Arabidopsis lyrata (lyrate rockcress): 9308818
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Entry
9308818 CDS
T01578
Name
(RefSeq) polyubiquitin
KO
K08770
ubiquitin C
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
9308818
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9308818
Ubiquitin system [BR:
aly04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
9308818
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Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
Dsc3_N
TBK1_ULD
DUF2604
Ubiquitin_5
Plexin_RBD
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
9308818
NCBI-ProteinID:
XP_020876399
LinkDB
All DBs
Position
Unknown
AA seq
489 aa
AA seq
DB search
MNTQRPHLLHNSDSKFLKQSKIILSNLSTVIKMQIFVKTLTGKTITLEVESSDTIDNVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH
LVLRLRGGF
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaatacccaaagacctcatcttcttcacaattcagattccaaatttctcaaacaatct
aaaatcattctctcaaatctctcaaccgtgatcaagatgcagatctttgttaagacactc
accggaaagactatcaccctcgaggtggaaagctctgacaccatcgacaacgttaaggcc
aagatccaggacaaggaaggcattcctccggatcagcaaaggcttattttcgccggaaaa
cagctagaagatggccgcacgttggctgattacaatatccagaaggaatccaccctccac
ttggttctcaggctccgtggtggtatgcagattttcgtcaagaccctaacgggaaaaact
attactcttgaagtggagagttctgacaccatcgacaacgtgaaggccaagatccaagat
aaggagggtattcctccggatcagcagaggttgatcttcgccggaaagcagttggaggat
ggcagaacccttgctgactacaacatccagaaggagtcgacccttcatcttgttctcagg
ctccgtggtggtatgcaaatcttcgtcaagacgttgactggaaagactatcactttggag
gtggagagctctgacaccatcgacaatgtcaaagccaagatccaggacaaagagggtatt
cctccggaccagcagaggttgatcttcgccggaaagcaacttgaagacggcagaactttg
gctgactacaacattcagaaggagtctacccttcatttggtgttacgtctgcgtggaggt
atgcagatttttgtgaagactctcaccggaaagaccatcaccttggaggtggagagttca
gacactattgacaacgtgaaggccaagatccaggataaggaaggtatccctccggaccag
cagaggttgatcttcgccggaaaacagttggaggatggtcgtaccttggcggattacaac
atccagaaggagtcgacccttcacttggtgttgcgtctccgtggaggtatgcagatcttc
gtcaagactttgactggcaagacgatcactcttgaagtcgagagctctgacaccattgac
aacgtgaaggccaagatccaggacaaggaaggcattcctccggaccagcagcgtctcatc
ttcgctggaaaacagcttgaggatgggcgtactttggcggactacaacatccagaaggag
tctactcttcacttggtgctaaggcttcgtggtggtatgcagattttcgtgaagactctg
accgggaagaccattaccctcgaggtagagagctctgacaccattgacaacgtgaaggcc
aagatccaggacaaggaaggtatccctccggaccagcagcgtctcatcttcgctggaaaa
cagcttgaggatggtcgcaccttggctgactacaatatccaaaaggagtctactcttcac
ttggtgctccgtctccgtggtggtttctaa
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