Arabidopsis lyrata (lyrate rockcress): 9302110
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Entry
9302110 CDS
T01578
Name
(RefSeq) double-strand break repair protein MRE11 isoform X1
KO
K10865
double-strand break repair protein MRE11
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03440
Homologous recombination
aly03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
9302110
03450 Non-homologous end-joining
9302110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aly03032
]
9302110
03400 DNA repair and recombination proteins [BR:
aly03400
]
9302110
DNA replication proteins [BR:
aly03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
9302110
DNA repair and recombination proteins [BR:
aly03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
9302110
BRCA1-C complex
9302110
NHEJ (non-homologous end-joining)
MRX complex
9302110
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
Motif
Other DBs
NCBI-GeneID:
9302110
NCBI-ProteinID:
XP_020870625
LinkDB
All DBs
Position
Unknown
AA seq
721 aa
AA seq
DB search
MLDREDFSDTLRVLVATDCHLGYMEKDEIRRHDSFKAFEEICSIAEEKQVDFLLLGGDLF
HENKPSRTTLVKAIEILRRHCLNDKPVQFQVVSDQTVNFQNAFGHVNYEDPHFNVGLPVF
SIHGNHDDPAGVDNLSAIDILSACNLVNYFGKMVLGGSGVGQISLYPILMKKGSTTVALY
GLGNIRDERLNRMFQTPHAVQWMRPEVQEGCDVSDWFNILVLHQNRVKSNPKNAISEHFL
PRFLDFIVWGHEHECLIDPQEVSGMGFHITQPGSSVATSLIDGESKPKHVLLLEIKGNQY
RPTKIPLTSVRPFEYTEIVLKDEGDIDPNDQNSILEHLDKVVRNLIEKASKNAVNRSEIK
LPLVRIKVDYSGFMTINPQRFGQKYVGKVANPQDILIFSKASKKGRSEANIDDSERLRPE
ELNQQNIEALVAESNLKMEILPVNDLDVALHNFVNKDDKLAFYSCVQYNLQETRGKLAKD
SVAQKFEEDDLILKVGECLEERLKHRSTRPTDSSQFLSTGLTSENLTKRSSGIADASFSD
DEDTTQMSGLVPATRGRRGSSTANTSRGRAKAPTRGRGRGKASSAMKQTTLDGSLGFRQS
QRSASAAASASFKNASTIGEDDVDSPSSEEAEPEDFTKLDSTSEDDESTKGKGRKRPATT
KRGRGRGSGTSKRGRKTESSSSLHRLLSSKDDDDDEDDEDIEKKLNKSQPRVTRNYGALR
R
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgcttgacagggaggattttagtgatacacttcgagtacttgttgcaactgattgccac
ttgggttacatggagaaggatgaaataaggcggcatgattcgtttaaggcttttgaagag
atatgttctatagcggaggagaaacaggtggacttcttactccttggaggtgatcttttt
catgagaataaaccctctagaactacgctagttaaagccattgaaattcttcgccgccac
tgtcttaatgataaaccagtgcagtttcaagtagtcagcgaccagactgtaaattttcaa
aatgcgtttggtcatgtaaattacgaggatccacacttcaatgtaggcttgcccgtgttc
agtattcatggaaaccatgatgatccagccggagtggacaacctttctgcaattgatatt
ctttccgcatgcaaccttgtgaactattttggaaagatggttcttggtggttcaggtgtt
ggccagatttccctctaccctatacttatgaagaagggttcaacaactgtggctctctat
ggtttaggaaacatcagggatgaacgtcttaatagaatgtttcagaccccacatgctgtc
caatggatgaggcctgaagttcaagaaggatgtgatgtttctgactggttcaacattctg
gtgcttcatcaaaatagggtgaaatcaaaccccaaaaatgcaataagtgagcactttctt
ccacggttccttgacttcattgtgtggggccatgagcatgaatgccttatcgacccccag
gaggtatccggaatgggcttccacatcacacaaccaggatcttctgtggcaacatcactt
attgatggggaatcaaagccaaaacatgttcttctcttagaaatcaagggaaatcaatat
cgtcctacgaagatacctctgacatctgtgaggcctttcgagtatacagagattgtttta
aaggatgaaggtgatattgatcccaatgatcaaaactcaattctcgagcacttggataaa
gtggtcagaaatctaatagagaaagccagcaaaaatgctgttaacagatcagagatcaag
ctcccgttggttcgaatcaaggtagattactcaggatttatgacgataaatcctcaaagg
tttggacagaaatatgtgggaaaggttgcaaatccccaggacattttaatattttccaag
gcttctaagaaaggtcggagcgaagccaacatcgatgattctgagcggcttcgtccagaa
gaactgaaccagcagaatatagaagctttagtagctgaaagcaacctgaaaatggagatc
ctgccagttaacgatctggatgttgctcttcacaattttgtgaacaaggatgataaacta
gctttctactcatgcgttcagtacaatcttcaagagactcgtggtaaacttgcaaaggat
tcagttgcccagaaatttgaggaagatgacttgattcttaaagtgggagagtgcttagag
gaacgtttgaaacataggtccactcgacccactgattcctcgcagtttttatccacagga
ttgacatcagagaatttgacgaaaagaagcagtggcatcgcggatgcttcgttcagtgat
gatgaagacacgactcagatgtctggtttagtgcctgccactagaggacggagaggttca
tccactgctaatacatctcgtggtagagctaaagccccaaccagaggaagaggccgtggt
aaggcctcaagtgcgatgaagcaaaccactcttgatggttctcttggttttcgccagtct
caaagatctgcttcagctgctgcttcagcttccttcaaaaatgcttccaccattggtgaa
gatgatgtagattctccttcaagcgaggaagcagagcctgaagattttaccaaacttgac
agcacttcggaggacgatgagagcactaaaggcaaaggacgtaaaagaccagctactact
aagagaggcagaggtagaggttctgggacttcaaaacgtggtagaaaaaccgaaagctct
tcttcacttcataggctactcagtagcaaagacgatgacgatgacgaagatgatgaagac
atagaaaagaagcttaacaaatctcagcctcgggttacaaggaactatggagctctaagg
agataa
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