KEGG   Arabidopsis lyrata (lyrate rockcress): 9325357
Entry
9325357           CDS       T01578                                 
Name
(RefSeq) DNA-repair protein XRCC1 isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    9325357
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aly03400]
    9325357
DNA repair and recombination proteins [BR:aly03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     9325357
SSDB
Motif
Pfam: BRCT PTCB-BRCT BRCT_2 RTT107_BRCT_5
Other DBs
NCBI-GeneID: 9325357
NCBI-ProteinID: XP_002887830
UniProt: D7KX60
LinkDB
Position
Unknown
AA seq 356 aa
MSHKRNLPSWMSSRDPQTSPGKSHCKKPKDEEHNSRNAPSNKSEHAEPSSSTTEFSKLME
GVVFVLSGLVNPERSTLRSQALTMGATYQPDWNSDSTLLICAFPNTPKFRQVETNGGTIV
SKDWITECYTQKKLVDIEQYLMHAGKPWRKSNVRQNAIQENSEHRSKKPEKQVEKKTETR
GTPSTSSKNRSACNLVKEPFSVTEVKKWARDDLTQTISWLESQEEKPEPAEIKRIAAEGV
LTCLQDAIESLEQKQDIGSVTELWSFVPRVVKELGKIESSSKKENSTASKEELCKQAKSW
KKMYEVELANTSEAESSRTKSRETSRVAGGYDSDETVEMTEEEIELAYRNVSLECL
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgtcccataagcgaaatcttccttcttggatgagttcaagggatcctcaaactagtccg
ggtaagtctcattgtaagaagcctaaggatgaagagcacaacagcagaaatgccccttcc
aacaagtcagaacacgctgagccaagttcaagtaccacggaattctctaaacttatggaa
ggagttgtttttgtgctgtcgggtcttgttaatcctgagaggagtacactgaggtcacag
gccttgacaatgggagccacctatcaacctgactggaactctgactctaccttgttgatc
tgtgcttttcccaacactccaaagttccgtcaagttgaaacaaatgggggaacaatagtc
tcaaaggactggataactgagtgttatacgcagaagaagttggtggatattgagcaatac
cttatgcatgctggaaaaccatggaggaaaagcaatgttcgtcaaaatgctattcaagaa
aatagtgaacaccggtctaaaaaaccagagaagcaagtagagaaaaaaacagaaacaagg
ggaactccatctacctcatccaagaatagatcagcttgcaatcttgtgaaagagccattt
tctgttacagaggtgaagaaatgggccagggatgacctaactcaaaccatctcatggctt
gagagtcaggaggagaagccagaaccagccgaaatcaagcgaatagctgctgaaggagtc
ttaacctgcttacaagacgccatagagtctcttgaacagaagcaggacattggatcagtt
acagagctatggagctttgtccctcgtgtagtgaaggagcttggaaagatcgaatcgtct
tctaaaaaagagaattcaacagcttcaaaggaagaactttgcaaacaagccaagtcttgg
aaaaagatgtatgaggttgagctagcaaacacgagcgaagctgaatcatcgagaacaaaa
agcagagagacctctcgggttgccggtggctatgacagtgatgagaccgttgagatgact
gaagaagagatcgaacttgcttataggaatgtttctttagagtgtctttag

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