Arabidopsis lyrata (lyrate rockcress): 110224835
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Entry
110224835 CDS
T01578
Name
(RefSeq) structural maintenance of chromosomes protein 4
KO
K06675
structural maintenance of chromosome 4
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aly03036
]
110224835
Chromosome and associated proteins [BR:
aly03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
110224835
Condensin II
110224835
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_29
AAA_23
AAA_15
Nuf2_DHR10-like
ADIP
Ubiq_cyt_C_chap
ABC_tran
Motif
Other DBs
NCBI-GeneID:
110224835
NCBI-ProteinID:
XP_020867911
LinkDB
All DBs
Position
Unknown
AA seq
1244 aa
AA seq
DB search
MEEDEPIRGGESEPDQRKSGTPRLYIKELVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSG
KSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLDSAGVSVQFEEIIDLDNGLYETV
PGSDFMITRVAFRDNSSKYYINERSSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLM
KPKAQGPHDEGFLEYLEDIIGTNKYVEKIDELNKQLETLNESRSGVVQMVKLAEKERDNL
EGVKDEAETYMLKELSHLKWQEKATKMAYEDTVAKITEQRESLQNLENSLNDERVKMDES
NKELKEFESVHEKHKKRQEVLDNELRVCKEKFKEFERQDVKHREDLKHVKQKIKKLEDKL
EKDSSKIGDMTKESGDSRNLIPKLQENIPKLQKFLLDEEKELEGIKEIAKVETEGYRSEL
SKIRGELEPWEKDLIVHRGKLDVASSESELLSKKHEAALKAFTDAQKQLCDLSTRKEERA
AATTSRKADIEKKKQEAIEARKVEEESIKEQERLVPQEQAAREKVAELKSAMNSEKSQGD
VLKAVLRAKEDNQIEGIYGRMGDLGAIDAKYDVAISTACAGLDYIVVETTSAAQACVELL
RKGNLGVATFMILEKQTDHIHKLKEKVKTPEDVPRLFDLIRVKDERMKLAFYAALGNTVV
AKDLDQATRIAYGGNREFRRVVTLDGALFEKSGTMSGGGGKPRGGRMGTSIRATGVSGEA
VANAENELSKIVDMLNNIREKIGNAVRKYRAAENEVSRLEMELAKSQREIESLNSEHNYL
EKQLASLEAASQPKTDEIDRLKELKKIISKEEKEIENLEKGSKQLKDKALELQTNIENAG
GEKLKGQKAKVEKIQNDIDKNDTEINRCNVQIETNQKLIKKLTKGIEEATREKERLEGEK
ENLHVTFKNITQKAFEIQETYKKTQKLIDEHKDLLTGAKSDFENLKKSVDELKASRVDAE
FKVQDMKKKYNELEMREKGYKKKLNDLQFAFTKHMEQIQKDLVDPDKLQATLMDNNLNEA
CDLKRALEMVALLEAQLKELNPNLDSIAEYRSKVELYNGRVDELNSVTQERDDTRKQYDE
LRKRRLDEFMAGFNTISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWK
NIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQF
IIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFAVCQKTPA
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagatgagccaattcgcggcggcgagtctgagcccgaccagaggaaatctgga
actccgagactttacattaaagagcttgtgatgcgaaacttcaaatcatatgctggtgaa
caacgcgtcggtcctttccacaagagtttttctgcggtggttggacctaatgggagtgga
aagagcaatgtcatagatgctatgctctttgtatttgggaaacgagcgaagcagatgcgg
ctcaacaaagtttcagagctaattcacaactcaactaatcaccagaacttggatagtgct
ggagtttctgtacagtttgaagagattatcgatttggataatggattgtacgaaactgtt
cctggaagcgatttcatgattactcgggttgcattccgagataattcgtccaagtattat
atcaatgaaaggtcgagcaatttcactgaagttaccaaaaaactcaaggggaaaggagta
gatcttgacaacaaccgtttcttgattcttcagggggaggtagaacagatatcactcatg
aagccgaaagcacaaggtccccacgatgaaggttttcttgaatacctcgaggatatcatt
ggaacgaataaatatgttgagaagatagatgaattaaataagcagcttgaaaccctcaat
gaaagccggtctggagttgtgcaaatggtgaaattagcagagaaagaaagagacaactta
gagggtgtgaaggacgaggcagagacttacatgctgaaagagttatcacatcttaaatgg
caagaaaaggctacaaaaatggcatatgaagatactgtagctaaaattactgaacagaga
gaaagcttgcagaatttggaaaatagtctaaacgatgagcgagtgaaaatggatgagagt
aataaagagttaaaagaatttgagtctgtgcatgaaaaacataagaagagacaagaggtt
cttgataatgaacttagagtctgtaaggagaaattcaaagagtttgaaaggcaggacgta
aagcatagggaggacttgaagcatgtgaagcaaaaaatcaagaaactcgaggataaactt
gagaaggattcatccaaaatcggtgatatgacaaaggagtctggggactcgaggaatcta
atacctaaacttcaggaaaacataccaaagcttcagaagttcttgctagatgaggagaag
gaattggagggaatcaaagagatagctaaagttgaaactgaaggttaccggtctgagctt
tcaaaaattcgtggtgaactagaaccttgggaaaaagatctaattgtgcacaggggaaag
cttgatgttgcatcatctgaaagtgaactcttgagcaagaagcatgaagctgctctgaaa
gccttcacagatgctcagaaacagctctgtgatttatcaacgagaaaagaagaaagagct
gcagcaactacctctaggaaagctgatatagagaagaagaaacaagaagcaatcgaagct
cggaaagtggaagaggaatcaattaaagaacaagaaagactcgttccacaagaacaggcg
gccagagaaaaagttgctgagctcaaatcagcaatgaattctgagaagagtcagggtgat
gttttgaaggcagttttaagagcgaaggaggacaatcaaattgaaggaatatatggaagg
atgggggacttaggtgccattgatgcaaaatacgatgtggccatatcaactgcttgcgct
ggccttgattacattgttgtggaaacaacttctgcagcacaagcatgtgttgagctgctg
cggaagggaaatcttggcgttgcaacatttatgatattggaaaaacaaacagatcatata
cataaactgaaggagaaagtgaaaacacctgaggatgtaccacgcctctttgatctgatc
agggttaaggatgaaaggatgaaacttgcattctatgcagccttgggaaacactgttgtg
gcaaaggatcttgatcaggcaacacgtattgcatatggtgggaacagagaatttcgaaga
gtcgtgactcttgatggcgctctttttgaaaaatctggtaccatgagtggagggggaggt
aagccacgtgggggaagaatgggaacctctattcgtgccactggtgtgtctggcgaagct
gttgctaatgctgaaaatgagctctccaaaattgttgacatgttaaacaacatccgtgaa
aagattggcaatgctgtgagaaaatatcgggctgcagaaaacgaagtctctcgcctggag
atggaactggcgaaaagccaaagagagattgaaagtctcaattcagagcataattatctg
gaaaaacaactagcttccttggaagctgcatctcaaccaaagacggatgagattgacagg
cttaaagagctcaagaaaataatctccaaagaagaaaaagagattgaaaaccttgagaag
ggttctaaacagctgaaggataaagctttggagctacaaaccaacatagagaacgcaggt
ggtgaaaaattaaaaggacaaaaggcaaaggttgagaagattcagaatgatatcgacaaa
aacgatacagagatcaatcggtgtaatgttcaaatagaaacaaaccagaaactgataaag
aagttgacaaaggggattgaagaggctactcgagaaaaagagaggctagagggtgagaag
gaaaatttgcatgtgactttcaaaaatataacgcagaaagcatttgagatccaagagacg
tataagaaaacacagaagttgattgatgagcacaaagacttgttgactggagcaaagtcc
gattttgagaacctgaaaaagtctgtggatgagttgaaggcatctagggtagatgcagaa
ttcaaagtccaagatatgaaaaagaaatacaatgaattagaaatgagagagaagggctac
aagaagaaactcaacgacttgcagtttgcattcacaaagcatatggaacaaattcagaaa
gatcttgttgatccggataagcttcaagcaacattgatggataataatttgaatgaagct
tgtgatctgaaaagggctcttgaaatggttgccttactggaggctcagctaaaagagttg
aatccaaatcttgactcaatcgccgagtaccggagcaaagtggaactttacaacggacgg
gtagacgaacttaactctgtgacccaagagcgtgatgacacaaggaagcagtatgatgaa
ttgagaaagagaaggttggatgagtttatggcaggatttaacactatatccttaaagctg
aaagaaatgtatcagatgatcactcttggaggtgatgcagagctggagctggtagactcg
cttgaccctttctcagaaggtgtggtattcagtgtaagacctcccaaaaaaagctggaag
aacattgcaaacttgtcgggtggtgaaaagacacttagctcactcgcactagtctttgca
ctccatcactacaagcctactccactttacgtcatggacgaaatcgacgctgctctcgac
ttcaaaaacgtatcaatcgttggacattacgtgaaagaccgtactaaagatgctcagttc
attatcatcagtttgaggaacaacatgtttgagctagcagatagattggtgggaatctac
aaaacagataactgtacgaagagcattacgatcaatcctggaagttttgcagtttgtcag
aaaactcctgcttag
DBGET
integrated database retrieval system
