Arabidopsis lyrata (lyrate rockcress): 9321674
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Entry
9321674 CDS
T01578
Name
(RefSeq) probable pectate lyase 9 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00040
Pentose and glucuronate interconversions
aly01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
9321674
Enzymes [BR:
aly01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
9321674
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Methyltransf_9
Motif
Other DBs
NCBI-GeneID:
9321674
NCBI-ProteinID:
XP_002885608
UniProt:
D7L467
LinkDB
All DBs
Position
Unknown
AA seq
450 aa
AA seq
DB search
MASQKLACLCFGVLLIFVVCVLTATNLRNKEISRSRKLKTEDSQSFNSSAMATRLDGVKL
NEHAVTDPDKVAHEVSKLIHMSEQNITARRKLGFFSCGNGNLIDDCWRCDRNWNKNRKHL
ADCGMGFGSKANGGRNGSYYVVTDPSDEDVVNPKPGTLRHAVIQVEPLWIIFKRDMVIKL
KQELIMNSFKTIDARGANVHIANGACITIQFITNVIIHGLHIHDCKRTGNVTVRSSPSHA
GFRGTADGDAINIFGSSHIWIDHNSLSHCTDGLVDVVMGSTAITISNNHFTHHDEVMLLG
HKDSYTQDKLMQVTVAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWKMYAVGGSANPTIN
SQGNRYAAPNNRSAKEVTKRLDTKTNEWMKWNWRSEKDLLVNGAFFTPSGEGASADYAQT
LSLPAKSASMVDSITASAGALGCRRGKPCY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctcagaaattggcttgtctttgcttcggtgtgcttctcatcttcgtcgtgtgt
gttctcacagccacgaatcttcggaacaaggaaatctctcgatcaaggaagctgaaaaca
gaggattcacagagctttaacagttccgcaatggcgactaggcttgatggtgtaaagttg
aatgaacacgcagttactgatccagacaaagttgctcatgaggtctctaagcttattcac
atgagtgaacagaacatcactgcaaggaggaagcttggattcttttcttgtggaaatggc
aatctaatagatgattgttggcgttgcgaccgcaactggaacaagaaccgtaaacacctc
gcggattgtgggatgggttttggaagtaaagctaatggtggtcgtaatggaagttactat
gtggtcactgacccgagtgatgaggacgttgtaaatccaaagccaggaactttacgccac
gccgtgatccaggttgagccattatggatcatctttaaaagagacatggtgataaagttg
aaacaagaactgatcatgaacagtttcaagaccattgatgctcgtggtgctaacgtccat
attgccaatggtgcttgcataacaatccagtttataaccaatgttatcattcatggcttg
cacattcacgattgcaagagaacggggaatgtaactgtcagaagctcgccaagtcacgcc
gggtttaggggaacggctgatggtgatgctattaatatatttgggtcaagtcatatttgg
atcgaccacaactctctctctcactgtactgatggtcttgttgatgttgtcatgggttct
actgccattaccatttccaataaccatttcactcaccacgatgaggtgatgttgctaggg
cacaaagactcgtacacacaagacaagctgatgcaagtgacagttgcgtacaaccatttt
ggagaggggcttatacagagaatgccaaggtgcaggcatggttatttccatgtggttaac
aacgattacacacactggaaaatgtatgctgttggaggaagtgcaaacccaactataaac
agtcaaggcaatagatatgctgctcccaataaccgctccgccaaggaggtgacaaaaaga
ttagacacaaaaacaaatgagtggatgaagtggaattggagatcagaaaaagaccttcta
gtgaatggagccttttttacaccatcaggggaaggagcatcagcagactatgcacaaact
ttaagcttaccggctaaatcagcctcaatggtggactcaatcactgctagtgcaggtgca
cttggttgccgcagaggcaaaccttgctactag
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