Arabidopsis lyrata (lyrate rockcress): 9304335
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Entry
9304335 CDS
T01578
Name
(RefSeq) LOW QUALITY PROTEIN: putative chaperone protein ClpB2, chloroplastic
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
aly03110
]
9304335
Chaperones and folding catalysts [BR:
aly03110
]
Heat shock proteins
HSP100
9304335
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
AAA_16
AAA_22
AAA_7
Sigma54_activat
Clp_N
AAA_14
nSTAND3
IstB_IS21
bpMoxR
ATPase_2
AAA_28
AAA_18
RuvB_N
Mg_chelatase
NACHT
TsaE
AAA_19
DNA_pol3_delta2
NBD_SMAX1
DAM-like-phage1
ResIII
Spectrin_Anc-1
Torsin
Motif
Other DBs
NCBI-GeneID:
9304335
NCBI-ProteinID:
XP_020874647
LinkDB
All DBs
Position
Unknown
AA seq
932 aa
AA seq
DB search
MNYTRFDPKVQLILAKARTLAIVSSHVQVTPLHLGVGLISDKTGVFYRAITTAGGSELLA
QSAVKVIKQALKKLPKQVPPPTGAIPRYPSRKNLPKQTPPISNGAIPQYPGLNIPQNPIP
FLTRTIPQNNASLVMVLNRAQTKPGETSVGVEALVISLLDDSQIRDLLKEAGSVPEKVKS
EVEKLGGEVNLQALKTYGIDLVEQVGKLDPVIGRDKEIRRVVGILSRRTKNNPVLIGEPG
VGKTAVVEGLAQRILKGDVPINLTDVKLFSLDLGAMVAGTTLRGQFEERLKSVLKEVENA
QGKVVLFIDEIHMALGAGKASGSTDAANLLKPMLARGQLRCIGATTLEEYRTHIEKDAAF
ERRFQQVYVAEPSVPDTISILRGLKEKYEGHHGVRIQDSALVVSAQLSARYITARRLPDK
AIDLVDESCAHVRVQLDSQPEEIDYLERKTMQLKIEIHALEKEKDDKASEARLVEVRKEL
DDLRDKLEPLTIKYKNEKRIINETRSLKQKRDELMIALQEAERQYDLPKAADLRYGAIQE
VESAIAKLEKSVKDNVMLTETVGPENIAEVVSRWTGIPVTALDQNEKKRLISLADRLHER
VVGQDEAVKAVAAAILRSRVGLGRPQQPSGSFLFLGPTGVGKTELAKALAEQLFYDENLL
VRLDMSEYMDRSTVNKLIGAPPGYIGHEEGGQLTEPVRRRPYCVVLFDEVEKANVTVFNT
LLQVLEDGRLTDSHGRTVDFKNTVIIMTSNLGADHLISGLTGEVTMQVARDNTMKEVKKH
FRPELLNRLDEIVMFHPLSHEHLTKIVQLQVNNVANRLAEKGVSMTVXALDYILAASYDS
VYGARPIRRWLERNVVTDISMMIVREEIDDDSIVCIDVNVDKTDLVYQIDENVVAKKTEQ
TSDVVIHSRNKRGRSNEETLTKKIKSEVIVID
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgaattatacgagatttgaccccaaggtccagcttatacttgcaaaggctcgaacactt
gccatcgtatcgtcacatgttcaagtaactcctctgcatctcggagttggtttgatttct
gacaagactggtgttttctatcgagcaatcaccactgcaggaggaagcgaactcttggct
cagtcagctgtcaaagtcatcaaacaagccttaaaaaagctcccaaaacaggttcctcca
ccaactggagccattcctcgatacccaagtcgtaagaatcttccaaaacagactcctcca
atatcgaatggggccattcctcaatatccaggtcttaacatacctcaaaatcccattccc
ttcttaactagaaccattcctcaaaacaatgcaagtcttgttatggtcttaaatcgtgca
caaacgaagcccggggagaccagtgtgggagtagaggcattggtgattagtcttcttgat
gattctcaaatcagggatttgttgaaagaagctggttctgtaccagagaaggttaagtct
gaggtggagaagcttggtggcgaggtaaaccttcaggctttgaagacttatgggatagat
ttggttgagcaagtaggtaagcttgatcctgtcattggccgagacaaggagattagaaga
gttgttgggattctctcaaggagaaccaagaacaaccccgtgcttattggtgagccaggt
gttggaaaaactgctgtggttgaaggtttggctcaaaggatattgaaaggagacgtgcct
atcaatcttaccgatgtaaagctcttttccttggacttgggtgcaatggttgccggaaca
acactacgtggacaattcgaagaaagattgaagtcggtcttgaaagaagttgagaatgct
caaggcaaagttgttctctttatcgatgagatccacatggctcttggtgctggaaaggca
agtggctccacggatgctgctaatttgcttaagcctatgttagcaagaggtcagcttcgt
tgcattggtgctactacgcttgaggaataccgaacacatatcgagaaagatgctgcattc
gagagaaggttccaacaagtgtatgtagctgagcctagtgtccctgacactatcagtatt
cttcgagggcttaaagaaaaatatgaaggacaccatggtgttcgtatccaagacagtgct
cttgttgtttctgctcaattgtctgcgcgttacatcactgctcgacgtttaccggataag
gcaattgatttggttgatgagtcttgtgcacatgtgagagtccagcttgatagtcaacca
gaagaaattgattaccttgaaagaaaaacaatgcaactaaagatagagattcatgctctc
gaaaaggagaaggacgacaaagctagcgaagctcgcctagtcgaagtgaggaaagagctt
gatgacttgagggacaagcttgagcctcttacaataaaatacaagaatgagaaaaggata
attaatgaaactcggagtcttaaacagaaacgagatgagctcatgattgctctacaagag
gctgagagacaatatgaccttcctaaagctgctgatctaagatatggggcaattcaggaa
gtagaatccgcgatagcaaaattagaaaagagtgttaaagataacgtgatgcttacggaa
actgttgggccagagaatattgctgaggtagtgagccgatggactgggattccagtgact
gcacttgaccagaacgagaagaagaggctgatttctcttgctgataggttgcacgagaga
gttgttggacaagacgaagccgtgaaagctgtagctgcggcaattctaaggtcaagggtt
ggactaggaaggccacaacaaccatctggttcctttcttttcctcggtccaactggtgtt
ggtaaaactgagctggctaaagctcttgctgagcaactcttttacgatgaaaacctactt
gttaggcttgatatgtcggagtatatggatagatccactgttaataaacttataggggca
ccacccgggtacattggtcatgaagaaggtggacaactaaccgaacccgtgaggagacga
ccttactgtgttgtactatttgatgaagttgaaaaggccaatgttactgtattcaacacg
ctacttcaagtgttagaagacgggagattaaccgattcgcatgggaggacagtcgatttc
aaaaacacagtgatcataatgacttctaaccttggtgctgaccaccttatttcagggctt
actggtgaagtgacaatgcaagtggctcgagacaacacaatgaaagaggtgaaaaaacat
ttcaggccagagctgttaaacagattggatgagatagtgatgtttcatcctttgtcccac
gagcatttgacaaaaattgttcaactccaagtgaataatgttgctaatcgtcttgctgag
aaaggtgtatctatgactgtanntgcattggactacattttagcagcgagttacgactcg
gtgtatggtgctaggcctattagaagatggctagagaggaatgtggtcacagatatatcg
atgatgattgtacgagaagaaatcgatgacgactccattgtgtgcattgatgtaaacgtg
gataaaactgatcttgtctaccaaatagatgagaatgtggttgcgaagaagacagagcaa
acgtcagatgttgtgattcattcacggaataagaggggaagaagcaatgaagaaacttta
accaaaaaaataaaaagtgaagtcatagtgatagattga
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integrated database retrieval system
