KEGG   Arabidopsis lyrata (lyrate rockcress): 9309310
Entry
9309310           CDS       T01578                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    9309310
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aly03041]
    9309310
Spliceosome [BR:aly03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    9309310
 Complex B
    9309310
 Complex C
   U2 SnRNP specific factors
    9309310
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd ATP-synt_F6 Desulfoferrod_N
Other DBs
NCBI-GeneID: 9309310
NCBI-ProteinID: XP_020875966
LinkDB
Position
Unknown
AA seq 508 aa
MSSTLLEQTRSNHEEVERLERLVVQDLQKEPPSSKDRLVQGHRVRHMIESIMLTTEKLVE
TYEDKDGARDDEIAALGGQTATGTNVYSAFYDRLKEIREYHKRHPSGRLVDANEDYEARL
KEEPVIAFSGEEGNGRYLDLHDMYNQYINSKFGERVEYSAYLEVFSQPEKIPRKLKLSRQ
YRKYMEALLEYLVYFFQRTEPLQDLDRILSKVWSDFEEQYADGKVEGWENGQDNELIPSQ
HTVIDLDYYSTVEELVDIGPEKLKEALGALGLKVGGTPQQRAERLFLTKHTPLEKLDKKH
FAKPPHNGKQNGDAKSTHESENAKEIALTEAKVKKLCNLLDETIERTKQNVVKKQSLTYE
EMEGEREGEEANAESESDDEDGEIYNPLKLPIGWDGKPIPYWLYKLHGLGQEFKCEICGN
YSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKRIQERQGVNKWRP
ELEEEYEDREGNIYNKKTYSDLQRQGLI
NT seq 1527 nt   +upstreamnt  +downstreamnt
atgtcgtcgactctcctcgagcaaactcgctccaatcacgaagaggttgaaagattggag
cgattggttgtgcaagatctacagaaagagccaccgtctagcaaggacagattggtccag
ggtcatcgtgttcgtcacatgattgagtccatcatgctcaccactgagaaacttgttgaa
acctacgaagataaggatggggccagggatgatgagattgcagcgcttggtggccagact
gcgactgggacaaatgtgtatagtgcattttatgatcgattgaaagagatacgtgaatat
cataaaaggcatccttctggacgtcttgttgatgctaatgaagactacgaagcacgcctg
aaggaggaaccagttattgcgttcagtggagaggaaggcaatggtcggtacttggacttg
catgatatgtataaccagtacatcaactctaaatttggggaaagggttgaatattctgct
taccttgaggttttttcccaaccagagaaaataccgcgtaaactgaagttatcgaggcaa
tacaggaagtatatggaagctctgctagagtacttggtctactttttccagcgaaccgag
ccgttgcaagatcttgaccggatactttctaaggtttggtctgattttgaagagcaatat
gcagatggaaaagtagaaggctgggagaatggccaggacaatgaacttattccatctcag
catactgtcatagatcttgattactacagtactgtcgaggaactggtagatataggacct
gaaaagctaaaggaggcattgggggcattaggactgaaggttggtggtactccgcagcag
cgtgccgagagacttttcctgacaaagcatacgcctttggaaaagctggataagaaacat
tttgccaaacctccacacaacgggaaacaaaacggagatgccaaatcaacacacgagtca
gaaaatgctaaagagattgcactaacagaggccaaagtgaagaaactctgcaatttactt
gatgagaccatcgaaaggacaaaacaaaatgttgtaaagaaacagtcgttaacatatgaa
gaaatggagggagaacgtgaaggggaggaagctaatgccgaatcagaaagtgatgatgag
gacggtgagatttacaatccgctgaagctgccaataggttgggatgggaagccgatacca
tactggctctacaaacttcatggccttggccaggagtttaaatgcgagatatgtgggaac
tatagctattggggaagaagggcttttgagagacattttaaagaatggcgacaccaacat
ggaatgcgttgcctaggaatcccaaacacaaagaacttcaacgaaatcacttcgattgag
gaagcgaaagagttgtggaagaggatacaggagaggcaaggagtgaacaaatggaggcca
gaacttgaagaagaatatgaagatcgtgaaggtaacatttacaacaagaagacttactct
gatcttcaacgccaaggtcttatctga

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