Arabidopsis lyrata (lyrate rockcress): 9320353
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Entry
9320353 CDS
T01578
Name
(RefSeq) probable pectate lyase 7
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00040
Pentose and glucuronate interconversions
aly01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
9320353
Enzymes [BR:
aly01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
9320353
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
9320353
NCBI-ProteinID:
XP_002882189
UniProt:
D7LAH3
LinkDB
All DBs
Position
Unknown
AA seq
475 aa
AA seq
DB search
METARLFKLVCVFCIASLIPTIRANVADETDDYWVNKANEARKHTLMAYHPDPYEIVDHF
HERHYDNSTDVEGTEEEKAVASEEEDVIEMISSPTNSTRRSLTGRGKGKGKGKWSKLKGP
CTASNPIDKCWRCQPDWARRRKKLVHCVRGFGYRTTGGKRGRIYVVTSPRDDDMVNPRPG
TLRHAVIQKEPLWIIFKHDMSIRLNQELMIASHKTIDARGANVHIAYGAGITMQYVHNII
IHGLHIHHIVQSSGGMIRDSIDHFGQRGRADGDGISIFGATNIWLDHISMSKCQDGLIDA
IMGSTAITISNSHFTHHNDVMLLGAQDNNMDDKKMQVTVAYNHFGKGLVQRMPRIRWGFV
HVVNNDYTHWELYAIGGSQGPTILSHGNRFIAPPHKQHYREVTKRDYASESEWKNWNWRS
EKDVFMNNAYFRQSGNPHFKCSHSRQQMIKPKHGVAVSKLTKYAGALDCRVGKAC
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggagacagctaggcttttcaaattagtgtgtgtgttttgtattgccagtttgattccg
accatacgagccaatgttgctgatgagaccgatgattattgggtaaataaggccaatgaa
gctcgtaaacatacccttatggcttaccatcccgacccttatgagatcgtcgaccacttc
cacgagcgtcattacgacaactcgactgatgtcgaggggaccgaggaagagaaggcggtc
gcttccgaggaagaagacgtcattgagatgatttctagtccgacaaacagcacaaggcgg
agcctaaccggtaggggcaagggaaaaggaaaaggaaaatggagcaagctaaagggacct
tgcaccgcaagcaacccgattgataaatgctggcgttgccagcccgattgggccaggcgt
cgcaagaagctcgttcattgtgtccgtgggtttggttacaggaccacaggaggcaaacgc
ggccgtatatatgtggtcacgagccccagagacgatgatatggtgaaccctagacctgga
acactacgtcacgctgtgatccagaaagaacctctatggatcatttttaagcacgatatg
agcattaggttaaaccaagagctgatgattgctagtcacaagacaatcgatgctcgtggc
gctaacgtgcacatcgcatatggtgccggtattacgatgcagtatgtgcacaatatcatc
atccatgggcttcacatccaccacatcgtgcaaagcagtggtggtatgataagagattcg
attgaccactttgggcaaagaggacgggctgatggagatggtatctctatcttcggggca
acaaacatttggcttgaccacatttctatgtctaaatgccaagatggcctcatcgacgct
ataatgggttccaccgcaatcaccatctctaactctcatttcacccaccacaacgatgtg
atgttgcttggtgcacaagacaacaacatggatgacaagaagatgcaagtcacagtggct
tacaaccatttcggtaaaggacttgtccagaggatgcctaggatccgatggggtttcgtc
cacgttgtcaacaatgactacactcattgggagctttacgcgatcggtggtagccaaggt
cctaccattctcagccatggaaaccgtttcatcgctcctcctcacaaacaacactacaga
gaggtgacaaagagggattatgcttcagaaagtgaatggaaaaactggaactggagatcc
gagaaagatgtattcatgaacaatgcatatttcagacaatctggaaatcctcatttcaag
tgttcgcactctaggcaacagatgattaagcccaaacatggtgtggccgtttctaagctt
accaaatacgccggagcattggattgccgggtcggaaaagcatgctaa
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