Arabidopsis lyrata (lyrate rockcress): 9301481
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Entry
9301481 CDS
T01578
Name
(RefSeq) protein transport protein sec23-1
KO
K14006
protein transport protein SEC23
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
9301481
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aly04131
]
9301481
Membrane trafficking [BR:
aly04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
9301481
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Zn_ribbon_10
Motif
Other DBs
NCBI-GeneID:
9301481
NCBI-ProteinID:
XP_020871030
LinkDB
All DBs
Position
Unknown
AA seq
793 aa
AA seq
DB search
MDFLELEAIEGLRWSWNSWPTTKSDCESLVVPLSIMYTPLMQFSELPTIPYDPLICSRCG
AVLNPYARVDYQSRIWSCPFCFHKNLFPRSYSGITETNLPAELFPTYSAVEYSPPLPRKS
GSATTTPTAGGSWSNGFNQGLRSMSSNSSFSSLASSVGGGGGVISELGPAFVFVVDASMV
EDELRAVRSELLFVIEQLPENCLVALITFDSMVRVYDLGFSDCSKVVVFHGERDLSPDQI
QQFLGLGYLKQLHHGKMSGIRKQSFLLPLVECEFNLTCAFEEIVPLVDVKPGHRPHRSTG
AAISTALGLLEGCSVTTGSRIMVFTSGLTTRGPGIIVDSDLSNSIRTHRDIITGQVSYYD
KSCGFYKKLAKRLCDTSAALDVFACSLDQVGAAEMRYAVEMSGGFLLLGETFESEQFKKC
LRHIFIRDADGNLSMYFDVSLEVVTTKDMRICGALGPVVSLRQKNDIVSETEIGEGGTYM
WKTSTVTNKTCVSFLFHVSNEQNRKPQPGSAFFIQFITRYRYGNGGMRKRVTTVARRWVA
GKSPEISSGFDQETAASVMARLAINRAEECYARDVIRWLDDGLIRFASRFGDYIQEDPSS
FRLTPNFSLYPQFMFYLRRSQFLDVFNNSPDETGFFRLMLNREGVVNSIIMIQPTLLRYS
FDGPPVPVLLDIRSVTADVILLFDSYFYVVIHHGSKIAQWRKLEYHKDPSHETFRNLLEA
PEIDAAQLVTDRIPMPRIVRCDQHGSQARFLLAKLNPSVTQKTDHTGGSDIVLTDDLSLQ
DFLEDLQSLAVKG
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggatttcttagagctagaagcgatcgaaggattaagatggtcatggaactcatggcca
actacaaaatccgattgcgaatctctcgttgttccattaagtatcatgtatactccattg
atgcaattctctgagcttccaacgattccttatgatccattgatttgttctcgttgtgga
gctgtgttaaacccttacgctcgtgttgattatcaatctcgaatctggtcttgtcccttt
tgctttcacaaaaaccttttccctcgttcttactctggaatcactgaaactaatctcccg
gcggagctttttccgacttatagcgctgttgaatactctccgccgctgccgcgtaagtcg
ggttcagcgacgacgactccgactgctggtgggagttggagtaatgggtttaatcaaggg
cttagatcaatgtcttcgaattcgtcattttcgtctcttgcttcttctgttggaggtggt
ggtggtgtgattagtgagcttggacctgcgtttgtgtttgttgttgatgcgtctatggtg
gaggatgagttaagagctgtgagaagtgagcttttgtttgtgattgagcagttgcctgag
aattgtttggtggctttgattacttttgattctatggttagggtttatgatttgggtttc
tctgattgctctaaagttgttgtttttcatggtgagcgtgatctttctccagaccagata
caacaatttctgggacttggatatttgaagcagcttcatcatggaaagatgtcagggatt
cggaagcaaagtttcttgcttccgttggtggaatgtgagtttaacttaacatgtgcgttt
gaagaaattgttcccttggttgatgtcaaaccgggtcatcggcctcataggtcaaccggt
gctgcgatctcaacagcattgggactgctcgagggatgttctgtaaccacgggttctcgg
attatggttttcacatcggggcttactacaagaggccctgggatcattgtggactctgat
ttaagtaattcgatcagaactcacagagatattatcactggtcaggtgtcttattacgat
aaatcttgcgggttttacaagaaactagcaaaaaggctatgcgatacgtctgctgctcta
gatgtgttcgcttgctctcttgaccaagttggagcagcggaaatgagatatgcagtggaa
atgtctggtggatttctcttactgggagaaacatttgagtccgagcaattcaaaaaatgt
ctcagacatatattcatccgcgatgcagatgggaacctgagtatgtactttgatgtgtct
ttagaagttgtgacgactaaggatatgagaatctgcggtgcactcggtccagttgtgtcg
ctaagacagaagaacgatatagtgagcgaaacagagattggtgaaggcggaacatatatg
tggaaaacgagcactgtcacgaataagacatgtgtgtcattcttgtttcatgtgagcaac
gaacagaatcgaaaaccgcagcctggttccgcgttcttcattcagttcattactcggtat
cggtatggaaatggaggaatgaggaaacgggttacaactgttgctagaagatgggttgct
ggaaaatcgccagaaatctcgtcaggttttgatcaagaaacagctgcttcagttatggcg
cggcttgcaattaaccgagcagaggagtgttacgcaagagacgttattaggtggttagat
gatggtttaatccgctttgcttcacggtttggagattatattcaagaagatccatcttct
ttcaggttgactccaaacttctccctttatcctcagttcatgttctatctacgaagatca
cagtttcttgacgtcttcaacaattccccggatgaaaccggttttttccggttaatgtta
aaccgggaaggagtggtaaactcaatcatcatgattcaaccaacgcttctccggtattca
ttcgacggaccgccagttccagtcctcctcgatatccggtcagtgactgcagacgtgatt
ttgctattcgattcatacttctacgtggttatccaccatggatcaaaaatcgcccaatgg
aggaaactcgagtatcataaagacccgagccacgagactttccggaaccttctggaagca
cccgaaatcgatgcggcgcagttagtgactgataggattccaatgccacggattgtacgg
tgtgaccagcacggtagtcaagctcggtttcttcttgccaagctcaatccttcggtaact
cagaaaacagatcataccggtggttcagatattgttctcactgatgatttgagtcttcaa
gatttcctagaagatttgcaatctctggcagtaaaaggctga
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integrated database retrieval system
