Austrofundulus limnaeus (annual killifish): 106530005
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Entry
106530005 CDS
T06063
Symbol
cngb1
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
106530005 (cngb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
alim04040
]
106530005 (cngb1)
Ion channels [BR:
alim04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
106530005 (cngb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
cNMP_binding
Pyr_redox_3
Motif
Other DBs
NCBI-GeneID:
106530005
NCBI-ProteinID:
XP_013881006
UniProt:
A0A2I4CLY9
LinkDB
All DBs
Position
Unknown
AA seq
705 aa
AA seq
DB search
MKTWSSQGDPLNADDEMRPVSTASIGSTGVQERLNELVKLFKGRTERHKDRLVDPDASEE
DSPTTSPSKAPPPPVPPPPPGGEKKDDTTAAKEEDEEAIQFELLGYPVKIPKLPPIPDWL
QAILDYRFPSSIDPFTDLIYVVWLFFVVAAWNWNVWLIPVRWAFPYQTPENIHLWLLADY
TCDFIYVADILIFQPRLQFVRGGDIVCDKKDMREHYMTTERFKMDVISLFPMEVFYFFTG
VNSLLRFPRLLKYMVFFEFNDRMEAVMKKAYIYRVIRTSMYLLYSLHINACLFYWGSDYE
GLGSTKWVYNGEGNAYIRCYYFAVKTLITIGGLPDPTTVFEICFQLINYFVGVFAFSIMI
GQMRDVVGAATAGENYYRACMDSTVKYMNSYSIPRDVQNRIKTWYDYTWKSQGMLDEQEL
LVQLPAKMRQDMAVDVNYSIVSKVALFQGCDRQMVFDMLTRLKSVVYLPGDFVCKKGEIG
REMYIIKQGEVQVVGGPDLQTVFVTIRAGSVFGEISLLAGGGGNRRTANVKAHGFANLFI
LDKNDLAEILVHYPESQKLLRKKAKKMLTKDKKPDEAEARKEAAEVIPPRPDTPKLFKAA
LKVTEQAGIEGTFAKLKQVYRPAESSSEAPPTVSPVPPPSPTHRRLPAPQSAALEDGDES
VAETADSSVIIRMTPREKGEEILTVEVVVAEEEAEEAMEDEKAEG
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgaagacctggtcaagtcagggagatccactgaacgctgatgatgagatgcgtccagtg
tccactgctagcatcggcagcactggagtccaggagcgcctgaatgagttggtcaagctc
ttcaaaggtcgaacagaacgccacaaagaccggctggtggacccagacgcatctgaggag
gacagtcccacaacctccccaagcaaagctccaccgcctcctgttccaccacctcctcca
ggaggggagaagaaggatgacacgacagcagcaaaggaagaagacgaggaagcgatccag
tttgaacttctggggtatcccgttaaaattccaaaacttccaccaatccccgactggctg
caagctatcctggattaccgcttcccctccagcattgacccatttacagatctaatttac
gtggtctggttgttcttcgtggtggcggcgtggaattggaacgtgtggctgatccccgtc
cgctgggcgttcccctaccaaacacctgagaacatccacctgtggctgctggccgactac
acctgcgacttcatctacgtcgccgacatactgatcttccagcccagactgcagtttgtc
cgtggaggagacatcgtgtgtgataaaaaggacatgagggaacattacatgaccactgag
aggtttaagatggacgtgatcagcctgtttcccatggaggtgttttacttcttcacagga
gtgaactctctgctgaggttccctcgtctgctgaagtacatggttttctttgagtttaac
gacagaatggaggctgtcatgaagaaagcgtacatctacagggtgatccggacctccatg
tacctgctttactctctgcatatcaacgcctgcctcttttactggggttctgactacgag
ggactgggatccaccaaatgggtctacaacggagaaggcaatgcttacattcgttgttac
tactttgctgtgaagacgctgatcaccatcggcggactgccggaccccaccaccgtcttt
gagatctgcttccagctcatcaactactttgttggtgtttttgctttctccatcatgatt
ggccagatgagggacgtggttggagctgcgactgccggggagaactactaccgagcctgt
atggacagcaccgtcaagtacatgaactcctacagcattccacgagacgttcagaaccgc
atcaagacctggtatgactacacctggaagagccagggcatgctggacgaacaggagctg
ctggtgcagcttccagctaagatgaggcaggacatggccgtggacgtcaactactccatc
gtcagtaaagtggccctgttccagggctgcgacaggcagatggtgttcgacatgctgacc
cggctcaagtccgtcgtctacctgcccggagacttcgtgtgtaaaaagggagagatcggc
agagagatgtacatcatcaagcagggggaggttcaggtggtggggggtccggacctgcag
acggtcttcgtcaccatcagagccggctcggtgttcggagaaatcagtctgcttgcagga
ggtggaggaaaccggcggaccgccaacgtaaaggcacacggatttgccaacctgttcatc
ctggataaaaacgacctggcagagatcttggttcattatcccgagtctcagaaactcctg
cggaaaaaagcaaagaagatgctgacgaaagacaaaaagccggacgaggcggaggcccgg
aaagaggcggcggaggtcatcccccctcgacccgacacccccaaactcttcaaagctgct
ctgaaggtgacggagcaggccgggatcgaaggaaccttcgccaagttgaagcaggtctac
agaccagcagagagctcctcagaggctcctcccaccgtttctccggtcccgcctccatca
ccaacgcaccggcgccttccggctcctcaaagtgcagcactagaagacggagacgagtcg
gtggcagagacggcggacagctccgtcatcatcaggatgacgccacgagaaaaaggggag
gagattctgaccgtggaggtggtcgtagccgaggaagaggcagaggaggcgatggaggat
gagaaagcagagggatga
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integrated database retrieval system
