Alteromonas mediterranea U7: I876_16140
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Entry
I876_16140 CDS
T02721
Name
(GenBank) poly(beta-D-mannuronate) lyase
KO
K01729
poly(beta-D-mannuronate) lyase [EC:
4.2.2.3
]
Organism
amae
Alteromonas mediterranea U7
Pathway
amae00051
Fructose and mannose metabolism
amae01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
amae00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
I876_16140
Enzymes [BR:
amae01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.3 mannuronate-specific alginate lyase
I876_16140
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Gene cluster
GFIT
Motif
Pfam:
Chondroitinas_B
Beta_helix
DUF4957
Motif
Other DBs
NCBI-ProteinID:
AGP91068
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Position
complement(3668500..3670719)
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AA seq
739 aa
AA seq
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MKLKSTFKSAVGVVTLLALNSTVNAEDFYVDSKASYYDAVSQVGPGDDIVFKNGTYRDFE
IKFQAQGSKQAPVTLRAETKGEVVFSGQSNLAIAGSHVVVSGLVFKNGYSPSGSVISFRV
NRDDVANHTRVTEVVIEDYSKPDKFESDYWVALYGKHNRFDHSYLAGKRNRGVTVAVRLD
SADSTENYHQIDNNYFGYRPELGSNGGETLRIGTSHYSLENSFTRVENNVFDRCNGEVEI
ISVKSGGNTLHGNTFIESRGTLTLRHGNKNTITNNVFLGNGVPNTGGVRVINADQEVANN
IFKGLTGYRFGSGFTVMNGVPNSPQNRYHQVKNANIHHNTFIDVSHIQLAAGADEERSAP
PVDSVFTKNLVVANRVPTTFSFFDDISGITFSNNIANYSVESQIEAGFTKRTDIGESTNV
TVDGMQVGADDSVKALSKDEVGPSWYQKKEYELPFKSGKEIRVEPGVNTIFDAVTQAEDG
DVLVLGEGKYSEEKIIKVEKVLSIEGASPDLVTILPQRSALFEISDNGALALQRVTLAGT
DAPDAAGNTLIRTKKWGMLTNYRFNMDNVKVVDVDINHSFHFFSAGARSFATHFSVTNSH
FETISGNVFAFNKEKDDLGIYNVEVLNISNNVFENVSGALALIYRGGTDESTFGPKVTLS
DNTLTKVGHGKRNKRKASIFLHGVQKTNIRNNKFDSSAKVRIEHTVGEPQTTLSQNSFSN
TDKPSIIDFLTAKDGCQCQ
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgaagttaaagagtacttttaagtcagcggtcggcgttgttactttgttggcgctaaac
tcgactgttaacgctgaagacttttacgtagattctaaagcatcctattacgatgctgtt
agccaggtaggtccgggagacgatattgtttttaaaaacggaacgtatcgcgatttcgaa
attaagtttcaggcccaaggcagcaaacaagcccctgttactttgcgtgctgaaacaaaa
ggcgaggtggttttttctggtcaatctaacttagcaattgctggaagccacgtggtggta
tcagggttagtatttaaaaatggttattcgccttcaggctcggtcattagctttcgagta
aatagagatgatgtggcaaaccatacccgcgttaccgaagtggttattgaagactattca
aaacccgataaatttgagagtgactattgggttgcgctttatggaaaacacaatcgcttc
gatcactcctatcttgctggtaagcgcaatcgtggcgttaccgttgctgtgcgactagat
agtgcggatagcactgaaaattaccaccaaattgacaataactactttggctaccgacct
gaactgggctcaaatggcggggaaacactaagaattggcacaagtcattattcattagaa
aactcgttcactcgcgttgagaacaatgtatttgatagatgtaatggcgaagtagagatt
attagtgttaagtcgggtgggaacacccttcatggcaacacctttatcgagtcaagaggg
acgctaaccttacggcacggtaataagaacacgatcaccaacaacgtctttctaggtaat
ggtgtccctaacactggcggagtgcgggttatcaatgctgaccaagaagttgctaacaat
atctttaaagggctaacgggctaccggtttggtagtggattcacggtaatgaacggggtg
cctaactcaccacagaaccgttatcatcaggtgaaaaatgcaaacattcaccacaacacc
tttattgatgtttctcacatacagctagccgctggcgcagatgaagaacgttcagcgccc
ccagtagacagcgtatttacgaaaaaccttgttgttgctaacagggttcccactacattc
agcttcttcgatgatattagcggtataacattttcgaacaatattgctaattacagcgtt
gaaagtcagattgaagcgggttttaccaagcgcactgatattggtgaatcaacaaatgtg
actgttgacggtatgcaagtaggtgcagacgatagcgtaaaagcattatcaaaagatgag
gtaggcccaagctggtatcaaaagaaagaatatgaattgccatttaaatcgggtaaagaa
ataagggtagagcccggtgtaaacactattttcgacgcggtcacccaggccgaagatgga
gatgtgcttgtcttaggtgaaggcaaatacagcgaagaaaaaatcattaaggttgaaaag
gtattgtctatagaaggggcttcacctgacttggttacgattttaccccaacgctctgca
ttattcgaaattagcgacaatggggctttagcgcttcaaagggtaaccttagcgggcaca
gatgcgcctgatgcggcaggcaatacactaattcgtaccaaaaaatggggcatgttaacg
aactaccgcttcaacatggataacgtgaaagtggtcgatgtagacattaatcatagtttt
catttcttctctgctggtgcgcgaagctttgccacgcatttttctgtgacgaacagccat
tttgaaacaatttctggaaacgtatttgcgttcaataaagaaaaagatgacttgggtatc
tacaacgttgaagtactcaacattagcaataatgtttttgaaaacgtgagcggagcacta
gccttgatttatcgtggggggacggatgagagtacattcgggcccaaagtaacgttgagt
gataatacgctgaccaaggtgggtcacggcaaaagaaataagcgcaaagcaagcatcttc
cttcatggcgtccaaaaaacaaacattcgaaataataagttcgactctagtgcgaaggta
cgcattgaacacacggtcggtgagccacaaacgacgctcagccaaaatagctttagtaac
accgataagccgtcaattatagattttctaacggctaaagacggctgccagtgtcagtaa
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