Alteromonas mediterranea U4: I607_16635
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Entry
I607_16635 CDS
T02720
Name
(GenBank) LysR family transcriptional regulator
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
amal
Alteromonas mediterranea U4
Brite
KEGG Orthology (KO) [BR:
amal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amal03000
]
I607_16635
Transcription factors [BR:
amal03000
]
Prokaryotic type
Helix-turn-helix
LysR family
I607_16635
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Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
HTH_28
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AGP87101
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Position
3761987..3762877
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AA seq
296 aa
AA seq
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MHHLNYHHLYYFYLVAGEGSIAKAAKLLHVTPQTVSGQLSTFENQLGYALFDRINKRLYL
NARGKVTYQYASEIFHKGNQLAEILNNSDEVNTKEFVIGITNGIPKVLFYDFVHDTMRRF
SHVKYVIKEDSFDGLLKELAINAIDFIVADRGIAPGTQISANSFFLGESSLSFFAKSPLS
EEQTFPDCLNQMPLLIQGNTSGIRQALTSWLETEQLYPKIVAEFDDTALLKLFGSEDFGV
FCAPSAISKHVEEQYGVHCIGNANTLNERYYAITGKSRADYTISEAIVESAREILA
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgcatcacctaaactaccatcatttatactatttttatctggtcgccggcgaaggcagt
attgctaaggcagccaagttacttcacgttactcctcaaacggttagcgggcaacttagt
accttcgaaaaccagcttggctatgccctattcgacagaataaacaagcggctatacctc
aacgcgagaggtaaagttacctatcagtatgccagtgaaatatttcataaaggtaatcaa
ctggctgaaatacttaacaatagcgatgaagtgaatacgaaagaattcgtaataggtatt
acaaacggtattccaaaagtacttttttacgattttgttcacgacaccatgcgtcggttt
tctcatgtgaagtatgtaattaaagaagacagcttcgatggattactgaaagagctggcc
attaacgctatcgactttattgttgcagaccgcggcatagcgccaggtacgcaaattagc
gccaatagctttttcttaggtgaaagctcgttgagcttttttgcgaaatcaccacttagt
gaagaacaaacctttcctgattgtttaaatcagatgccgttacttattcaaggcaacacg
tcggggatacgacaagcattaaccagctggcttgaaaccgaacagctttacccaaaaatt
gtggccgagttcgatgataccgccttattgaagctatttggcagcgaagactttggcgtg
ttctgcgcaccatcggctatttcgaaacacgttgaagagcaatatggtgtgcattgtatt
ggtaacgcgaatacgctcaacgaacgatactacgctattacaggtaaaagccgtgctgac
tatacgattagtgaggcgattgttgaatcggccagggagattctagcgtga
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