Arabidopsis lyrata (lyrate rockcress): 9307336
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Entry
9307336 CDS
T01578
Name
(RefSeq) ribonuclease TUDOR 1
KO
K15979
staphylococcal nuclease domain-containing protein 1
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNase
TUDOR
Motif
Other DBs
NCBI-GeneID:
9307336
NCBI-ProteinID:
XP_002873305
UniProt:
D7M0I0
LinkDB
All DBs
Position
Unknown
AA seq
990 aa
AA seq
DB search
MATTTENQWLKGRVKAVTSGDCLVITALSHNRAGPPPEKTITLSSLMAPKMARRGGIDEP
FAWESKEFLRKLCIGKEVAFKVDYKVEAIAGREFGSVFLGNENLAKLVVKNGWAKVREPG
QQNQDKVSPYIQELLQLEEQAKQEGYGRWSKVPGAAEASIRNLPPSAIGDSAGFDAMGLL
AANKGKPMEGIVEQVRDGSTIRVYLLPEFQFVQVFVAGVQAPSMGRRTTNGSVVETVPDE
PNGDVSAESRGPLTSAQRLAASAASSEVSSDPFATEAKYFTEHRVLSRDVRIILEGVDKF
NNLIGSVHYSDGETVKDLGLELVENGLAKFVEWSANMMEDEAKRKLKAAELQCKKDRVKM
WGNYVPPATNSKAIHDQNFTGKVVEVVSGDCLIVADDAVPFGSPAAERRVCLSSIRSPKM
GNPRREEKPAPYAREAREFLRQRLIGKQVIVQMEYSRKVTQADGPTTSGAADRFMDFGSV
FLPSPAKGDSDEVAASSAAAVNGSQPVGVNIAELVLARGFGNVVRHRDFEERSNHYDALL
AAEARALSGKKGIHSAKESPAMHITDLTVAAAKKAKDFLPSLQRIRRIPAVVEYVLSGHR
FKLYIPKITCSIAFSFSGVRCPGRGEPYSEEAISVMRRRIMQRDVEIEVETVDRTGTFLG
SMWESRTNVATVLLEAGLAKMQTSFGADRIAEAHLLEQAERSAKNQKLKIWENYVEGEEV
SNGNTNTVETRQKETLKVVVTEVLGGGRFYVQSAGDQKVASIQNQLASLSIKDAPIIGSF
NPKRGDIVLAQFSLDNSWNRAMIVTAPRAAVQSPDDKFEVFYIDYGNQETVPYSAIRPID
PSVSTAPGLAQLCRLAYIKVPSLEEDFGAEAGEYLHTVTLGSGKEFKAVIEERDTSGGKV
KGQGTGTEFVITLIAVDDEISVNAAMLQEGIARMEKRKKWGHKDKQAALDALEKFQEEAR
KSRIGIWQYGDIESDDEDTGPARKPAGGRR
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaacgactgagaaccaatggcttaaaggaagagtgaaggctgttacctccgga
gactgcttagtgatcacggctttgagccacaacagagctggacctccaccggaaaagacc
attactttatcttctcttatggcacctaagatggcccgcagaggaggtatagatgagcct
tttgcatgggaaagcaaggaatttttgaggaaactttgcataggaaaggaggttgcattc
aaagttgattacaaagtggaagctattgctggaagagaatttggctctgttttccttggc
aatgaaaatcttgctaagcttgttgttaaaaatggttgggcaaaggttagggagccaggt
cagcagaatcaggacaaggttagtccttatattcaagagttgctacagctcgaagagcag
gccaagcaggaaggatatggtcgttggagcaaggttcctggtgctgctgaggcatctatc
agaaaccttcctccttctgccattggggattctgctggctttgatgccatgggcctttta
gctgcaaacaagggcaagcctatggaaggtattgtggagcaagtgcgtgatggaagtact
attcgggtttatcttcttccagagttccagtttgtgcaagtatttgttgcgggagttcag
gctccatcaatgggaaggcgaaccacaaatggaagtgttgttgagacagttccagatgag
ccgaatggagatgtttctgctgagtcacgaggtcctctaacgtcagctcagagacttgct
gcctctgcagcatcgtctgaggtttcctctgatccatttgcaactgaagccaagtacttt
accgagcaccgtgttcttagtagagatgttcgcattattcttgaaggcgttgacaaattc
aacaatctgattggttcagttcattattctgatggggaaacagttaaagacttaggtttg
gagctcgttgaaaatggtcttgcaaaatttgttgaatggagtgctaacatgatggaggat
gaagctaagagaaagttgaaagctgcagaacttcaatgcaagaaagatagggttaaaatg
tggggaaattacgttcctccagctacaaactctaaggcaattcatgaccagaactttacg
ggaaaggtagtggaagtggtgagtggggattgtcttatagttgccgatgatgctgttcca
tttgggagtccagcggcagagagacgggtctgtctttcgagtatcagatctcccaaaatg
ggcaacccacgccgagaagagaaaccagctccttatgctcgggaagcaagagaatttctg
agacaacggcttattggcaaacaggttattgttcaaatggaatactcaaggaaagtcacc
caagcagatggtcctaccacatctggagctgctgataggttcatggattttggctctgtg
ttccttccatctcctgccaaaggcgattctgatgaagtggctgcatcatctgctgcagca
gttaatggcagtcagccagttggtgtgaatattgctgagcttgttcttgcccgtggtttt
ggaaatgtggttagacatagagattttgaagagcgatcaaaccattatgatgctcttctg
gctgctgaagctcgtgctctgtctggaaagaaaggaatccattctgcaaaagaatctcca
gccatgcacatcacagacctaactgtggcggcagctaagaaagctaaagatttcctgcca
tccttgcaaagaatcaggagaatacccgctgttgtggaatatgtcctcagcggacatcgg
tttaagctttatatcccaaagataacatgcagcattgccttttcattctctggtgtcaga
tgtcctggccgtggcgaaccttattcagaagaggctatctctgtaatgagacgtaggatc
atgcagagagatgttgagattgaagttgaaaccgtggatagaaccggtactttcttggga
tccatgtgggagtcgaggacgaatgtggcgacagttctgcttgaagctggcttagcaaaa
atgcagactagctttggtgcagacaggatcgccgaagcacatcttcttgaacaggcagag
agatctgctaaaaaccagaaactgaagatttgggaaaactatgttgaaggagaagaagtc
tcaaacggaaatacaaataccgtagaaaccaggcaaaaggagaccttaaaggttgttgtt
acagaagtacttggaggtggtcggttctatgttcaatctgctggagatcagaaagtagct
tcaattcagaaccagcttgcatccttgagtattaaagacgctcccattatcggatccttt
aatccaaagagaggtgacatcgtccttgcacagtttagccttgataactcctggaaccgt
gcaatgattgtgactgcaccccgagcagcggttcaatccccagatgataaattcgaagtt
ttctacatcgattatggaaaccaggagacagttccatacagcgcaatcagaccaatagac
ccttctgtatccacagcaccagggctcgctcagctctgcagacttgcctacataaaggtt
ccaagcttggaagaagactttggtgctgaagccggagagtatttgcatacggtaacgctg
ggtagtggtaaagagttcaaagcagtgatagaagaaagagacacatctggaggcaaagtc
aaagggcaaggaactggaactgaatttgttatcacactcattgctgtcgatgatgagatc
tctgtaaacgctgcaatgcttcaggaaggaatagcgagaatggagaaacgtaagaaatgg
gggcacaaagacaaacaagctgctcttgatgctttagagaagttccaagaggaagctcgc
aagtcgagaattggaatctggcagtacggtgacattgagtccgatgatgaggacactggt
ccggccagaaaacctgctggtggtcgccggtaa
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