Austrofundulus limnaeus (annual killifish): 106533399
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Entry
106533399 CDS
T06063
Symbol
nod1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1 isoform X1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04621
NOD-like receptor signaling pathway
alim05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
106533399 (nod1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
106533399 (nod1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
alim04054
]
106533399 (nod1)
Pattern recognition receptors [BR:
alim04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
106533399 (nod1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
CARD
NLRC4_HD2
LRR_4
NOD2_WH
AAA_16
AAA_22
CRS1_YhbY
RsgA_GTPase
ATPase_2
RNA_helicase
AAA_30
FumaraseC_C
Motif
Other DBs
NCBI-GeneID:
106533399
NCBI-ProteinID:
XP_013885118
UniProt:
A0A2I4CYQ1
LinkDB
All DBs
Position
Unknown
AA seq
941 aa
AA seq
DB search
MVQXEEANMSCLNILTQHRELLVSSLRSIQCLLDNLLACGFFCQEDVEIVQRTATKPSQV
RKILELVQCKGEEACDYLIFIIYKVRDAYIDLQPWLRGIAYRPSSNVAEIKVVNTDPISR
FCEKLRDEMSRDTSFIMSYSQQDETRLEDLYTDTVMELLNDCNESLGFIDSLNQFLGDEG
VFNPQGEIIYVMGDAGVGKSILLQKLQNLWSKKELQTDAIFFFKFRCRMFSVFKEXEQIS
LRDLLFKYNCYPDHDPDNEVFXYILRFPEKVVLTFDGYDEIQEVVDQMNXPEMVSPEDKA
NPLQLLNSLLSGKLLKGSKKVLTTRTGDEMQSRVIKKKVMLRGFSPDHQKSYIQLHFKEQ
EHRELVSVQLDASPHLCGLCSTPLFCWIVFKSFSHLHTVHDSFQLPETCITLTDIFLLLS
EVFLSRSASPAPSLLKKSTRCTSETFRAGLRPLAAFAKLALQGLKEGSFLCSQTEISESG
LTEEDMAMGFLRPVRDCNTSGEPATFEFIHTTLQSFLAAFALVLDEEAPPTSILRFFTEC
SRNRPQPCLPLAWCVSKSVNSGENRPVATNQRLQFTNLFLSGLLSKNNTSLMGHLVPLAL
LKKKRALLKSYLSNSVKSHLQSLPIFQGNEGKKVHVLPNFLWILRXIFETGSKDIAKMTA
KGITAGFIKLGYCNVSSGDCTAINFVLQHRQKLLGLDMDNNIISDYGVKQLRPSFCMMTV
VRLCVNNLSDSSIEVLAEELCKHKVVKVLGLYDNNITDTGAKLVAKIIEECPKLEVVKIG
KNKITEVGGRFLASAVQKSTSIFDVGMWGNSIGDEGAEAFAEALKNHPRLTNLSLSANGI
TSNGGKFLAKALLQNSVLRIFWLVQNELADDAAPQLAELVRADTGLSHLWLINNRFTAAG
IRTLAAALDHNSKLKEICVKGNLLSEEEHQEFLXQKRLRFH
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggtccagatrgaagaagccaacatgtcctgcctgaacatcctgacccagcacagagag
ctgctggtctccagcctcaggagcattcagtgtctcctggacaacctgctggcgtgtggt
ttcttctgtcaggaggacgttgagattgtccaacgaaccgccaccaaaccaagccaggtg
cgcaaaatcctggagttggttcagtgcaaaggagaagaagcctgtgactatttgattttt
ataatttataaagtgcgtgacgcctatattgacctccagccatggcttagagggattgct
tacagaccaagcagcaatgtagcagagattaaagtagttaacacagatccaatcagtagg
ttctgtgagaagctgcgagacgagatgagccgagacaccagcttcatcatgtcgtacagt
cagcaagatgagacccggttagaggatctgtacacggacaccgtgatggaactgttgaat
gactgcaatgaaagccttggttttattgactctttgaaccagttcctgggggatgagggg
gttttcaatcctcaaggtgagatcatctatgtgatgggagatgctggtgtggggaagtct
atccttctgcagaagctgcagaacctctggtccaaaaaggagctgcagacagatgctatc
ttttttttcaagttccgctgcaggatgttcagcgtctttaaagaarcagagcagatatcc
ctcagggatcttttgttcaagtacaactgctacccggatcacgatcccgacaatgaagtc
ttckattacatcctgcgctttccggagaaggttgttttgacttttgatggttatgatgag
attcaggaggttgtagaccagatgaatkttcctgagatggtgtctccagaggacaaggct
aacccccttcagctgctcaacagcttgctctctgggaaactactcaagggctccaagaag
gtgctcacgactcgaacaggggatgaaatgcaaagtcgggtgatcaaaaagaaggtgatg
ttacgagggttttccccagaccaccaaaagtcgtacatacaactgcacttcaaggaacag
gagcatcgggagctggtgtcagttcagctggatgccagccctcacctctgtggcytgtgt
tccactccgttgttctgctggattgtattcaagagctttagtcacctgcacacggtgcat
gatagtttccaactgcctgaaacctgcatcacacttactgacatctttctcctgctgtcc
gaggtcttcctcagccgctcagcgtcccctgctccttccctgctgaagaaaagcacccgc
tgcacctcggagactttccgagctgggctcaggcctcttgctgcctttgctaagctggcc
ctgcaaggtttgaaggagggtagtttcctctgcagccaaacagaaatcagtgagtctggt
cttacggaggaggacatggccatgggttttctcagacctgtcagggactgtaacaccagt
ggagaaccygctaccttcgaattcatccacaccaccctccagtctttcttggctgcgttt
gctctggtgttggatgaggaggccccgcccacttccatcctcaggttcttcacagaatgc
agcagaaatagaccacagccttgtctgcctttggcttggtgtgtcagcaagtctgtcaat
tccggtgaaaataggccagttgcaacaaaccagcgccttcagtttacaaatctgttcttg
tctggactgctgtcgaaaaacaacacaagtctgatgggacatctagtacctcttgcttta
ctaaagaagaagcgagccttgttgaagtcttatctgtccaacagcgtcaagtcccacctg
cagagcttacccatctttcaaggtaacgaaggcaaaaaagttcatgttttgccmaacttt
ctttggatattaagatrcatctttgagacaggaagcaaagacatcgctaagatgacagct
aagggcatcacagcgggtttcatcaagctggggtactgtaacgtgtcctcaggggactgc
accgccataaactttgtgctgcagcaccgtcagaagctgctgggtcttgacatggataac
aacatcatcagtgattacggcgtgaagcagctccggccttcgttttgcatgatgacggtt
gtgaggttgtgtgtcaacaacctgtccgacagcagcatcgaggttctagcagaggagctg
tgcaaacacaaggtggtgaaggttctggggctttacgacaacaacatcactgatactgga
gccaagctggttgctaagattattgaagaatgtcccaagctggaagttgtcaagattggt
aaaaacaaaatcacagaggttggtggaaggtttttggccagcgcagttcagaaaagcact
tctatatttgatgtggggatgtgggggaacagcatcggtgatgagggagcagaagctttt
gctgaagctttgaagaaccacccgaggctcaccaacctcagtctgtcagccaatggcatc
acttcaaatggagggaagttcctggcaaaagcactgcttcagaacagcgtcctgaggata
ttctggttggtgcagaatgagttggctgatgatgcagctccacagctggcagagttggtc
cgagcagacactggtctgagtcacctttggttaattaacaacaggttcactgcagctggg
atcagaaccctggctgctgctctggatcacaactctaagctcaaagagatctgtgtgaaa
ggaaacctgctctctgaagaggaacaccaagagtttctgcyacaaaaacgtctacggttc
cactga
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