcctgtctggatagaaggagtcagacctcccttt
ggagcagacagcagcagtcacatgcgactggactcgctgcagaatgctgttgtgtactca
gctcgtgtccagtctcctggacgctacatcttcatcctccactttcaccagcctcttcat
cccacctatccggtgcaggtctacatcaatggaggacggatctggcagggtatcaccaac
gcctccttctgtcctcatgcctacggctgccggaacgtgctggtctctgagaatcagatc
atcctggacgtgacgcagcacagcctcttcctcacagttcagatacctgcagataaaacc
ctgtggctggactatgtgctggtggttcctgagacgagctacagctccagttacctgaay
gaagaacctctggacaagtcctatgacttcatcagcagctgtggccaaaacagcttttat
attaatccgtccacagcctcaccgttctgcctcagctccgccatttctctgtcagcgttc
ttcaacaacggggccttgccctgtgcctgccatgaggtgggggccgaaagcgacacctgc
gagcagtttggcggtcagtgcaagtgtcggccaaatgtgattggacgagactgttccatg
tgcgccacgggcttctggggcttccccaactgcaggccgtgtaactgtggtccgaggctg
tgtgagcccgtcacaggggactgcatctgtcctcccaggacattgcgccccgaatgcacc
cagtgtgaacctcagacgttcggctgccacccactggtgggctgcgaggtctgcaactgc
tctcatcccggagtggtctcctctgacgtgagctgtgacacgttcagcggacagtgcagc
tgtaagaacaatgttgtcggtcgccggtgcgaccactgcgcccctggtttctatggttac
cccaactgtaggccatgtgactgtaacgaagcgggaacagaggagggcgtgtgtgactcc
ttcacagggcagtgtctctgcaaggagaacgtccagggttctcgatgcgatcagtgcagg
atcggtacatttcacttggacccaaccaaccctaaaggctgcaccagctgcttttgtttt
ggagccacagatcgctgccacagctccaacaaaagacgcacagagatcatggacatggag
ggctgggttctgctgggagcagacagacaggaggtcccggtcacggtgtaccctgatcag
gaccttgtggaggctgacctcagtgacgttcctgatgtctaccaggacctccactggcac
gcacctaacaagtacctgggagacaaggtctcgtcttatgggggatatctgaggtatcgt
cttcacacgcaggcgatgagaggggatgcactgcccctgccagctgaagcttccaggcct
gatatcatcctgaaggggaaccagatgaccctggtgttcatggagagagagtactcctca
cctgaagagcctcacctgggaatagttcacatagtggagggaagtttccgtcacgctcag
acagggaactctgtgtctcgggaggagctgatgatggttttggtcgacctggagtctctg
caggtccgagcgctccactctcagtcrgcccactcggtgtcactgcgcggcgctgtgctg
gagggggccgagaacctgccgactggacgtcacgccaacaacgtggaaatctgcacgtgt
cccgccaattaccatggagattcatgtcagacatgtgctccaggtttctacagagacacc
attgggctgtttctgggaaagtgtgttccctgtagctgtaacggacactcggaccagtgc
ctggatgggtctggaatctgtgtgaactgcctgcatgacaccatcggcaaccactgtgag
ggatgtaagggtggtttccatagtaacaacagcctggatggacaggcggtgtcctgctcc
agttgtccctgtccactgagggccccgtccaacaattttgcagagggctgtgtgcagagg
ggtgacaggatgcagtgtctgtgtatgcacggttacgcaggaccaaactgtgaaaggtaa
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