Arabidopsis lyrata (lyrate rockcress): 9329069
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Entry
9329069 CDS
T01578
Name
(RefSeq) LOW QUALITY PROTEIN: chaperone protein ClpB1
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
aly03110
]
9329069
Chaperones and folding catalysts [BR:
aly03110
]
Heat shock proteins
HSP100
9329069
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
AAA_5
AAA_22
AAA_16
Sigma54_activat
AAA_14
ClpB_D2-small
AAA_7
ATPase_2
nSTAND3
bpMoxR
IstB_IS21
RuvB_N
AAA_28
NACHT
ResIII
AAA_18
TsaE
DUF815
RNA_helicase
AAA_30
Mg_chelatase
Spectrin_Anc-1
DNA_pol3_delta2
HerA_C
T2SSE
DUF87
Torsin
LXG
NBD_SMAX1
AAA_13
FAN1_HTH
Motif
Other DBs
NCBI-GeneID:
9329069
NCBI-ProteinID:
XP_020869770
LinkDB
All DBs
Position
Unknown
AA seq
655 aa
AA seq
DB search
MYRASYHDGLKTYGRDLIKQAEKLEXRDKEIKRVVRILSRRTKNNPILIGEAGVGKTAVV
EGLAQRIFNGDVPNFLTDVTLVALDMCALAAGASYPGQFEERLKDVLEEVKEAQGKIVLF
IDEIHMVLGAGGAIEAANFFKPMLARGQLRCIGATTRDEYSTYLEKDAAFERRFQQVYVA
EPSVPETINIILRGLKEKYELHHGVSIQDTALVVSAQLSARYITGRKLPDKAIDLVDEAC
AYVRVQLDSQPEEIDDFERKRMQLKIELHALEKDKDKASVARLVKVQKELDDLRDKLQPL
TLRYQNEKKIIDEIRKLKQKREELMSALKEAERQHKLPRAADLRYGEIQQVESGLAKLEE
SSKENLMLTETVGPDNIAEIVSQWTGIPVTKLDQNDKEKLNSLADRLHQRVVGQDQAVDA
VADAILRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRLDMSEYME
KYSITRLIGASPGYIGYEEGGQLTEAVRNRPYCVVLFDEVEKAHVSIFNILLQVLDEGRL
TDSQGRTVDFKNSMIIMTANIGADHLISGLTGEVTMQVAQDRVMKAVRKHFRPELLNRLD
EIVVFDPLSHENLRKVAQLQMKNVVIRLAEKGIALDVTNDALDYILEASYNPVNL
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgtatagggcttcatatcatgatggtttgaaaacttatgggagagatttgattaaacaa
gcagagaaacttgaangcagagacaaggagataaaaagagtagttaggattctgtcaagg
agaacgaagaacaatcctattctaatcggagaagcaggggttggcaaaactgctgtggtg
gaaggtttggctcaaaggatatttaacggagacgtgccgaattttcttactgatgtaaca
ctcgttgccttggacatgtgtgcactggctgctggtgcatcctacccaggacaattcgaa
gaaagattgaaagatgtgttggaagaggttaaggaagctcaaggcaaaattgttctcttt
atcgatgagatccacatggttcttggtgctggcggggccatagaggctgccaatttcttt
aagcctatgttagctagaggccagcttcgttgcattggggctactacgcgtgacgaatac
tcaacatatcttgagaaagatgctgcgtttgagagaaggttccagcaagtctatgtagct
gagccaagtgtgcctgagactatcaatataattcttagagggcttaaagagaaatatgaa
ttacatcatggtgtctctatccaagacacagctcttgttgtttctgctcagttgtctgct
cgttacattactggtcgaaaattaccggataaggctattgatttggttgatgaggcttgt
gcatatgtaagagtccagcttgatagtcaacctgaagaaattgatgactttgaaagaaag
agaatgcagctaaagatagaacttcatgccctcgaaaaggataaggacaaagccagtgta
gctcgtcttgtgaaggtgcagaaagagcttgatgacttgagggacaagcttcagcctctt
acattgagataccaaaatgagaagaagataattgatgagattcgcaagcttaaacagaaa
cgggaagagctcatgtctgctctaaaggaggctgagaggcaacataagctccctagagct
gctgatctaagatatggggaaattcaacaagtggaatctggactagcaaaactagaagag
agttctaaagagaacctaatgcttacggaaactgttgggccggataacattgctgagata
gtgagccaatggactgggattccagtgactaaacttgaccagaacgacaaggagaagcta
aattctcttgctgataggttacaccagagggttgttggacaagaccaagcggtggacgct
gtggctgatgcaattttaaggtcgagggctggacttggacgtccacaacaacccactggt
tccttcctcttcctcggtccaactggtgttggcaaaactgagctagctaaggctctcgct
gagcaactctttgacgatgaaaaccttttggttaggcttgatatgtcagagtatatggaa
aaatactcgattactcgactcattggagcatcacctgggtacattggttatgaggaaggt
ggacaattaactgaagctgtgaggaaccgaccttattgcgttgtactatttgatgaagtt
gaaaaggcccatgtttctatattcaacatactacttcaagtgctagacgaaggaagatta
acagactcgcaagggaggacagtcgatttcaaaaactcaatgataataatgactgcaaac
attggtgctgaccaccttatctcaggccttacaggtgaagtgacaatgcaagtggctcaa
gaccgcgtgatgaaagctgtgagaaagcattttaggccagagctactaaacagattggat
gagatagtggtgtttgatcctctgtcgcatgagaatttgagaaaagtggctcagctccaa
atgaagaatgttgttatcaggctagctgagaaaggtatagctttggatgtcacaaatgat
gcattggactacattttagaagctagttacaacccggtaaacctctga
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integrated database retrieval system
