Arabidopsis lyrata (lyrate rockcress): 9312481
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Entry
9312481 CDS
T01578
Name
(RefSeq) nuclear pore complex protein NUP93B
KO
K14309
nuclear pore complex protein Nup93
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
9312481
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aly03019
]
9312481
Messenger RNA biogenesis [BR:
aly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
9312481
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
9312481
NCBI-ProteinID:
XP_020881525
LinkDB
All DBs
Position
Unknown
AA seq
860 aa
AA seq
DB search
MANDQEMSGWTDLLHSSTKLLEQATPSSQFPPLQRNLDQLEALSRKLKAKTLRNEAPSES
ISATRLLAREGINADQLSRDLKSFELKTTFEDVFPAETTNVEEYLQQVHEMAMVSAIQEA
QKDNVRSFNNYMLKVLEEDCRKEKRDFLHSLSKISMLPKTKMIDSSRGSHADSLVPLSPQ
VSSKPGTELMSMTNKPIHEKKAYVYAEVVKKLNSARERGLPFKPATSFNGAYESLGIDLT
RGKSVNMQKIWQLIQAMTGEDSAVQHGVSKRMALVIGARRHLECGHEKHIMDTIQSHPTQ
AALGGSVGNMQRIRAFLRIRLRDYGILDFDSGDARRQPPVDTTWQQIYFCLRTGYYEEAR
EIAQSSRSSQQQFAPLLTEWITTGGTVAAHTAAIASEECEKLLRMGDRFGQTTYDKKKLL
LYTIISGSRRQIDRILRDFSTLFNTIEDFLWFKLSCVRDVAGGSSSVILNDGLVPYSLDD
LQVYLNKFEPSYYTKNGKDPLVYPYVLLLSIQLLPAIMHMSNEAGDEGYNIDAVHVAISL
VDHSILSEGSGTGHKLSVMDANAEASSMIRQYGSMYLHHGDLQMTLEYYAQAAIAVGGGQ
QAWSGRSNVDQQRQRNLMLKQLLTEILLQENGVYFLLGARGSGEEGELGRFLPDIKLRQQ
FLIEAAHQCQEAGLYDQSIKLQKRVGAYSSALETINKCLSEAICSLVRGRPDGETHTEGL
ILSGNDILNAYKYHPDVSGQERDRVMEQETILRELEAILSIHKLARLNKHLDAIREVAKL
PFLHLDPRLPDTTSDEFQRASSYFQTCVPDLLKVALTCLDNVADTDGSIRGMRSKIAGFL
ASNTQRNWPRDLYEKVARSF
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgaccaggagatgagtggatggactgatcttctccattcttctactaagctc
cttgagcaagcgactccttcgtctcagtttcctcctcttcagaggaatttggatcaattg
gaagcattgtcgaggaaactcaaggctaaaaccctaagaaacgaagcgccttcagagtct
atttctgccacaagactccttgcacgggagggaatcaatgcagatcaattatctcgtgat
cttaagtcatttgagttgaagaccacatttgaggatgtattccctgccgagacaacaaat
gttgaagaatatctgcaacaggttcatgaaatggctatggtatcggctatacaggaggct
caaaaagataatgttcgaagctttaacaactacatgttgaaagtgttggaggaggactgt
aggaaagaaaaacgtgactttcttcatagccttagcaaaatttcaatgttacctaagacc
aagatgatcgattcaagcagaggctctcatgctgattcactagtgcctttgagtcctcaa
gtatcttcaaaacctggaacggagctcatgtctatgactaacaaacccattcatgagaaa
aaggcttatgtctatgccgaggttgtgaagaaactaaactctgcaagagaaagaggcttg
ccatttaaacctgcaacatcgttcaatggtgcatatgaaagtctaggaattgatttgact
cgtggaaaatcagtcaacatgcagaaaatatggcaacttattcaggcaatgacgggtgaa
gattcagcagtacaacatggtgtttccaagaggatggccctcgtgataggtgcaagacgc
cacttggaatgtgggcatgagaaacatataatggatacaattcaaagtcatcctacacaa
gctgctcttggtggatcagttggaaatatgcaaagaattcgtgcttttcttcggattcgt
ctgagagattatgggattttggattttgattcaggtgatgctcgtaggcagcctccagtt
gatactacttggcagcagatatatttttgcttgagaactggttattatgaggaagctaga
gaaattgcccagtcatctcggtcatctcaacaacagtttgctcctctgcttacagagtgg
attaccacaggtggtactgtggctgcacataccgctgctattgcttctgaggaatgtgag
aaattgttaaggatgggtgatcggtttggccaaacaacatatgacaagaagaagctccta
ctctacactatcatatctggttcccgaaggcaaattgatcgcatcttgagggatttttct
acgctctttaacacaatagaagattttctctggttcaaactatcatgtgtacgtgacgta
gctggtggatcttcatctgtgatcttgaatgatgggctagtgccttacagtttggatgat
cttcaggtttatcttaataaatttgagccatcttactacactaagaatggcaaagatcct
ctggtatacccatatgttttgcttcttagcatccagttactaccggcgatcatgcacatg
tccaacgaagctggagatgaagggtataacattgatgctgtccatgtagctatttcgcta
gtggaccattccattctatctgaaggatctgggactgggcacaaactaagtgtgatggat
gctaatgctgaggcatctagcatgattaggcaatatgggtcaatgtatttgcatcatggt
gatctgcaaatgacgctggaatactatgcacaagctgctattgcagtaggtggggggcaa
caagcttggtctggaagaagtaatgttgatcaacaaaggcaaaggaacttgatgctaaag
caactactgactgagattttgttacaagagaatggtgtttactttctacttggtgctaga
ggttccggtgaagaaggtgagcttggaagatttctgcctgatataaaattgaggcagcag
ttcttgatcgaagctgcacatcaatgtcaagaagctggattatatgaccaatcgataaaa
ctacaaaagagagttggtgcgtattcgtctgccttggaaaccataaacaaatgtctatct
gaagctatttgctccctcgtccgtggaaggccagatggtgaaacccacacagaggggctt
attctctcaggcaacgatattctcaatgcatacaaatatcaccctgatgtcagtggccag
gaaagagatcgggttatggaacaagaaacaatactaagagagcttgaggcaatactatcg
atccacaagttagccagactaaacaaacatctagatgccataagagaagtcgcgaaactt
ccgttccttcatctcgatccaagactacccgacaccacctcagatgagttccagagagca
tcctcttactttcagacttgtgtccctgatttacttaaggttgctctgacctgtttggat
aacgtagctgacactgatggatcgatcaggggcatgagatctaagattgctgggtttctt
gcaagcaacacacagcggaactggcctcgagatttgtacgagaaggttgctcgaagcttt
tga
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