Arabidopsis lyrata (lyrate rockcress): 9318757
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Entry
9318757 CDS
T01578
Name
(RefSeq) DNA gyrase subunit A, chloroplastic/mitochondrial isoform X2
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aly03032
]
9318757
03400 DNA repair and recombination proteins [BR:
aly03400
]
9318757
Enzymes [BR:
aly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
9318757
DNA replication proteins [BR:
aly03032
]
Prokaryotic type
DNA Topoisomerases
9318757
DNA repair and recombination proteins [BR:
aly03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
9318757
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-GeneID:
9318757
NCBI-ProteinID:
XP_002884807
UniProt:
D7L923
LinkDB
All DBs
Position
Unknown
AA seq
950 aa
AA seq
DB search
MTPLLCHSTASIPNPNSFMSLSSTLRLSSSFLRRSFFRFPLTDPLCRLRRTEPSASRFFS
SRTPRSGQFVVGASKRADEQFKEESGANNGGLVVSGDESRIVPFELHKEATESYMAYALS
VLLGRALPDVRDGLKPVHRRILFAMHELGMSSKKPYKKCARVVGEVLGKFHPHGDTAVYD
SLVRMAQSFSLRCPLIQGHGNFGSIDADPPAAMRYTECRLDPLAEAVLLSDLDQDTVDFV
ANFDNSQKEPAVLPARLPALLLNGASGIAVGMATNIPPHNLGELVDVLCALIHNPEATLQ
ELLEYMPAPDFPTGGIIMGNLGVLDAYRTGRGRVVVRGKAEVELLDPKTKRNAVIITEIP
YQTNKATLVQKIAELVENKTLEGISDIRDESDRNGMRVVIELKRGGDPALVLNNLYRHTA
LQSSFSCNMVGICDGEPKLMGLKELLQAFIDFRCSVVERRARFKLSHAQQRKHNIEGIVV
GLDNVDEVIKLIKNASSHSSASAALQSEYGLSEKQAEAILEITLRRLTTLERKKVTDESS
SLTEQITKLEQLLSTRANILKLIEQEAIELKDRFSSPRRSMLEDSDSGDLEDIDVIPNEE
MLMAISEKGYVKKMKADTFNLQHRGTIGKSVGKLRVDDAMSDFLVCHAHDHVLFFSDRGI
VYSTRAYKIPECSRNAAGTPLVQILSMSEGERVTSIVPVSEFAEDRYLLMLTVNGCIKKV
SLKLFSGIRSTGIIAIQLNSGDELKWVRCCSSDDLVAMASQNGLVVLSTCDGVRTLSRNT
KGVTAMRLKNEDKIASMDIIPASLRKDMEEKSEDASIVKQSTGPWLLFVCENGYGKRVPL
SSFRRSRLNRVGLSGYKFAEDDRLAAVFVVGYSLAEDGESDEQVVLVSQSGTVNRIKVRD
ISIQSRRARGVILMRLDHAGKIQSASLISAADEEETEGTPTNETLEAVSL
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgactccattattatgccattccactgcttcaatccctaaccctaactctttcatgtct
ctctcctccactctccgtctatcttcctccttcctccgccgctccttcttccgatttccc
ctcaccgacccattatgtcgtctccgccgcactgaaccctccgcctcgcgtttcttctcc
tcccgtactccccggtccggccagttcgttgtcggtgcttccaaacgcgccgatgagcag
ttcaaggaagagtccggagctaacaatggcggtttggtggtttctggggacgaatctcgt
attgtgccttttgagcttcataaggaggctactgagtcctacatggcgtatgccctctct
gttttgcttggacgcgctttgcctgatgttagagacggactgaaaccagtacatcggaga
attctctttgcaatgcatgagttggggatgtcatctaagaaaccatacaagaaatgtgca
agagttgttggagaggttcttggtaagtttcatccgcatggagatactgctgtttatgat
tcgcttgttaggatggctcagagtttctccctgagatgtccacttatccaaggccatgga
aattttggctcaatagatgcagatcctcctgctgctatgcgttacaccgaatgcagactc
gatccactggctgaggcagtactgttgtctgatctggaccaagatacggttgattttgtg
gccaattttgataactctcaaaaagaaccagcagtgttgcctgctcgtcttcctgctttg
ttgttgaatggagcttctgggattgcggttggcatggcaacaaatattccccctcataat
cttggggagttggtagacgtgctttgcgctttaattcataatccagaagcaacgctgcaa
gaactgctggaatacatgcctgcacctgactttccaactggaggaataataatgggaaat
cttggggttttggatgcttaccgaactggccgagggcgtgttgtagttagaggaaaagct
gaagttgaattgttggatccaaagacaaagcggaatgcagttattatcacagagattcct
taccagacaaacaaagctacgcttgtccagaagattgccgaacttgttgaaaataagacg
ctagagggcataagtgacatacgtgacgagagtgatcgtaatgggatgcgtgtggttatt
gagctcaaacgaggaggggatcctgcacttgtgctaaataatctttaccggcatactgcc
cttcaatcaagcttcagctgcaacatggtgggtatctgcgatggagaacccaagctaatg
ggtttaaaagaactacttcaggcatttatagatttcagatgttctgttgtcgaaaggcgt
gcaaggttcaagctttcacatgcacaacaacgaaaacataatattgagggtattgtggtt
gggcttgacaatgtggacgaagtaatcaaactcatcaagaacgcctcaagtcattcctct
gctagtgctgctttacaaagtgagtatggtctttctgagaaacaagctgaggctatactg
gagataactcttcgaaggctaactactcttgagcggaaaaaggttactgatgagagtagt
tcactgacagagcaaattacaaagttggagcagctattatcaacccgagcaaatatccta
aagttaatcgaacaagaagcaatagagctgaaggacagattctcaagtcccaggcgttca
atgttggaggattctgacagtggtgatctagaagatatagatgttattccaaatgaagag
atgctgatggcaatcagcgaaaagggatatgtgaagaaaatgaaggccgatactttcaat
cttcagcatcgtggaacaattggcaaatctgttgggaaactgagagttgatgatgcaatg
tctgactttcttgtttgtcatgcacatgaccatgtcctcttcttcagcgaccggggtata
gtgtactcaacccgtgcgtataaaattccagaatgctctcgcaatgcagctggtactcct
ttggttcagatattatccatgtcagaaggtgaaagagtaacctccattgttcctgttagc
gagtttgctgaagatcgctacctcctgatgcttacagtgaatggctgcatcaagaaagta
tcgctgaaattattctcaggaatacgctcaactggaatcatagcaattcagttgaattct
ggtgatgaactgaaatgggttcgctgttgctcaagcgatgatcttgtggccatggcgtcc
caaaacggattggtcgtcttgagtacatgtgatggtgttcgtacactgagcagaaataca
aagggagtgactgccatgagactcaagaatgaggataagatagcgagcatggacatcata
cctgcatctctgcggaaagatatggaagagaagtcggaagatgcttcaattgtaaaacaa
tccaccggtccatggctattattcgtgtgtgagaatggttatggaaagcgtgttcctctg
agtagcttccggcgttcgcgtttgaacagagttggtttatctggatacaagtttgcggag
gatgatcgtttggctgctgttttcgtggttggttactccttggctgaggatggggaaagc
gatgagcaagtagttctggtgagccaaagcggaactgtgaaccggatcaaagtcagggat
atctcaatccaatcccgcagagcacggggagtgattcttatgcggctagatcatgccggc
aaaatccaatctgcttctctgatctctgcagcagatgaagaagaaacagaaggaactcca
actaatgaaaccttagaagccgttagcctgtaa
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integrated database retrieval system
