Alkalibacter rhizosphaerae: J0B03_11900
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Entry
J0B03_11900 CDS
T07100
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
alka
Alkalibacter rhizosphaerae
Pathway
alka03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
alka00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J0B03_11900 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alka03400
]
J0B03_11900 (xth)
Enzymes [BR:
alka01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
J0B03_11900 (xth)
DNA repair and recombination proteins [BR:
alka03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
J0B03_11900 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
QSX08470
UniProt:
A0A975AIF2
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All DBs
Position
complement(2397594..2398421)
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AA seq
275 aa
AA seq
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MKLISWNIDSLNAALTGDSARALLSKDVLKKITEHDPDVFAIQETKLPSNGPTKKHLEIL
KDQFQEYEIVWNSSVEPARKGYAGTMFLYKNHLKPSVAYPVIDAPDTMDFEGRIITLEFD
EFFLTQVYTPNAGDGLNRLKERQIWDIKYADYLAALDKNKCVVATGDFNVAHKEIDLAHP
ANNRNSAGFTDEERQGFTNLLNKGFTDTFRHLHGDITDTYTWWAQRVKTSKINNSGWRID
YWLVSDRIADKVIASEMIDSGPRQDHTPILLEINL
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgatatcatggaatatcgattctttaaacgcagcactaacaggtgattcagca
cgtgccttgttatctaaggatgtattaaaaaagattacagaacatgatcctgatgttttt
gctatacaggaaacaaagctaccaagcaacggacccactaaaaaacacttggaaatctta
aaagatcagtttcaggaatatgaaattgtttggaatagttctgtggaaccggcccgtaag
ggttatgccggcaccatgttcttatataagaatcatttgaaaccatccgttgcctatcca
gtgatcgatgctccggataccatggactttgaaggtcggatcattacattggagtttgat
gaattctttttgacccaagtttatacaccaaatgccggagatggattgaatcgcttgaaa
gaacgtcagatttgggatatcaaatatgcggattatcttgcagctctggataagaacaag
tgcgttgttgcgacaggtgattttaacgtggcccacaaagagatcgatttggcgcatcct
gccaataaccgaaattcagctggatttacggacgaagaacgtcaaggtttcacaaatctt
ttgaataaagggtttacggatacctttcgacatctgcatggtgacatcacagatacctat
acttggtgggctcagagagtgaaaactagtaaaatcaacaattctggctggagaatcgat
tattggctggtgagtgatcgcatagcagacaaggttattgcctctgaaatgatcgactca
ggtccgagacaagaccacacaccgattttgctagaaattaatctgtag
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