KEGG   Arabidopsis lyrata (lyrate rockcress): 9307403
Entry
9307403           CDS       T01578                                 
Name
(RefSeq) uncharacterized protein LOC9307403 isoform X1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:aly00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:aly04812]
    9307403
Cytoskeleton proteins [BR:aly04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     9307403
SSDB
Motif
Pfam: CNOT1_CAF1_bind Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_Gbeta WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I Beta-prop_DCAF4 Beta-prop_EML W2 Beta-prop_WDR36-Utp21_1st Beta-prop_SCAP WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st Beta-prop_RIG_2nd
Other DBs
NCBI-GeneID: 9307403
NCBI-ProteinID: XP_020878151
LinkDB
Position
Unknown
AA seq 761 aa
MNTKRAYKLQEFVAHSAAVNCLKIGRKSSKVLVTGGEDHKVNLWAIGKPNAILSLYGHSS
GVDSVTFDASEGLLAAGAASGTTKLWDLEEAKDTNLKIWDIRKKGCIHTYKGHTRGVNVL
RFTQDGRWTVSGGKDYVVKDFIKNLLSSASEKSMASDSIQVPDEEFRSKLGNIIQRVQYL
PGIQNVTRLSKEFTELSAFHQPKDFFFVQIMLVKNSQSAIFEPIFHDSYFDFLEKVNSPS
LYTETVKTTCLICKAILEPEIQLHPMVNQQVLSHVTKNLGKWLGKLIVRTDCWSLLKTDL
ALEPFIVTAYERGLMSKSIPFVIEVLESCRRSPLCPSFETILSLLSEIYMMPNLQDGLLF
SIEGLLEKFNVLEPLKPASTLQEKHRQMNLNVDFEERKIIVKPLKFGKYDDRAPRDSHLI
ASRIQFSTEEFLVTIKKPDSFFGIYPGLVRKMEDAVLEVVEKAGPLLIKLAATVGCEAAE
AGAIIADQHRRMDGSVTRISFLMGGNAGSVPVSVRLAEKYIRQMSKKFLGGWMSYLVRDL
LQQQGVPHALQPAIVESVIDDNLEGIHKKLGACAKTEAHGYSRRQPVIWTPTENQIFVKE
IGNALEKDFDVDAMSNLLKSWRESKDKLAALCTVICNQFIFQKDPPSVFMYTKKMAYLDP
LVKGRNGGMLDLLHALEKFLKTHPQPRGLEDLLLDGFITTGYLSEKAILEWYEEGSKRDG
NNARLFESVRHLVPEEPDYDIWAEESDFDFVAEEPNFVDMI
NT seq 2286 nt   +upstreamnt  +downstreamnt
atgaacaccaagcgcgcctacaagctccaggaatttgtggcacattccgctgctgttaat
tgtcttaagattgggaggaagtcctcaaaggttctcgtaacaggcggggaagatcacaag
gtcaatctgtgggctattggtaagcccaacgccatcctgagcttgtatgggcactcgagt
ggggttgattcagtaacgtttgatgcttcggaaggcttactagcagcaggagctgctagt
ggtacaactaaactttgggatctggaggaggcaaaggacacaaatctcaagatatgggat
ataagaaagaagggctgcatccatacttacaagggtcacactcgaggggtcaatgtactc
agattcactcaagatggtcgttggactgtatctggaggaaaagattatgttgtcaaggat
ttcatcaaaaacctcctctcttctgcatcagagaaaagtatggcttcggattccatacag
gtaccagatgaagagtttcgaagtaaactaggcaatattatacaacgcgtgcagtatctc
cctggtatacaaaatgtgactcggttatctaaagagttcaccgaactttcagctttccat
cagcctaaggacttcttttttgtgcaaatcatgctcgtgaaaaattctcagagtgctatt
tttgagcccatttttcatgatagttactttgatttccttgagaaagttaattctccttca
ttgtacaccgagactgtaaaaactacttgtctgatttgtaaggctatcttggaacctgag
attcagttgcatcctatggtcaaccaacaagttttatcacatgttacaaaaaacctaggc
aagtggcttggtaagttgatcgtccgcactgactgttggtctttgttgaagactgatcta
gctttggagcccttcatagttacggcctacgagcggggtttaatgtctaagagcatccca
tttgtaatcgaggttttggagtcttgcagaagaagtcctttgtgtccatcttttgagacg
attctcagcctgttgtctgagatttacatgatgccaaacttgcaagatggtcttctcttt
agcattgagggcctgttggagaagtttaatgttctggaaccactaaagccagcttccaca
cttcaagagaagcacagacaaatgaatctcaatgttgattttgaagaacgtaaaatcatt
gtaaaaccgcttaaattcgggaaatatgatgacagagcacctcgtgacagtcacctcatt
gcttccagaatacaattctctactgaggagttccttgttactatcaagaaaccagattct
ttttttggaatttacccagggcttgttaggaaaatggaagatgctgtgttggaggttgtg
gaaaaagctggacctctgcttatcaaacttgctgcaactgttggatgcgaggccgcagag
gcaggtgctataattgctgatcaacatcgtagaatggatggaagtgtcactaggatatcc
tttttgatgggtgggaacgccggaagtgtcccggtgtctgtgcgtttggctgaaaagtat
atccgacaaatgagcaagaaatttcttggcggctggatgtcatatcttgttcgggattta
cttcagcaacaaggtgttccacatgctcttcaacctgcaatagttgaaagtgtgattgat
gacaaccttgaaggcattcataagaaacttggagcctgtgctaagacggaggcacatggg
tactctaggaggcagcctgtcatatggacaccaactgaaaaccaaatttttgtgaaggaa
ataggcaatgccttggagaaagattttgatgttgatgctatgagcaacttgctgaaatct
tggagagagtctaaagataaactggctgcattatgcacggtcatatgcaaccaatttatt
ttccagaaagatcccccaagtgtttttatgtatacaaagaagatggcgtacctagatcct
ctcgtgaaaggaagaaatggaggaatgcttgatctgctgcatgcgttggagaaattcctg
aaaacacaccctcaaccgagggggctggaagatttgttgcttgatggtttcattacaaca
gggtatttaagcgagaaggcgattctggaatggtatgaagaaggtagcaaaagggatgga
aataatgctcgactgtttgagtctgtcagacatcttgtacctgaagagccagattatgat
atctgggccgaagagtcagattttgatttcgtggctgaagagccaaatttcgttgacatg
atttga

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