Arabidopsis lyrata (lyrate rockcress): 9300305
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Entry
9300305 CDS
T01578
Name
(RefSeq) transcription factor SPEECHLESS
KO
K20558
transcription factor SPEECHLESS
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
9300305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aly03000
]
9300305
Transcription factors [BR:
aly03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
9300305
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
CDC45
RPT
Motif
Other DBs
NCBI-GeneID:
9300305
NCBI-ProteinID:
XP_002865959
UniProt:
D7MSV6
LinkDB
All DBs
Position
Unknown
AA seq
366 aa
AA seq
DB search
MQEIIPDFLEECEFVDTSLAGDDLFAILESLEGAGEISPTAASTPKDGTTSSKELVKDQD
YENSSPKRKKQRLETRKEEDEEEEDGDGEGEGEEENKQDGQHKMSHVTVERNRRKQMNEH
LTVLRSLMPCFYVKRGDQASIIGGVVEYISELQQVLQSLEAKKQRKTYAEVLSPRLVPSP
RPSPPVLSPRKPPLSPRINHHQIHHHLLLPPISPRTPQPTSPYRAIPPQLPLIPQPPLRS
YSSLASCSSLGDPPPYSPASTSSSPSVSSNHESSVINELVANSKSALADVEVKFSGANVL
LKTVSHKIPGQVMKIIAALENLALEILQVNINTVDETMLNSFTIKIGIECQLSAEELAQQ
IQQTFC
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagataatacctgattttcttgaagagtgtgaattcgtcgacacttcactagcc
ggagatgatttatttgccatcttagaaagtcttgaaggcgccggagagatatctccgact
gctgcatctacacccaaagatggaaccacaagttccaaggagttagttaaggatcaagat
tatgaaaactcatctcctaagaggaagaagcaaagactagaaaccaggaaagaagaggac
gaagaagaagaagacggagatggagaaggagaaggtgaagaagagaataagcaagatggg
caacacaaaatgtctcatgtaaccgtggaacgtaaccggagaaagcaaatgaacgagcac
ttaactgttttacgttctcttatgccttgtttctacgtcaaacggggggaccaagcatcg
atcataggaggagttgtggagtacataagcgagttacaacaagttcttcagtctttagaa
gccaagaaacaacgtaaaacctatgccgaagtcctaagcccgagacttgtcccgagccct
cggccttcaccgcctgttctaagcccgagaaaaccacctcttagcccgcgtatcaaccac
caccagatccaccaccacctccttctccctcctataagtcctcgaacacctcagcccaca
agcccataccgggccattccaccgcaactaccactcatcccacagcctccgcttcgctct
tacagctcattggcaagttgcagcagcttaggagacccacctccatactctcctgcttca
acttcttcatctccttcagttagtagtaaccatgaaagtagtgtgatcaatgagcttgtt
gctaactcaaaatcggctttggctgatgtggaagtgaagttctcaggagctaacgtgctg
ctcaaaacggtgtcgcataagatcccgggacaagttatgaagataattgctgctcttgaa
aatttggctcttgagattcttcaggttaatattaacaccgtcgacgaaaccatgcttaat
tctttcaccatcaagattggaattgagtgccaactaagtgcagaagaactggctcaacaa
attcagcaaacattctgctaa
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