Arabidopsis lyrata (lyrate rockcress): 9307736
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Entry
9307736 CDS
T01578
Name
(RefSeq) chaperone protein ClpB3, chloroplastic
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
aly03110
]
9307736
Chaperones and folding catalysts [BR:
aly03110
]
Heat shock proteins
HSP100
9307736
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
ClpB_D2-small
AAA
AAA_5
AAA_16
AAA_22
Sigma54_activat
nSTAND3
AAA_14
TniB
AAA_18
AAA_7
IstB_IS21
Zeta_toxin
RNA_helicase
Mg_chelatase
NACHT
AAA_24
AAA_25
NBD_SMAX1
ResIII
Torsin
KIF9
Motif
Other DBs
NCBI-GeneID:
9307736
NCBI-ProteinID:
XP_002873724
UniProt:
D7M7C7
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MATATTTATAAFSGVVSVGTKTRRISTFSHLQPSVAFPAKPNSFKLLKFKQSARLTRRLE
HRPFFVRCEASSSNGRLTQQEFTEMAWQSIVSSPDVAKENKQQIVETEHLMKALLEQKNG
LARRIFSKIGVDNTKVLEATEKFIQRQPKVYGDAAGSMLGRDLEGLFQRARQFKKDLGDS
YVSVEHLVLAFADDKRFGKQLFKDFQISEKSLKSAIESIRGKQSVIDQDPEGKYEALEKY
GKDLTAMAREGKLDPVIGRDDEIRRCIQILSRRTKNNPVLIGEPGVGKTAISEGLAQRIV
QGDVPQALMNRKLISLDMGALIAGAKYRGEFEDRLKAVLKEVTDSEGQIILFIDEIHTVV
GAGATNGAMDAGNLLKPMLGRGELRCIGATTLDEYRKYIEKDPALERRFQQVYVDQPTVE
DTISILRGLRERYELHHGVRISDSALVEAAILSDRYISGRFLPDKAIDLVDEAAAKLKME
ITSKPTALDELDRSVIKLEMERLSLTNDTDKASRERLNRIETELVLLKEKQAELTEQWEH
ERSVMSRLQSIKEEIDRVNVEIQQAEREYDLNRAAELKYGSLNSLQRQLNEAEKELNEYL
SSGKSMFREEVLGSDIAEIVSKWTGIPVSKLQQSERDKLLHLEEELHKRVVGQNPAVTAV
AEAIQRSRAGLSDPGRPIASFMFMGPTGVGKTELAKTLASYLFNTEEALVRIDMSEYMEK
HAVSRLIGAPPGYVGYEEGGQLTETVRRRPYSVILFDEIEKAHGDVFNVFLQILDDGRVT
DSQGRTVSFTNTVIIMTSNVGSQFILNNTDDDANELVYETIKERVMNAARSIFRPEFMNR
VDEYIVFQPLDREQINRIVRLQLARVQKRIADRKMKINITDAAVDLLGSLGYDPNYGARP
VKRVIQQNIENELAKGILRGDFKEEDGILIDTEVTAFSNGQLPQQKLTFKKIESETADAE
QEEEEAFSKQSR
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggctacgacgactgctacggcggcgtttagtggtgtagtcagcgtaggaacg
aagactcgaaggatttctacgttttctcatcttcaaccttctgtggcttttccggcgaag
cccaattcattcaaacttctgaaatttaagcagagcgcgaggctcacacggcggcttgag
catcggccattctttgtccgatgtgaagcttcttcttctaatggaaggcttacacagcaa
gaattcacagaaatggcgtggcaatcgatagtttcgtcaccagatgttgcgaaagagaat
aagcaacagattgtggagacagagcatctaatgaaagctcttttggagcagaagaatggt
ttagctcgcaggattttctctaagatcggtgtggataacactaaggttctagaagcaact
gagaagttcattcaacgccagccaaaggtgtatggagatgctgctggttcgatgttaggg
cgtgatttggaaggtctgttccagagagcaagacagtttaagaaagatttaggagactct
tatgtgtcagtggagcatttggttcttgcttttgctgatgataagcggtttgggaaacag
ttgttcaaggattttcagatatcagagaagagcttaaaatctgcaattgaatccattaga
gggaaacaatcagtcattgaccaagatccggaaggcaagtatgaggcattggagaagtat
ggaaaagatttgacagcaatggcaagagaaggaaaacttgatcctgtgattggtagagat
gacgagatccgaagatgcattcagattctctcgaggagaacaaagaacaaccctgtgttg
atcggtgaaccaggtgttggtaaaaccgcaatttcagaaggacttgctcagaggattgtg
caaggagatgtacctcaagcattgatgaacagaaagttgatatctcttgatatgggtgct
ctcattgctggagcaaagtatcggggagaattcgaagatagactaaaggctgtgcttaag
gaagtcacagactcagaaggccaaatcattttgttcatcgatgagatccacacagttgtt
ggtgcaggtgcgactaatggggccatggatgctggtaatctgctgaaaccaatgctgggt
cgaggcgagttacgctgtatcggtgcaacaacgctcgatgaatataggaaatacatagag
aaagatccagccttggaacgtaggtttcaacaggtttatgtcgatcaacctacggttgaa
gacacgatttcgattctccgtggtttgcgggaaaggtatgaacttcatcatggagttcgc
atctcagatagtgctctagtggaagctgctatcctctcggaccgttacatcagtggccgg
tttctacccgataaagcaattgacttggtcgatgaagcggcagccaaattgaaaatggaa
atcacttcgaaaccgacagctcttgatgagcttgaccgctcggtgataaagcttgaaatg
gagaggctttcactcaccaatgatacagacaaagcttctagagagagattgaatcgaatt
gaaacagagttagtgttattaaaggagaagcaagctgaattaaccgaacagtgggagcac
gagaggtctgttatgtcccgtcttcagtcgattaaagaggagattgatcgagtaaacgtc
gagatccagcaggcggaacgtgaatacgatcttaaccgtgcagctgagctcaaatacgga
agcttaaactcattgcagcgacagcttaatgaagcagagaaagagctgaacgagtactta
agctccgggaaatctatgttcagagaagaggttttgggtagcgatattgccgagattgtg
agtaaatggactggaatcccagtatcgaagcttcaacagtctgaaagagataaacttcta
catttggaagaagaattgcataaaagggtagtcggtcaaaacccagcagtgactgcagta
gctgaagcaatccaacgatcaagggctggtctttcggatccaggccgtccaatagctagt
ttcatgtttatgggaccaaccggtgtgggtaaaacagagctagccaaaacacttgcttct
tatttgttcaacacagaagaagctttagtcagaattgacatgagtgagtacatggagaag
catgctgtctctaggctcattggagctccacctggatatgttggttacgaagaaggagga
cagttaacagaaacggttagaaggcggccttattcggtcatcctctttgatgagattgag
aaagctcatggagatgtcttcaatgtgtttctccaaatcttggatgatgggcgagtcaca
gattctcaaggacgtactgtgagtttcaccaataccgtcattatcatgacttcaaatgtt
ggttcgcagtttattctgaacaacacagatgatgatgctaatgagctcgtttatgaaacg
attaaagagagagtgatgaatgctgcaagatcaatctttcgtcctgaattcatgaatagg
gttgatgagtatatagttttccaacctcttgaccgcgagcagatcaaccgcattgttcgg
ttacagctggcacgtgtgcagaagcgaattgcagacaggaaaatgaagataaatatcaca
gatgcagcagtcgatcttctcggaagcctagggtatgatccaaactatggagctagacct
gttaagcgtgtaatacagcaaaacattgagaatgagctcgctaaaggtatcttgagagga
gatttcaaggaggaagatggcattttgatcgataccgaggtcacagcgttctccaatggc
cagttacctcagcaaaagctcacattcaagaagattgagtcagaaacagcagatgctgaa
caagaagaagaagaagctttctcaaaacagagcagatga
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integrated database retrieval system
