Arabidopsis lyrata (lyrate rockcress): 9321408
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Entry
9321408 CDS
T01578
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aly03400
]
9321408
DNA repair and recombination proteins [BR:
aly03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
9321408
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
Motif
Other DBs
NCBI-GeneID:
9321408
NCBI-ProteinID:
XP_002883209
UniProt:
D7LA51
LinkDB
All DBs
Position
Unknown
AA seq
1118 aa
AA seq
DB search
MTTTTPEKTPARPLSIHDWDVLIDDFRDAGAPRDWFTSVFQIDSLVDFALSSLLKKDFPT
PVKLSILVFLDEFSPILFDKCGNDTFDRFIDVLRAIVQSPTDGSSGFKEQAMVSFTSVLV
SIDSFSVGHVEAVVDLLLALVNRPNHGFDRQARAIACECLRQLEKAFPGLLSDVAGHLWS
LCQAERTHAVQAYLLLFTTIVYNVVNQKLKVSLLSTSVPLVPFNAPNWMRDQSLIMSHGQ
GLGPDQKELRRTLAFMLESPYLFTSCAMMEFMGMVVPLASALELQASMLKVQFLGMIYSF
DPMLCHVVLLVYSQFPDAFEGQEKEIMRRLMLFSKETQIYLVFRLLALHWLMGLLNKLML
SGELEKRKSVLEMGQKFHPVVFDPLALKALKLDLLVQCSVSSNALSGGDNSKSAGDLLQD
CLVSVSDFKWLPSWSSETELAFRTLHKFLICASTHSDSDPSTTRSLMESSLFQNVQGLLV
DMTLEFQILVPVIVAFIERLIHCHKHQWLGERFLQTVDENLLPKLKKKNLLTAYFPLFHR
IAENDTIPPSRLIELLTKFVISLVEKRGFDVGLKLWDQGTEVLGICRTLMSHHKSSRLFL
GLSRLLSLTCLYFPDLEVRDNARIYLRMLVCIPGQRIKNILKPADAVSPSTHSSTFFSVQ
SPRFRHDPSKSRNLSSYIHLERVTPLLVKQSWSLSLPSLSVGTDGYSIIENKIQVDEVEP
DGSQELQILPEARRIESGKPTLRVMDSKIAEILERLRRYFSVIPDFKHMPGIKVRITCTL
RLDAEPYSSIWGSESQKIDLEKVDSPPAIFATVLKFSSSAPYGSIPSCRIPFLLGEPHWN
SNVPNEEVSLDIVLVENTLKEEEKDGLRGAPVTVELEPREPTPGLVEVSMEANAENGQMI
QGKLESVPVGIEDMFLKALAPVDEPEDTIPSYYSDLFNALWEVCGSSSSTAHETFALKGG
KTAAAVSGTRSVKLLEVPAEIVIQATELRLAPFVVAISGEQLVNIVRDGGIIENIVWKEE
EEEQGDRANADQSSSSSVGLNRGPLRLTYIGYGDDQEVPMTRSRGKMGKIKMLMFLPPRY
HLMFEMEVGEGSTLVHIRTDYWPCLAYVDDYLEALFLQ
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgacgacgccggagaagactccggcgagacctctctctatccatgattgggac
gttctcatcgacgacttccgagacgccggcgctcctcgcgactggttcacttccgttttc
cagattgattctctggtagacttcgctctctcgtctctcctcaagaaagactttcctacg
ccggtgaagctctcaatccttgtctttctcgacgaattttccccgattttgtttgataaa
tgtggtaacgacacctttgatcgcttcatcgatgttctccgtgcgattgtacaatctccg
actgatggatcttccggatttaaagagcaagctatggtctcttttacgtctgtgcttgta
tcgattgattctttctctgtaggtcacgttgaagcagttgttgatttacttcttgcgctc
gttaatcgtcctaaccacggctttgatcgacaagctcgtgctatcgcctgtgagtgttta
cgtcagcttgagaaagcatttcctggtttgctatctgatgtcgctggtcatctttggtcg
ttgtgtcaagcggagagaactcacgccgtgcaagcttatcttctcttgttcactacaatt
gtctacaatgtggttaatcagaagcttaaggtttcacttcttagtacctctgtaccattg
gtgccttttaatgctcctaattggatgcgtgatcagagtttgattatgagtcatggtcaa
gggttggggccagatcaaaaggaactgagacgaacattggcttttatgttggaatctccg
tatttgttcacgtcttgtgctatgatggaatttatgggtatggttgtgccacttgcgtcg
gcgttggagttacaggcctctatgttgaaagttcagttcttggggatgatttattcgttt
gatccaatgctttgtcatgttgtcttgcttgtgtattctcagttccctgatgcgtttgag
ggacaagagaaagagatcatgagacgtcttatgctcttttccaaggagactcagatctat
cttgttttccgcttgcttgcactgcactggttaatgggtttgttgaataagcttatgctg
agtggggagcttgagaagaggaaatctgttcttgagatgggtcagaagtttcatcctgta
gtttttgatccactcgctttgaaagcgttgaagcttgatctgctggtacaatgctctgtt
agttccaacgctttgagtggaggtgataacagtaagtctgctggagatctgttgcaggac
tgcttggtatcggtttcggatttcaaatggttgccttcatggagctcagaaactgaacta
gcattccgcactttacacaagtttctgatatgtgcatctacacattccgactctgaccct
tccaccactagaagccttatggagtctagcctcttccaaaacgtgcaggggttgctggta
gacatgactttggagtttcaaatcttggtccctgttattgtggcttttattgagcggttg
atacactgtcacaagcatcagtggttaggagagcggtttcttcagacagtcgatgagaat
ctgcttcccaaacttaagaaaaaaaacttattaacagcttacttcccgcttttccatcgg
atagccgagaatgatacaatacctccttctcgattgatagagctgcttacgaagtttgta
atttcacttgttgagaagcgcgggtttgatgtggggttgaaattgtgggatcaaggaact
gaagttcttggcatttgtcgaacactgatgagtcaccataagagctctagattatttctt
ggactttctcgccttctttccctcacatgtctctatttccctgatctggaggtccgagac
aatgctaggatatatctgaggatgctggtctgtataccaggacagagaattaagaacata
ttgaagcccgcagatgctgtctctccatcaacccattcttctacattctttagtgttcaa
agtcctcgttttcgtcatgatcctagtaaatctcggaacctttcatcctatattcatctt
gaacgggttacgcccctactcgtgaaacagtcatggtcattgtctctaccatctctaagt
gttggaactgatggatatagcattatagaaaacaaaatccaggtagatgaagttgagccg
gatggcagtcaagaacttcagattttgccagaagctcgaagaattgaatcaggaaaacct
acgttaagggtaatggactcaaagattgcagagattctagaaagattaagaagatatttc
tctgtgattcctgatttcaaacacatgcctggaattaaggttagaataacgtgtactttg
agattggatgctgaaccatatagcagtatatggggaagtgaaagtcagaaaatcgattta
gagaaagtcgactcacctcctgcgattttcgcgaccgtactcaaattctcatcttcagcc
ccgtatggctctattccctcatgccgcatacctttccttcttggtgagcctcattggaac
agcaatgtacccaatgaagaagtttctttagacatcgtcctggtagaaaacacactgaaa
gaggaggaaaaagatggcttgagaggagcacctgtaacagtggaactggaacctagagaa
cctacaccaggtttggtcgaggtttcaatggaagcaaatgcagagaatggtcagatgatt
cagggaaaactcgagagtgtccctgtgggtatcgaagacatgttcctaaaagctcttgct
ccagtggacgaacctgaagatacaataccgagctactactcagatctattcaatgctttg
tgggaagtgtgtggttcttcatccagcaccgcacacgaaacatttgcactaaaaggtggc
aaaacggctgcagcagtcagcgggactcggtcagtaaaactgcttgaagtccctgcggaa
attgtaatacaggccactgagcttcgcttagcgccctttgttgtggctatcagcggagaa
cagcttgtaaacattgtaagagacggaggaatcatcgagaacattgtgtggaaggaagag
gaagaagaacaaggggatcgcgcaaatgcggaccagtcttcttcatcctcggtgggatta
aaccgaggccctcttcgtctgacatacattggatatggagatgaccaagaggttccgatg
acgaggagcagagggaaaatgggaaagataaagatgctgatgtttcttcctccgagatat
catctgatgtttgaaatggaagttggtgaaggatcgacattggtgcatataagaacagat
tattggccttgcttagcttatgttgatgattacttagaagctttgtttttgcaatag
DBGET
integrated database retrieval system