KEGG   Arabidopsis lyrata (lyrate rockcress): 9323225
Entry
9323225           CDS       T01578                                 
Name
(RefSeq) adagio protein 3
  KO
K12116  flavin-binding kelch repeat F-box protein 1
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:aly00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    9323225
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:aly04121]
    9323225
Ubiquitin system [BR:aly04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     9323225
SSDB
Motif
Pfam: Kelch_KLHDC2_KLHL20_DRC7 Kelch_4 Kelch_3 Beta-prop_ATRN-LZTR1 Kelch_2 Kelch_5 PAS_9 Kelch_1 Kelch_6 NANM PAS_3 PAS F-box-like F-box PAS_4
Other DBs
NCBI-GeneID: 9323225
NCBI-ProteinID: XP_020865970
LinkDB
Position
Unknown
AA seq 623 aa
MARKHATESIGEVTGKRKKRDRVEEEGDIYDGIENQDVVEDGKLPLEVGMVYYPVTPPSF
IVSDALEPDFPLIYVNKVFEVFTGYHADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEI
RRCLEEGIEFQGELLNFRKDGTPLVNRLRLALIRDDDGTVTHVIGIQVFSETTIDLDRVS
YPVFKHKQQLDQTSECLLPGGSPRFKEHHEDFCGILQMSDEVLAHNILSRLTPRDVASIG
SACRRLRQLTKNESVRKMVCQNAWGKEITGTLEIMTKKLGWGRLARELTTLEAVCWRKFT
VGGIVQPSRCNFSACAVGNRLVLFGGEGVNMQPLDDTFVLNLDAEYPEWQRVRVTSSPPG
RWGHTLSCLNGSWLVVFGGCGRQGLLNDVFVLDLDAKHPTWKEVAGGTPPLPRSWHSSCT
IEGSKLVVSGGCTDAGVLLSDTFLLDLTTDKPTWKEIPTSWAPPSRLGHSLSVFGRTKIL
MFGGLANSGHLKLRSGEAYTIDLEDEEPRWRELECSSFTGAVVPPPRLDHVAVSMPCGRV
IIFGGSIAGLHSPSQLFLIDPAEEKPSWRILNVPGKPPKLAWGHSTCVVGGTRVLVLGGH
TGEEWILNELHELCLASRQDSDL
NT seq 1872 nt   +upstreamnt  +downstreamnt
atggcgagaaagcatgcgactgaatcgatcggagaagtcaccggaaaacgaaaaaaacgc
gacagagttgaagaagaaggagacatctatgatggaatcgaaaatcaagatgtagtagaa
gatgggaagcttccattggaagtggggatggtctattacccagtgactcctccttcgttt
attgtatccgatgctctggagccagattttcctttgatctatgttaacaaagtcttcgaa
gtcttcactggttatcatgccgatgaagttcttggtcgtaactgtcgatttctacagtac
agagatcctcgagctcaaaggcgtcacccattggttgatcctgtggttgtatctgagatt
aggagatgtcttgaagaaggtattgaatttcaaggagagcttcttaatttcagaaaggac
ggtactccgttggttaacagactacgacttgctctaatacgtgacgatgatggaacggtt
acacatgtaattgggatacaggtcttctctgaaacgactatagaccttgaccgtgtttca
tatcctgtgttcaaacataaacaacagcttgatcagacatctgagtgcttgcttccaggt
ggaagcccgaggtttaaggagcatcatgaagatttctgtgggatattgcagatgtctgat
gaagttttggcgcataacatcttatctcggttaactccaagggacgttgcttcaattggt
tctgcctgcaggaggttgaggcagttgacgaaaaacgagagcgtgaggaagatggtgtgt
cagaatgcgtggggaaaagagataactggaacactggagattatgactaagaagctagga
tggggtcggttagctagagagctcaccactcttgaagctgtctgttggcgcaaatttact
gttggagggattgtacaaccttcccgctgcaatttcagcgcatgtgctgttgggaaccgg
cttgtgctatttggtggggaaggggttaacatgcagccactggatgatacttttgttctc
aatcttgatgcagagtatcctgagtggcagcgtgtgagagtgacttcgtcgcctccagga
cgttggggacacactctctcgtgtctcaacgggtcgtggttggtagtctttggagggtgt
ggaagacaaggattgcttaatgacgtatttgtgcttgatctagacgctaagcatcccaca
tggaaggaagtagcaggaggaactcctccattgcccagatcttggcacagctcgtgcacc
attgaaggctctaaactggttgtctcaggtggctgcacagacgctggggtgcttctcagt
gacaccttcttgttggatctgacaacagataaaccgacatggaaagaaatcccaacatca
tgggctcctccttctagacttgggcattctctatctgtctttggtcggactaaaatccta
atgtttggtgggcttgcaaatagcggtcatctaaagttaaggtcaggggaggcatacact
atagacttggaggatgaagaaccaagatggagagagcttgagtgtagctcgttcacaggc
gcagttgtaccgcctccaagactggaccacgtggctgtgagcatgccatgcggtagggtc
atcatctttggagggtctattgcagggcttcactctccttcacaactgttccttatagat
cctgcagaagagaaaccgtcatggaggatcctgaatgtcccagggaaaccacccaagtta
gcttggggacatagcacatgcgttgttggaggaactagagtattggtccttggtggtcac
actggtgaggaatggatactcaatgaattacatgaactctgcttggctagccgccaagac
tcggatctgtaa

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