Arabidopsis lyrata (lyrate rockcress): 9319282
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Entry
9319282 CDS
T01578
Name
(RefSeq) LOW QUALITY PROTEIN: chaperone protein ClpB1
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
aly03110
]
9319282
Chaperones and folding catalysts [BR:
aly03110
]
Heat shock proteins
HSP100
9319282
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
Clp_N
AAA_22
Sigma54_activat
bpMoxR
AAA_16
T2SSE
NBD_SMAX1
Mg_chelatase
AAA_7
Zeta_toxin
Torsin
AAA_24
ABC_tran
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
9319282
NCBI-ProteinID:
XP_020885957
LinkDB
All DBs
Position
Unknown
AA seq
724 aa
AA seq
DB search
MDLEKLLSESQKLAQEECHSEVSPLHLAATLISDKNGIFFQAITKLGGEGAVSSIERELK
RALKQQIQSQPPTLSSDVAQKKGKKKKKKRILENSAVLLLRNGAKSVEDLILGLLEDRCI
MEALKETAVQPKMLMRVVKQLREPNFLALHTYGTDFVATSLLIDPVIGRETEIDNVIRVL
LKKNKNNPVLVGKTAVIEGLAQRIRLGNVPTPLQGIRIXGIRIFALAAGTRNRGDYEERL
LGVIKEVEEANGNVVMFFDEILLGAGGDGSNDAANMLKPMLARGSSRCIGATTIEEYQTY
IQRDAAFERRFQRVNVREPTISQTIEILRGLRDMYEKYHKVKIEDMALVFAAQLSSRYIT
DRYFPDKAIDVLDNACVNVRVTLEGSSVGPANISEAVSQMSGIPVSKIGRTEKENLIGLA
EKLHERVVGQDEAVNVVADSILRSRTGIGSPGKPIGSFLFLGPTGVGKTELAKAVAEILF
QGEKGLIRIDMTEYMEEHTVSRLIGAPPGYVGYEKGGQLTDAVRKRPYCVILLDEAEKAH
TAVFNTLLQVFDDGRLTDGQGQTVDFKNAVIIMTSNLGAEKLALALNSEISMSVARGRVM
EDVKRFFKPKLLNRLDGVVIFEPLSHKVRRKVAERQMKSLKDRLMQKGITLAWTDSTVDF
ILKKCHDPGNGARPIQRYIENMIVTHLSKMIVEDKIGENSWVCIDGSDASTELIYRVRDE
KMID
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggatttggaaaaactactttctgaatcacaaaagcttgcccaagaagaatgtcattca
gaagtcagtcctctgcatcttgcggccactttgatttcagataaaaatggaatttttttt
caagctatcactaagcttggaggggaaggtgctgtttcgtcaattgaaagggagcttaag
agagctttaaaacaacaaatacagtctcaacctcctacactctcttctgatgttgcacaa
aagaagggaaagaagaaaaagaagaaacgcattcttgaaaactctgctgtattgttgttg
agaaatggtgccaaaagtgtggaagatttgattttgggtcttcttgaagatagatgtatc
atggaagccttgaaagaaactgctgttcaaccgaaaatgttgatgcgtgtggtgaaacaa
ctccgggaaccaaattttctggccctgcacacatacggaacagactttgtggcgacatca
ctcctcatcgaccctgtcatcgggagagaaacagagatcgataacgtaatacgtgttctc
ttaaagaagaataaaaacaatcctgtattggttgggaaaactgctgtcattgaagggttg
gctcaaaggatacgcttaggaaatgttccaacacctctgcaaggtataagaatcnaaggt
ataagaatctttgcattagcagcggggactaggaatagaggtgattatgaagagaggctg
ctaggtgttataaaagaagtagaagaagctaatgggaatgtcgtcatgttttttgatgag
attctccttggtgccggtggtgacggttcaaatgatgctgcgaatatgctcaaacccatg
ctcgctagaggttcgtctcggtgcattggcgcaacaactattgaagaataccaaacctac
attcaacgagatgccgcatttgaaagaagattccagagagtaaacgtgcgggagcccact
atctctcaaactatcgaaatacttcgcgggctgagagacatgtacgagaaatatcacaaa
gtgaagatagaggatatggctctcgtgtttgccgcacaactctcttcccgatatatcaca
gatcgttattttccagacaaggctattgacgtgcttgacaatgcatgtgtgaatgttcga
gtgacactcgaagggagctctgttggaccggctaatatttctgaggcggtaagccaaatg
agtggaatcccggtttctaaaattggccgaaccgagaaagagaatcttataggcctggca
gaaaagctccacgagagagtggttggacaagatgaagcagtaaatgtggttgctgattcg
attctgagatcaaggaccggaataggaagtccagggaaaccgattggatcgtttcttttc
ctcgggcctactggagtaggcaaaacggagttggccaaggctgtggccgaaattctgttt
cagggggagaaaggactcatccgtatagatatgacagagtatatggaagaacacacggtt
tccagactcattggggcaccaccggggtatgttggctatgagaaaggtggacagcttaca
gatgctgtccgtaaaagaccgtactgtgtcatactcttggatgaggcagagaaagcccac
acagcagttttcaacacacttcttcaagtgtttgatgatggcagattaaccgacgggcaa
ggacagactgtggacttcaagaatgcagtgataattatgacatcaaatcttggtgcagag
aaactggccttagcccttaatagtgagatttcaatgtcagttgcccggggacgtgtgatg
gaagatgtcaaacggtttttcaaacctaaacttctgaataggctggacggtgtagtgatc
tttgagcctctctctcacaaggtgaggaggaaagtagctgagcgacaaatgaaatcactt
aaggaccggctcatgcaaaagggcatcactttggcatggacagattctactgtcgacttc
attttaaaaaagtgtcatgacccggggaatggggcgaggcccatccaaaggtacatcgag
aatatgattgtcacccatctctctaaaatgatcgttgaggataaaattggtgagaactca
tgggtatgcatcgatgggagtgacgcttcgactgaacttatctaccgagtgagagacgag
aagatgattgattag
DBGET
integrated database retrieval system
