Austrofundulus limnaeus (annual killifish): 106533619
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Entry
106533619 CDS
T06063
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like
KO
K04834
voltage-gated sodium channel type II alpha
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
alim04040
]
106533619
Ion channels [BR:
alim04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
106533619
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
GPHH
ATP-synt_B
Spem1
IQ
Motif
Other DBs
NCBI-GeneID:
106533619
NCBI-ProteinID:
XP_013885444
UniProt:
A0A2I4CZN8
LinkDB
All DBs
Position
Unknown
AA seq
2013 aa
AA seq
DB search
MAQLLVPPGPDSFRPFVPESLSAIERRIAEEKARRPRSARRSDDDDENGPKANSDLEAGK
SLPFIYGDVPPSLVSTPLEDLDPYYSNQKTFIVLNRGKAIFRFNATSALYILNPFNPLRR
LAIKVLVHSMFSMLIMFTILTNCAFMTLSNPPEWAKNVEYTFTGIYTFESLIKILARGFC
VGKFTFLRDPWNWLDFWVILMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCMRIVNHDNSSDVNATAANDTSL
LGLNATFNWTEYISDESNYYYLPGRRDALLCGNGSGAGLCPEGFVCIKGGRNPDYDYTSF
DTFSWAFLSLFRLMTQDFWENLYQQTLRAAGKPYMVFFVLVIFLGSFYLINLILAVVAMA
YDEQNQATIEEAQQKEEEFQAMLEQLKRQQEEAQAAAAAAAAAVATEDGEYSGRGGLTSE
SSSGTSKLSSKSAKERRNRRKKRKQREEEEERGVRDKFRKSESEDSIKRSSFRFSIDANR
LSYEKRCSSPNQSLLSVRGTLFSPRRNSRASLFSFRGRARDMGSENDFADDEHSTFEESD
SRRGSLFLPRRLERRCSAVSQTSLGVPRIVLPANGKMHCSVDCNGVVSLVGGTSVTTSPV
GLLLPEGTTTDTEIKKRRSGFLQPSMDYLEEPGARQRAMSVASILTNTMEELEESRQKCP
PCWYRFANTCLIWDCCPAWLKIKDVVSTVVMDPFVDLTITICIVLNTLFMAMEHYPMTSQ
FDNVLSVGNLVFTGIFTAEMCFKIIALDPYYYFQEGWNIFDGIIVSLSLMELGLANVEGL
SVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKS
YKECVCKISDDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQSMCIIVFMMV
MVIGNLVVLNLFLALLLSSFSADNLAATDDDSEMNNLQIAVGRIQRGISYVKSKVRQLVR
SLCFGGGKGSGLAEESKPLDELHSNGKGNCISNHTPLEITKDLGGVYTMEGNGRPGGGLV
VGVGGDTAGQYPMEECDYMSFIHNPSLTVTVPIAVGESDFENLNTEDFSSDSSDLEGSKE
KLDVDPQPLSSSEGSTVDIRPPADGVESVELEPEESLDPEACFTEGCVRRFQCCQVSEDV
GWFKSWWTLRKTCFIIVEHNWFESFIIFMILLSSGALAFEDIYIEQRRTIKTVLEYADKV
FTYIFILEMLLKWVAYGFVKYFTNAWCWLDFLIVDVSLVSLVANALGYSELSAIKTLRTL
RALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYHCVN
TTTDELLPISIVNNKTECLNLYNSTRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAA
VDSRGLEDQPDYEVNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMT
EEQKKYYNAMKKLGSKKPQKPIPRPTNAFQGFVFDCITKQAFDIIIMILICLNMVTMMVE
TDDQTEDMDRILYWINLVFIVLFTGECALKMISLRHYYFTIGWNIFDFVVVILSIVGMFL
SEVIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVM
FIYAIFAMSNFAYVKRESGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNKREPDC
DSQMEHPGNSYKGNCGNPSVGIFFFVSYIIICFLIVVNMYIAVILENFSVATEESAEPLS
EDDFEMFYEVWERFDPDATQFVEYSKLSDFADALDPPLRMPKPNMTQLITMDLPMVSGER
IHCLDILFAFTKRVLGEGGEMDMLRGQMEERFMASNPSKVSYEPITTTLRRKQEETSAII
IQRAFRLYMIRQAMKKASALYKEQLKEGVRDPDKDVMVIGKFNENSTSDKTDMTPSTASP
PSYNSVTKSDKDKYEKETREKENKGKDLKDRKK
NT seq
6042 nt
NT seq
+upstream
nt +downstream
nt
atggcacagctgcttgtaccgcccggaccagacagcttccgccccttcgtccccgagtcg
ctgtctgccatcgagaggcgcatcgccgaggagaaggcccggagaccgcggtcggcgcgc
cgcagcgacgacgacgacgaaaatggacccaaggccaacagtgacctggaggcggggaaa
tccctccccttcatctacggggacgtccctccctccctggtgtcaactcctctggaggac
cttgacccctactacagcaatcagaagaccttcatagtattgaatcgcgggaaggcaatc
ttccgtttcaatgccacttctgccttgtacatcctaaaccccttcaaccctctaagaaga
ttagctattaaagttttagtgcactcgatgttcagcatgttgatcatgttcaccatcctg
accaactgtgcttttatgaccctgagtaatcccccggaatgggccaagaatgtagagtac
accttcacagggatttacaccttcgagtctctcatcaagatcctggcccggggcttctgt
gtggggaagttcaccttcctgcgggacccgtggaactggctggatttctgggtcatcctc
atggcatatgtcacagagtttgtggacctgggcaatgtctcagcactgcgaaccttcagg
gttctgcgagctctgaaaacaatatcggtcatcccaggcttgaagaccatcgtgggcgcc
ctgatccagtcggtgaagaagctgtcggacgtaatgatcctcactgtcttctgcctcagc
gtcttcgccctgatcggcttgcagctcttcatgggcaacctgaggcagaagtgcatgcgc
atcgtgaaccacgacaacagcagtgacgtcaacgccaccgccgccaacgacaccagcctg
ctgggcctcaacgccaccttcaactggaccgagtacatcagcgatgagagtaattattat
tacctccctggccgcagggacgctctgctctgtggaaatggcagcggcgcggggctctgt
ccggagggctttgtgtgcatcaaagggggtcgtaatccggactatgactacacgagcttt
gacaccttcagttgggctttcttgtccctyttccgactcatgactcaggacttctgggag
aacctctaccagcagacgttgcgtgcggcggggaagccctacatggtcttctttgtgctg
gtgatattcctgggctccttttacctgatcaacctgatcctggctgtggtggccatggcg
tacgacgagcagaaccaggccaccatagaggaggctcagcagaaggaggaggagttccag
gccatgctggagcagctgaagaggcagcaggaggaagctcaggctgcagcggcagcagcg
gcggcggcggtagcaacggaggacggggagtacagcgggagagggggcctcacctctgag
tcctcctcggggacgtccaagctgagctcgaagagcgccaaggagcgacgaaaccggagg
aagaagaggaagcagcgcgaggaggaggaggagaggggcgtgcgcgacaagtttcgcaag
tctgagtccgaggacagcatcaagaggtccagcttccgcttctccatcgacgccaaccgg
ctgtcctacgagaaaagatgctcctcccccaaccagtctctcctcagcgttcgcgggacc
ctcttctcgcctcggaggaacagccgagccagcctcttcagcttccgtggccgtgcgcgc
gacatgggctcggagaacgacttcgccgacgacgagcacagcaccttcgaggagagcgac
agccgccgcggctccctgttcctgccgcggcgccttgagcgccgctgcagcgccgtcagc
cagaccagcctcggggtgcctcggatcgtgctgcccgccaacggcaagatgcactgctcc
gtggactgcaacggcgtggtgtcgctggtcggtgggacgtctgtaacaacctctcctgta
ggtctcctgctgccggagggaactacaacagatactgagataaagaagcgtcggtcgggt
ttcctccagccatccatggactacttagaagaaccaggggcccggcagagagccatgagc
gtggccagcatccttaccaacaccatggaagagcttgaagagtccagacagaagtgtccg
ccctgctggtataggttcgccaacacctgtttgatctgggactgttgtccagcctggctg
aaaatcaaagacgtggtcagcacggtggtcatggacccattcgtggacctgaccatcacc
atctgcatcgtcctcaacaccctgttcatggccatggagcactaccccatgaccagccag
tttgacaacgtcctctctgttggaaacctggtgttcactggtatattcacagcagagatg
tgcttcaagatcatagccctggatccatactactactttcaggagggctggaacatcttt
gatggcatcattgttagtctgagtctgatggagcttggcttggccaacgtagaaggcctg
tctgtgctcaggtccttcagattgctgagggtcttcaaactggccaagtcatggcccaca
ctcaacatgctgatcaagatcatcgggaactcggtcggtgccctgggcaacctgaccttg
gtgctggccatcattgtgttcatcttygccgtggtgggcatgcagctgttcggcaagagc
tacaaggagtgtgtgtgcaaaatttcggacgactgcgagctgccgcgctggcacatgcac
gacttcttccactcattcctcatcgtgttccgggtgctgtgcggagagtggattgagacc
atgtgggactgtatggaggtggcggggcagtccatgtgcatcatcgtcttcatgatggtc
atggtcatcggaaaccttgtggttctgaacctgttcctggctctcctcctgagctccttc
agcgccgacaatctggctgcgaccgacgacgacagcgagatgaacaacctgcagatcgct
gtgggccgcatccagcggggcatctcgtacgtcaagtccaaagtgcggcagttggtccga
agcctctgctttggcggcggtaagggctccggcctggccgaggagagcaaaccactggat
gagctacacagcaacgggaagggcaactgcatctccaaccacacaccgctggagatcacc
aaagacctcggtggtgtgtacaccatggagggcaatgggaggccaggaggagggctggtg
gtcggggtgggtggggacactgcgggccagtacccaatggaggagtgcgactacatgtca
tttattcacaaccccagcctgacggtgacagtgcccattgccgtgggcgagtcggacttc
gaaaacctgaacacggaggatttcagcagcgactcctctgacctggagggcagcaaagag
aagctcgatgttgacccacagcctctgagctcatcggaggggagcacagtcgatattcga
cccccggcagatggtgttgagtcagtggagctggagccagaggagtcactggatccagag
gcctgctttacagaaggctgcgtccgaaggttccagtgctgtcaggtcagcgaggacgtg
ggctggttcaaaagctggtggaccctccgaaaaacctgcttcatcatcgtggagcacaac
tggtttgagtccttcatcatattcatgatcctactcagcagtggagcactggcatttgag
gatatttacatcgagcagcggcgtaccattaaaaccgtgctggagtacgcagacaaggtg
ttcacttacatcttcattctggaaatgctgctgaagtgggtggcgtacggcttcgtcaag
tactttaccaacgcttggtgctggcttgacttccttatagtagatgtgtccttggtgagc
cttgtagccaacgctctgggctactctgagctcagcgcaatcaaaactttgaggacactg
cgagccctccggcccctgagggccctgtctcggtttgagggcatgagggtygtagtgaac
gcgctgctgggggccatcccctccatcatgaacgtgcttctggtttgcctcatcttctgg
ctcatcttcagcatcatgggcgtcaacctgttcgcagggaagtactaccactgcgtcaac
accaccactgacgagctcctgcctatcagcattgtcaacaacaagacagagtgcctgaac
ctgtataacagcacccgctggaagaacgtcaagatcaactttgacaatgttggggccggg
tacctagctctgctgcaagtggcaacatttaaaggttggatggacatcatgtacgcagct
gtggactccagaggtttggaggaccagcctgactatgaagtgaacctctacatgtacctc
tacttcgtcatcttcatcatctttgggtccttctttaccctcaacctctttatcggtgtc
atcatcgacaacttcaaccagcagaagaaaaagtttggaggtcaagacatcttcatgaca
gaagaacagaagaaatactacaatgccatgaagaagctgggttccaagaaaccacagaag
cctattcctcggccaacgaatgctttccaaggctttgtgtttgactgcatcacaaagcag
gcatttgacatcataattatgatcctcatctgccttaacatggtgactatgatggtggag
acggatgaccagacggaagacatggacaggatcctttactggatcaacctggtcttcatt
gtgctcttcaccggggagtgcgcactcaagatgatttctttgcgtcactattacttcact
attggttggaacatctttgactttgtggtggtgatcctttcgattgtaggtatgtttttg
tctgaggttatcgagaagtactttgtgtctccaacgctgttccgtgtgattcggcttgcc
cgtataggccgcatcctgcgactcatcaaaggtgccaaaggcattcggacgcttctcttt
gccttgatgatgtcgctccctgccctgttcaacataggcctcctgctcttcctggttatg
ttcatctacgccatcttcgccatgtccaactttgcttacgtcaaaagggagtccgggatc
gacgacatgtttaacttcgagactttcggtaacagcatgatctgcttatttcagatcacg
acctcggccgggtgggacggactgttggcgcccatcctgaacaagagggagcctgactgt
gacagtcaaatggagcacccggggaactcttacaagggcaactgtggcaacccatcggtg
ggcatcttcttcttcgtcagctacatcatcatctgctttctcattgtggtcaacatgtac
atcgctgtcatcctggagaacttcagcgtggccacagaggagagcgccgagccactgagt
gaggacgactttgagatgttctacgaagtgtgggagcgctttgatccagatgccacacag
ttcgtggagtacagcaagctctcagattttgcggatgctctggatccaccgttgcgcatg
cccaagcccaacatgacccaacttataaccatggacttgccaatggtgagcggcgaacgt
atccactgcctcgacatactatttgctttcaccaagcgggtgctgggcgaaggcggtgag
atggacatgttgcgcgggcagatggaggagcgcttcatggcgtccaacccctccaaggtg
tcctacgagcccatcaccaccaccctgcgccgcaagcaggaggaaacgtcggccattatt
atccagcgggccttccgcctctacatgatccgccaggccatgaagaaggcctccgccctc
tacaaggagcagctgaaggagggcgtccgtgacccggacaaagacgtgatggtcatcggc
aagttcaatgagaactcaacgtcagacaaaacggacatgaccccgtccaccgcttccccg
ccctcctacaacagtgtaaccaagtcggacaaggacaaatatgaaaaagaaaccagagaa
aaggaaaacaaagggaaagacttgaaagacaggaagaaatag
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