Alteromonas mediterranea MED64: I533_19290
Help
Entry
I533_19290 CDS
T02958
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
amag
Alteromonas mediterranea MED64
Brite
KEGG Orthology (KO) [BR:
amag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amag03016
]
I533_19290 (trmE)
Transfer RNA biogenesis [BR:
amag03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
I533_19290 (trmE)
Prokaryotic type
Methyltransferases
I533_19290 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
Dynamin_N
Ras
AIG1
SRPRB
Arf
ABC_tran
Gtr1_RagA
Roc
AAA_18
DUF5129
AAA_28
MMR_HSR1_Xtn
GCV_T
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AGP83807
LinkDB
All DBs
Position
complement(4392576..4393964)
Genome browser
AA seq
462 aa
AA seq
DB search
MESLTLSTDTITAQATAPGRGGVGIVRVSGPKAKDIAEALVPSELTPRLATYTPFVDANK
SVIDQGIALFFKGPNSFTGEDVLELQGHGGQVVMDMLIDAVLATGHARLASPGEFSEQAF
LNDKLDLAQAEAIADLIDASSKQAARSALRSLQGEFSTQIQTLSDQIVHLRMYVEAAIDF
PEEEIDFLSDGKVSGDLSTIMQSLTKVRDQAKQGTLLREGMQVVIAGRPNAGKSSLLNAL
AGRDSAIVTDIAGTTRDVLKEHIHIDGMPVHIIDTAGLRESPDKVEQIGIERAWQAINEA
DHVLFVVDSTATSVIDPYEIWPEFMARLPQGIPVTVVRNKADLSTLSIGQSSVNTQQGDI
SVINLSAKEGSGVDTLKAHLAKTMGFDTTTEGQFIARRRHIDALDQAYSYVSTGEQQLHD
AMAGELLAEELRLAHQALCEITGEFTSDDLLGKIFSSFCIGK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggaatcactcaccctttctaccgacaccattaccgcacaagctacggcccctggccgt
ggcggcgtaggtattgtgcgtgtatctggacccaaagcaaaagacattgctgaagcgtta
gtaccaagtgagcttacaccccgccttgcaacctatacaccctttgttgacgccaacaaa
agcgtaatagaccaaggtatcgcgctattttttaaaggcccgaattcgtttaccggtgag
gatgtgcttgaactacaaggtcacggcggtcaggttgttatggatatgcttatagacgcc
gtacttgctaccgggcacgccaggttggccagccctggcgagtttagcgaacaagccttt
ttaaatgacaagctcgaccttgcacaagcagaggccatagcagatttaattgatgctagc
tctaagcaagccgcacgtagcgctttacgttcgctacagggtgagttttccacacaaatt
caaacgttgtcagaccaaatcgtacaccttcgtatgtacgttgaggcagccatcgacttt
ccagaagaagaaatcgacttcttatcagatggaaaagtatcaggtgacttaagtactatc
atgcaaagtctgactaaagtacgtgaccaggcgaaacaaggtaccttgctgcgcgaaggg
atgcaggtggttattgcaggtcgtccaaatgcgggtaaatcgagcttgctaaatgccctc
gctggccgcgacagtgcaatcgtaaccgacatagcaggtaccacacgagatgtgcttaaa
gagcacatacatattgacggaatgccggttcacataattgataccgcaggtcttcgtgaa
agccctgataaagtagaacaaataggtatcgaacgagcgtggcaagctatcaatgaggca
gatcatgttttatttgttgtagattccactgcaacaagcgttattgacccttatgaaata
tggcctgaatttatggctcgcctgccacaaggcatacctgttacggtagtacgcaataaa
gctgatctgagtacattgagtattggacaaagcagcgttaatacccagcagggggatatt
tcggtaattaacctctctgcaaaagaaggcagcggcgtagacacacttaaagcacatttg
gccaaaaccatgggcttcgacacaacgaccgaaggccagtttattgcccgtcgacgtcat
attgatgcacttgatcaagcctacagctatgtgagcaccggcgagcaacaattgcatgat
gcaatggcaggcgagctgctagcggaagaattgaggttggcccatcaggcactctgtgag
ataaccggtgaatttacctcagacgatctgcttggcaaaatattttcatcattctgtatt
ggcaagtaa
DBGET
integrated database retrieval system
