Aerococcus loyolae: CJ190_007715
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Entry
CJ190_007715 CDS
T09408
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
aloy
Aerococcus loyolae
Pathway
aloy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aloy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CJ190_007715 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aloy03021
]
CJ190_007715 (rpoB)
03400 DNA repair and recombination proteins [BR:
aloy03400
]
CJ190_007715 (rpoB)
Enzymes [BR:
aloy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CJ190_007715 (rpoB)
Transcription machinery [BR:
aloy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CJ190_007715 (rpoB)
DNA repair and recombination proteins [BR:
aloy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CJ190_007715 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
WIK92238
LinkDB
All DBs
Position
complement(1703442..1707038)
Genome browser
AA seq
1198 aa
AA seq
DB search
MAGHNVEYGKHRVRRSYSRINEVLELPNLIEIQTESYRWLLDKGIREMFNDISPIEDHGG
KLALEFVDYSFQEPKYDMSESRQQDTNYAAPMYVKLRLINNETGEIKDQEVFFGDFPLMT
DSGTFIINGSERVIVSQLVRSPGVYYNDKVDKNGKLSYGATVIPNRGAWLEMETDAKDIS
YVRIDRTRKLQMTVLMRALGFGSDDQIRELFGDSETLNLTLEKDVHKNPSDSRTEEALKD
IYERLRPGEPKTAESSRNLLNTRFFDPRRYDLAAVGRYKVNKKLDLKSRLYKQTLAENLV
DNETGEIVLEAGTVFTREVLDEISDKLDNGLGLVTVYPNDDAVITDPVDIQLIKIVAPKD
PDRVVHVIGNAMQNSDYKSLTVADVLTAMNYFLNLYEGLGTTDDIDHLGNRRIRSVGELL
QNQLRIGLSRMERVVRERMSIQDIDTVTPQQLINIRPVVASIREFFGSSQLSQFMDQNNP
LSELTHKRRLSALGPGGLTRDRAGYEVRDVHYSHYGRMCPIETPEGPNIGLINSLATYAK
INDFGFIETPYRRVDWTTHKVTDKIDYLTADEEDRFVIAQGNTPLNEDGSFATDTIMARK
IEENIEVSPEEVDYMDVSPKQVVSVATACIPFLENDDSNRALMGANMQRQAVPLLNPHAP
LVGTGMEYKAAHDSGAAVTCKRAGVVDYVDAREIRVRTEEGALDKYELVKFYRSNASSCY
NQTPLVHKGDQVDKDEILANGPSMEGGELALGQNPIIAFMTWDGYNYEDAVVLSERLVKE
DVYTSIHIDELESEARDTKLGPEEITREIPNVGEDALRNLDENGIIRIGAEVTDGDILVG
KVTPKGVTELSPEEHLLHAIFGEKAREVRDTSLRVPHGGGGIVNDVKVFHRENGDELKPG
VSMMVRVYIIQKRKIQVGDKMAGRHGNKGVVSIVLPEEDMPYLPDGTPVDICLNPLGVPS
RMNIGQVLELHLGMAARNLGIHVATPVFDGAQDEDIWETVKEAGMAEDAKTVLYDGRTGE
PFDNRVSVGVMYYLKLSHMVDDKLHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALE
AYGAAYTLQEILTYKSDDVVGRVQTYEAIVKGDPIPKPSVPESFRVLVKELQSLGLDIQV
LDENDKELDLRDEDPIQVARRDHKENQEQEDEDKDKNQEEKQNEGNDEEIIAKKQANE
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atggcaggacataatgttgaatacggcaaacaccgcgtacggcgttcttactcgcgcatc
aatgaagtgctcgagttgccaaatttgattgagattcaaaccgaatcttatcgttggtta
ttggataaggggattcgggaaatgtttaatgatatttcaccgattgaagaccacgggggc
aaattggccttggaattcgtggattattccttccaagaacccaaatatgacatgtctgaa
tcgcgtcaacaagacactaactatgcggcgccaatgtatgttaaattgcgtttaatcaat
aacgaaaccggtgagattaaggaccaagaagttttctttggggacttcccattgatgacc
gatagcgggactttcattattaacggttcagaacgggttattgtttcgcaattggtccgt
tcccctggggtttactacaatgataaagtagacaaaaatgggaaactctcttacggagcg
actgtgattcctaaccggggagcttggttagaaatggaaaccgacgccaaggatatttcc
tatgtgcggattgaccggacccgtaagctgcaaatgaccgttttgatgcgggccttaggt
tttggttcggatgaccaaattcgtgaactctttggtgacagtgaaactctgaatttaacc
ttagaaaaggatgtccacaaaaacccatcagactcacgaactgaagaagccttaaaagat
atttatgagcgtctccgtcctggtgaacctaaaacggcagaatcttcccgtaacttatta
aatacgcgtttcttcgacccacgtcgctatgacttggccgctgttggacgctacaaagtc
aataagaaattagatttaaaatctcgtctctataaacaaaccctagcggaaaacttagtc
gataatgaaactggtgaaattgtccttgaagctgggactgttttcacccgtgaagtctta
gatgaaattagcgataagttagataatggcctaggtttagtgacggtctatcctaatgat
gacgctgtgatcactgatccagtagatatccaactcattaagattgttgcacctaaggat
cctgaccgggtagtgcatgtgatcggtaatgcgatgcaaaattccgactacaagtcgcta
accgtagctgacgtgttaaccgccatgaactacttcttgaacctctatgaaggtttagga
acgaccgacgacatcgaccacttgggtaaccgtcggatccgttctgtgggtgaattgtta
caaaaccaattacggatcggtttaagccggatggaacgggtggtcagagagagaatgtct
atccaagacatcgatacggttaccccgcaacaattaattaatatccgtcctgtggtggca
tcgattcgtgaattctttgggtcatcccaattatcccaattcatggaccaaaacaaccca
ctctctgagttaactcacaaacgccgtctatctgctttgggacctggtggtttaacccgg
gaccgggccggttacgaagtgcgtgacgttcactattctcactatggccggatgtgtcca
attgaaacccctgaaggacctaacatcggtctgatcaacagcttggcgacctatgccaag
attaatgactttggtttcattgaaaccccatatcgccgggtagactggactacccacaag
gttaccgataagatcgattacctaacggcggatgaagaagaccgttttgttatcgctcaa
gggaacacgcctttaaatgaagatggttcttttgcgacagataccattatggcacgtaag
attgaggaaaatattgaagtttcccctgaagaagtcgactacatggacgtttcccctaaa
caggtggtttctgtcgcaaccgcatgtattcctttcttggaaaacgacgactccaaccgg
gccttgatgggggccaacatgcaacggcaagcggtgccactcttaaaccctcatgcgcct
ttggttgggactggtatggaatataaggcagcccatgactccggtgctgcagtaacctgt
aagcgggccggtgtggtggactatgtcgatgcccgtgaaatccgcgtacggacggaagaa
ggcgccttagataagtatgaattagtgaaattctaccggtctaatgccagctcctgctac
aaccaaaccccattggtacataaaggcgaccaagtggacaaggatgaaatcctagccaat
ggaccttccatggaaggtggggaattagcacttggacaaaacccaatcattgccttcatg
acctgggatggttataactatgaagacgcggttgtcctttctgaacgtttggttaaggaa
gacgtttatacctcgatccatattgatgaacttgaatccgaagctcgtgacaccaaatta
gggccagaagaaatcacccgggaaattcctaatgtgggtgaagatgccctccgtaatctc
gacgaaaacggaattatccgcatcggtgctgaagtaaccgatggcgatatcttagtgggt
aaggtcactcctaagggtgtgactgaactcagcccagaagaacacctgctccatgccatc
tttggtgaaaaggctcgtgaagttcgtgatacttccctacgagtacctcatggtggcggc
ggtatcgttaacgacgtcaaagtcttccaccgtgaaaacggcgacgaactcaaaccgggt
gtttccatgatggtgcgtgtctacattatccaaaaacggaagatccaagttggggataaa
atggctggtcgtcacggtaacaaaggggttgtctccattgtcctaccagaagaagacatg
ccttacctaccagacgggaccccagtagatatctgcttgaacccattaggggtgccttcg
cggatgaatatcgggcaggtcttagaactccacttagggatggctgcccgtaacttaggt
atccatgtggctacgcctgtttttgatggggcccaagatgaagacatttgggaaaccgtt
aaagaagccggtatggctgaagacgcgaagactgttctatatgacggtcggacgggggaa
ccatttgataaccgcgtttctgtaggggttatgtactacttgaaactctcccacatggtg
gatgataagctccatgcacgttccattgggccttactccctagttacccaacaaccatta
ggtggtaaagcacagtttgggggacaacgtttcggggaaatggaagtttgggcactggaa
gcatacggtgctgcttacaccctacaagaaatccttacctacaaatcagacgacgtggta
ggccgggtccaaacctatgaagcgatcgtgaaaggtgaccctattcctaaaccaagcgta
ccggaatctttccgcgtcctcgttaaagaattacaatccctaggtttagacatccaagtc
ctcgatgaaaacgataaggaacttgacttacgtgatgaagatcctatccaagttgcccgt
cgtgatcacaaagaaaaccaagaacaagaagatgaagacaaggataagaaccaagaagaa
aaacaaaacgaaggcaatgacgaagaaatcatcgccaaaaaacaagcaaatgaatag
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