Aspergillus luchuensis: AKAW2_10882A
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Entry
AKAW2_10882A CDS
T08060
Name
(RefSeq) uncharacterized protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
aluc
Aspergillus luchuensis
Pathway
aluc03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
aluc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
AKAW2_10882A
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aluc03400
]
AKAW2_10882A
Enzymes [BR:
aluc01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
AKAW2_10882A
DNA repair and recombination proteins [BR:
aluc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
AKAW2_10882A
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
Inv-AAD
Motif
Other DBs
NCBI-GeneID:
64955161
NCBI-ProteinID:
XP_041537602
UniProt:
A0A146FD01
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All DBs
Position
1:complement(join(2562860..2564870,2564925..2566075))
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AA seq
1053 aa
AA seq
DB search
MGFKFAHLCDLLSTLEDNRVLKAAHEAKVVNPDIRAVSRWFAQNEKRIRDKDTDQLALLS
CMFPEKRTDRVYWLQDTSLAKIIARCLLLGCSRRQELERWRVSGGVDLGQCVENVMRQAE
NHVTNGQDVTVEEIDKALAEIASRCRFSGPRVRRQRTAVKVDQTLSPLYRRLSSRDAKWL
TRMILKSYSPVSLPVNIILKRFHFLLPHLLLFQDSFERALSVLGSSPIKHFPPQPNAALA
KDLGIIALGHLSPAVGVKIGRPEYYKARSIKHCCRMIGNRRMSIERKYDGEYCQIHIDLS
KDSDWIQIFSKSGKDSTGDRAGIHQVISESLKLRRPGCKISQRCILEGELLVWSDKHGSI
ADFHKLRKFISRSGTFIGTQSDSPPQPYEHLMIVFFDILLMDDNVCLRLPHRERRLLLKD
TIEPIPGRAGISEQWVVDFSHHGGQSRLESIFNKGITERWEGFVLKASEDPYFTIFSDDK
DNPSFGRWIKLKKDYIPGLGDTVDLAIIGARYNSRDAMAIKQVKNLSWTEFFIGCLVNKE
MVVQSGAIPKFRVLDVINHHCMHVRFMQSLNQFGGFCARSPDSDHGFILEYGESVVNPMD
VVFKTPFVVEMLGSGFEKPSGARYYTLRFPRILKVLSDRSFEDAASYRELQLLAETARSA
LDEDPGNHEYEAAKRMKLRDRSECTPDRSQSLQTTQSPFLQSSTTAEDDSGPGAFVSPSN
NALNAPDALLGSARQTKRRRESSAMQRTIPIHVDLNRAPSPPTAQSVRGKYLTDNANLSS
HAAGQRKNSTQTTGSSDAEKAFRPSQMPGPSSGLDKLQKHSESLHKLIDRQMESNVTLET
CSKRPSGNETVAPHLCQKATQRILSPLLHSSIYVHHDISSDDMVVSQPIPNAWKIAPSLN
EFVRKLTRPDTQCRPRTSNHHAVPHGTAYGLVMIPGKSDALCTVLPDLIRAIANSFQSYH
INSHQGGKVMILDSSFLKFNISSNDTRFCLHQTLERISKAFFYACVSWTFDGPPGHDSSE
DQARECDALYTRPKITVSFDRREVGLLGEKQSY
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atggggttcaaatttgctcacctgtgcgacttactatcaacgcttgaagataacagggtc
ctgaaagctgcccatgaagccaaagttgtgaaccccgacatccgtgccgtatcacgatgg
ttcgctcagaatgaaaagaggatccgcgataaagataccgaccagttggctctcctttcc
tgcatgtttccagagaaacggacagaccgtgtctactggctacaggatacatcgctggcc
aaaatcatagcacggtgcctgcttctgggctgttcacggcggcaggagctcgagcgttgg
cgtgtatccggaggcgtagacctgggacaatgcgtggagaatgtcatgcggcaggctgaa
aaccatgtcaccaacggccaagatgtcactgtggaagagatagacaaagctttagctgaa
atcgcctctcgttgcaggttttctggtcctcgggtgcgaagacagcgtacggctgtcaag
gtcgatcagacgttgtcccctctataccgacggctaagtagcagagatgcgaaatggctt
actcgaatgatactgaaaagctattctcctgtttccttgccggtaaacatcattttgaag
cggttccatttcctccttccgcatttacttctctttcaggactccttcgaacgcgcttta
agcgtgctaggctctagtcccattaaacactttccacctcaaccaaatgctgcattagcc
aaagacctgggaatcatcgcgttagggcatctcagtcctgctgtgggagtcaagataggg
cgacccgagtactataaggctaggagcatcaaacattgctgtcgcatgatcggcaaccgt
cgcatgagcatcgaaaggaagtatgatggtgaatattgccagatacatatcgacctgtcc
aaggactcggactggatccaaatattttctaaaagcggtaaagattcaacaggagaccgc
gccggtatccatcaagtcattagcgaatcactgaagctaagacggccgggttgcaagatt
tcccaacgatgcatcctggagggcgaattgcttgtttggagcgacaaacatggcagcatc
gctgattttcataagttgcgtaaattcatatcgcgttcaggcactttcattggaacccaa
agtgactctcctccacaaccttatgagcatctgatgatagtattttttgacatcctgctt
atggatgacaatgtttgtctgaggcttccacaccgtgagcggagattgcttctgaaagac
actatagagccaatcccagggcgtgcgggtatatctgagcagtgggttgttgacttttcc
catcatggcggccaatcccgactagaaagtatcttcaacaaaggcatcactgagcgatgg
gaagggtttgtcctcaaagcaagtgaagacccttactttacaatcttttctgatgacaag
gacaatccgtccttcggtcgctggatcaagttgaagaaagactatatacctggactaggt
gacaccgtcgatctcgcaattattggcgcgaggtacaactctcgggatgctatggcaatc
aagcaagtcaaaaatctctcatggactgagttcttcattgggtgcctcgtcaataaagag
atggttgtgcaatctggggccatacccaaatttcgtgtcctcgatgttatcaaccaccac
tgcatgcatgtcaggttcatgcagtccttaaatcagttcggcgggttctgcgcccgcagt
ccagactccgaccatggattcatccttgaatatggggagagtgtagtcaaccccatggat
gtcgtcttcaagacaccctttgtcgtagagatgctaggcagtggctttgaaaagccgtct
ggcgccagatactatacactgcgtttccctaggatcttgaaggtcctttctgatcgatca
tttgaggatgctgcgtcatacagagagttgcagctattagcagaaactgctcggtctgcc
cttgatgaggatccaggaaatcacgagtatgaagcagccaaacggatgaagctacgagat
cgctcggagtgcacaccggatcgatcacaaagtcttcagacaacacagagcccctttctc
cagtcctcgactactgctgaagacgactcaggtcctggggcatttgtgtctccctcgaac
aatgcattgaacgccccagacgcgttacttggttccgcgagacaaaccaaacgacgccgc
gaaagcagcgctatgcaacgtaccatccccatccatgtggatctcaatagagccccatcc
ccacctacagcacagagtgtacgcggcaagtatctgacagataatgccaatctatcttct
catgcagccggacagaggaagaactcaacccagacaaccgggtcctctgatgcagagaaa
gccttccgccccagtcaaatgcctggtccttcgagtggcttagacaagttgcaaaagcac
tctgaatcccttcataaactaatagaccgccaaatggagtccaatgtgacgctggaaact
tgcagcaaacgcccatccggcaatgaaaccgtggctccccacctctgccagaaagcaact
cagcgtattctatcaccactgctccacagttctatatacgttcaccatgacatctcctcc
gatgacatggtagtatctcaacccataccaaacgcttggaaaatagcaccaagcctcaat
gagttcgtccgaaaattaacacgcccagatacacaatgccgccccaggacatctaaccat
cacgcagtcccgcatggcacagcatacggactggtcatgatacctggcaagagcgatgcg
ctgtgtacagttctccctgatctaatcagagccatagcaaatagctttcaatcttaccac
atcaacagccaccagggcgggaaagtcatgatcctcgactcgagctttctcaaattcaac
atcagcagtaatgatacgagattttgccttcatcagacattggaacgcatcagcaaggcg
ttcttctatgcttgtgtgagctggacgtttgatggacctccaggtcacgactcatctgaa
gaccaagctagagaatgcgatgcgctttacactaggcctaaaatcacggtcagcttcgat
agacgtgaggtgggtcttctgggagaaaagcagtcttactga
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