Anopheles maculipalpis: 126563732
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Entry
126563732 CDS
T10890
Name
(RefSeq) CCR4-NOT transcription complex subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
amap Anopheles maculipalpis
Pathway
amap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126563732
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amap03019
]
126563732
Messenger RNA biogenesis [BR:
amap03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126563732
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
126563732
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
CNOT1_HEAT
DUF3819
CNOT1_1st
BEN
Motif
Other DBs
NCBI-GeneID:
126563732
NCBI-ProteinID:
XP_050076376
LinkDB
All DBs
Position
3RL:complement(39983716..39995248)
Genome browser
AA seq
2477 aa
AA seq
DB search
MNQEPFTYALSQISHLVSNVNKKNTAATVRQLAQLVKDFGLEADRHLLRCLFSSIDFGDA
SHSASRGYCQARLLATELASLTNKPQLVANICFAVDNPFPQQKSLKPSPNLLTQISKTLS
CTPIQETALSVALLNSANPDIVRVAEAHLKICLRGLIENYVESDSGSNVEGSLNDVSPEF
LQQILSLISYGKHTTYGLTEQTYERFRHQLCRDFPRVRVPLILAPLLYAENSEISAEILK
INTHSILQSSIMKTSWTNLVVEVGYSFTATLDDCRNHLLKVGGREITPQDVAKIVSSMCL
THETLSESNINLPTPSAFWPQGSDPSGQKSKDGNGGSSASENTTWKPEVLVQALKEVVPN
LNWKEVCLALDHPEFMLKDRAGLSLLLTIVKMGMQSSNIGQNFPVECLYQRWTNVEGQLS
IISQILKNPDLYSFADHIYTSVSLELLKTPPETDNKEVASWMSLHLVDVLLYIADHANLS
EKVMKIFKVPGSLCPDILFLALLQINPPMTTARQELFTYLVPIFLSNHPNAGTILHHAWN
HSTFNLTLRPIILHAMSDWYMVGEGDQSRLSRILDVAQDLKALSNLLNIRTYMFIIDLAC
LASRREYLKLEKWLADKIRDHGEPFVKTILKFLQRRCPQIMGGKYSEEQIPKSAQLPPET
LSTILNCLQACIGNCTPEVAEMIHNMTQYGILLNSKTRAQQQQQQQQQQQQQAPQQQPPP
PGVLRSHRGLEAFGAANAMGSQLLPPMVDSLNSLTANIGGLSIGGPGGGNSAFSFNNIIA
TPASPSRLLPSSSPFPMIPLPAAAAAAHASTLGRLQQTPNDKLVGGAGGGGGGAGGIPNA
AITQSPFQADAAQPVSKEVEDEANSYFQRIYNLPPHPTLSIDEVLDMLQRYKDSPNRHEN
DVYQCMLRNLFEEYKFFPQYPDKELQTTAQLFGGMVERNLVTTYVALGLALRCVLDALKK
QEGTKMYYFGITALDRFKNKLHLYPKYCEYVRSIPHFSEFPAHLIDYIDYGVQGLEPPNK
TLGPGPLPPPILQFIPSGAAGRGPAVGNPLYRSNSVTGTSNLTLAGSTSASAAAAAAATV
AGGGAGSSAGTPGKINLPAQLVAPGGGASAGGNVGGSSTGGTVGSGTGGQPPRVKSIANA
TNIDTLLVATQDREEKIISPPDAIQDKTAFIFNNLSQINLQQKCEEIKEILQKDYYTWLA
QYLVLKRASIEVNFHVLYSNFLDALKINEINKLVTKETFRNIRVLLRSDKGIANFSDRSL
LKNLGHWLGMMTLGRNKPILHLDIDVKSLLVEAYNKGQQELLYVVPFVAKVLESCAKSKV
FKPPNPWTMAIMNILAELHQEPELKLNLKFEIEVLCKNLNIDVSDLKPAIYLKDPERAQN
IEYQLSQPKPPKEAQPVMGGGAGVSGIGVPGNAGGVVAVVSQLPPGPDEMGSSGPSSSPA
NVAMDPALAATGPPEPRFHYSDINIANPSCIAQHIIYHPTLTILHTHSHLKVIVKTSLER
TITEWISLIVDRSVKIASKTTEQIIRKDFALDADETRMRRAAHNMARSLVAGMAMITCRD
QMLQSIQNNIKAGFANAATHAQKDIVEGAATQLAVDNIELVSAFIQKTAIEKVAIEMDKI
LAEDFQLRKIARQEGRRYWDANVLSYQAERMPERIRLNVGGVSPSQLAVYEEFSRNIPGF
LPITERDAAQFAPKMTELMPFVATPDEIGAMFDELASKMDAFIKTTRIIPILQLHTNNME
QLLEYLIHAHRSLDNLTGCTLLNKAVEGLLEGLVNIPDQLEHIKLYRDIHLRVMRLMQDN
RLFGPLWTNKAITRYMLECREELRYNVEAVDMLISSNFVNMQQFDIMLVQLMDNGNNYVA
VVFAMQLLQTFFIDERHNSFIIENELAGTIEMLHRLTAHPRAPEGLTHLIEMLRANHDAN
SFLMDRAVAGPTSYIHAGLAQARLEIDDSPGFLERAEFLLKDWVTIALSPNTCRDPLKGF
SVFVGKMNAHGILKGDEPLTRFFRFATQYCIDLTYRNMNEPSAKAKIFQFIDAYVRLIAL
LVKHSGESGNTSTKLNLLNKILGIVLGLLLQDQEIRSTAFQQVGYHRIFAMLFAELSTQD
PILENISINVITAFCHIFHMLRPSIAPVFCYSWLELIAHRVFIGRVLALIPQQKGWQMYS
QLLIDLFKYLAPFLRNAELAKPVQHLYKGTLRVLLVLLHDFPEFLCDYHFAFCDVIPSNC
IQMRNLILSPYPRNMRLPDPFTPNLKVDMLNDIGGSPRISINYVSSIQPPSFKKDLDSYL
KARAPVTFLSELRSNLQISNEVGSRYNIPLMNALVLYVGTQAIGHIRSKNLGPTMSTIIH
SAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSHTHYFSCCILYLFVEANSEAIQEQI
TRVLLERLIVNRPHPWGLLITFIELIKNPIYKFWEHDFVHCAPEIERLFESVAKSCMVTS
KSQQQIQNVEPDITECS
NT seq
7434 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagagcctttcacatacgccttatcgcagatcagtcacttagtgtcgaacgtg
aataaaaagaacaccgcggccacagttcgtcagttggcgcagttagtgaaggacttcgga
cttgaagccgaccgtcacttgctgcgttgtttattctcatcgattgactttggggacgcc
tcacattccgcttccagaggttattgccaggctcgcttactggccactgaacttgcgagc
ctgacaaacaaaccgcagctggtcgccaacatttgcttcgccgtcgacaatccgttcccg
cagcaaaagtccctgaagccgtcaccgaacctgctgacacagatctcgaaaacactctcg
tgtaccccgatccaggaaacagcactttcggtagccttgttgaactcggcaaatccggat
atagtgcgtgttgcggaagcgcatcttaaaatctgtcttagaggactaatcgaaaattac
gttgaatcagattctggcagcaacgtcgagggaagccttaacgacgtttcgccagaattc
ctgcagcaaatactgtccctgatttcgtacggcaaacacaccacctacggccttaccgaa
caaacgtacgaacgcttcaggcatcagctgtgtcgtgatttcccgcgtgtccgtgtgcca
ctaatcctcgcaccactactatacgcggaaaattccgaaatctccgccgaaatactaaaa
atcaacacacatagcatcctgcaatcgtcgatcatgaaaacctcctggacgaatctggtt
gtggaagttggttattctttcacggctaccctagacgattgccgtaatcatctgctgaaa
gttgggggacgagaaataacgccgcaggatgtggcgaagattgtgtcctccatgtgctta
acgcacgaaactctgtcggaaagtaacatcaatttgccgacgccgagcgcattctggccc
cagggcagtgatccgtccggtcaaaaaagcaaggacggaaatgggggttcgtccgcttcg
gaaaacaccacctggaagccggaggtgttggtacaagcactgaaggaagtggtaccgaac
ctgaactggaaggaggtctgtctcgcattagaccatccggagtttatgctgaaagatcgt
gctggattgtcattactgttgacgattgtaaagatgggtatgcagtccagtaacattggg
cagaacttcccggtcgagtgtctttaccagcggtggaccaatgtggaaggtcagctgtcg
attatttcgcaaattttgaagaatcccgacttgtactcgtttgctgatcatatttacacc
agtgtttcgcttgagctgctgaaaaccccgccggaaacggacaataaggaggtagcctct
tggatgtcattgcaccttgtcgatgttctgctgtacattgcggatcatgccaacttgagc
gagaaggtaatgaaaatcttcaaggtgcctggttcgctctgtcccgatatactgtttctg
gcgctattgcaaatcaatccaccgatgacgacggcccgccaggaactatttacctacttg
gtgccaatcttcctgagcaaccatccgaatgcgggtaccattcttcaccatgcctggaac
cattcaacgttcaaccttacgctgcggccaatcatactgcacgctatgtccgactggtac
atggttggagagggtgatcaatcacggctgtcgcgcatcctggatgtagcacaggatttg
aaagcactgtcgaatctgctcaacattcgtacgtatatgttcatcatcgatctggcttgt
ctggcttcgaggcgcgaatatttgaagctggagaagtggctggcggataaaatccgcgac
catggagaaccgtttgtgaagacgattctcaaatttctccaacgccgctgtccgcaaatt
atgggcgggaagtacagcgaggaacagatcccgaaatcggctcagttgccaccggaaacg
ctcagcacaatcctcaactgtttgcaagcgtgcatcggaaattgtacgcccgaagtagcg
gaaatgatacacaacatgacgcagtacggtatattgctcaattcgaagacacgcgcccaa
cagcaacagcagcagcagcaacagcaacaacaacaagctcctcagcagcaaccacctccg
ccgggtgtattgcgatcgcatcgtgggctagaagctttcggtgcggcgaacgcaatgggc
agccagttgctgccaccaatggttgactcgttgaacagtctgacagcgaacattggtggg
cttagcatcggcggtcctggcggtggaaatagtgcgtttagcttcaacaacatcatagct
acgcctgcatcaccgtcgcgcttgcttccatcgagtagtccgttcccaatgattccgctt
ccggctgctgcggcagccgcacatgccagtacgctgggtcgtttacagcaaacaccgaac
gataaactggtgggtggtgctggtggaggtggaggaggcgccggtggcattccgaatgct
gccattacacagtcaccgttccaggcggatgcggcgcagcccgtttcgaaggaggttgag
gatgaggcgaacagctatttccagcgtatctacaacttgccgccccatccgacgctgtcg
atcgacgaggtgctcgacatgttgcagcgctacaaggattcaccgaatcggcacgaaaac
gacgtttaccagtgcatgctgcggaatctgttcgaagagtacaaattcttcccccagtac
ccggacaaggagctccagacgacggcccaactgttcggtggaatggtggaacgaaatctc
gtcacgacatatgttgccctcgggctagctctgcgatgcgtgctggatgcgctcaaaaag
caggaaggtaccaagatgtactattttggtataacggcgctcgatcggttcaaaaacaag
ctccatctgtacccgaagtattgcgagtacgtgcgttcgattccgcactttagcgagttt
ccggcgcatctgatcgattacatcgattacggtgttcaggggctggagccaccgaacaaa
acgctcggtcctggaccgctgcccccaccgatcctgcagttcatcccgagtggtgcggct
ggtcgtggcccagcagtcggaaatccactgtaccgaagcaattccgtcactggcaccagc
aatcttacgctggccggttcaacgtccgcttccgctgcagcggcggcagcggccaccgtc
gctggtggtggggcaggcagcagtgcgggaacacccggcaaaataaaccttccggcacag
ctggtcgctccaggaggaggagccagtgcggggggcaatgttggcggtagtagcactggc
ggtactgttggcagcggtaccggtggacaaccgccacgcgtaaagtctattgcaaacgca
acgaacatcgacacgctgctagtagcgacacaggatcgtgaagagaagatcatttccccg
ccggatgcaatccaggacaagaccgcgttcatatttaacaatctgagtcaaatcaatctc
cagcaaaagtgtgaagagattaaggaaatcctgcagaaagattactacacttggttggca
cagtatctcgtgctaaagcgtgcctcgatcgaggtgaacttccacgtgctgtactccaac
tttttggatgcgttgaaaattaacgaaatcaacaaactcgtcacaaaggaaacattccgc
aacattcgcgtgctgttacggtcagacaagggtatagcgaacttttccgatcgctctttg
ctgaaaaaccttggccactggctgggcatgatgacgctcggccgcaacaaaccgatcctg
catctcgacattgacgtgaagtcgctgctggtggaggcgtacaacaagggtcagcaggag
ctgctatacgtggtgccgtttgtggcgaaggtcctggaatcgtgtgccaagagcaaggtt
ttcaaaccgcctaacccgtggacgatggcgattatgaacattctcgcggaactgcaccag
gagccggaacttaagctaaacttgaagtttgagattgaggtactgtgcaagaacctcaac
atcgacgtgagcgacctgaaaccagccatctatctcaaggacccagaacgtgcgcaaaac
atcgagtaccagctgtcccaaccgaagcccccgaaggaggcacaaccggtaatgggtggt
ggagctggagtgtccggcatcggtgtaccgggtaacgctggtggtgtggtggccgtagta
tctcagctaccaccaggaccggacgagatgggttcgagtggaccttctagctcacctgct
aacgtggcgatggatccggcgctggcagcaactggaccgccagaacctcgattccactac
tcggacatcaacattgccaatccgagctgtatcgcacagcatatcatctaccatccgacg
ctaaccatcttgcacacccactctcacctgaaggtgatcgtgaagaccagtctcgagaga
acgataaccgaatggatatcgttaatcgttgaccgtagtgtgaagattgcatccaaaacg
actgagcagattatccgcaaagatttcgcactcgatgcggacgaaacgcgaatgcgccgg
gcagcacacaacatggcgcgcagtcttgtggctggcatggcgatgattacttgtcgcgat
cagatgttgcaaagcatccagaacaacattaaagccggcttcgcgaacgcggctacgcac
gcccagaaagacattgtagaaggagccgccacccagctggccgtggataatatcgagctg
gtttcggcgttcatccagaagacggccatcgagaaggtagcgatcgaaatggacaagata
ctggcagaagacttccagctgcgcaagattgcccgtcaggagggtcgccgctattgggat
gcgaacgtgctctcgtaccaggcggaacgcatgccagaacggattcggctgaatgtgggc
ggtgtgtcaccgagccaattggcagtgtacgaggagttttcgcgcaacattcccggtttc
ctgccgatcacggagcgtgatgcagctcagtttgcaccaaagatgacggaactgatgccg
ttcgttgctacaccggacgagattggtgcgatgttcgatgagctagcaagcaagatggat
gcattcatcaagacgacacgcatcattcccatactgcagcttcacacgaacaacatggaa
caattgctggagtatttaattcacgcgcaccgctcgctagacaacttgaccgggtgtacg
ctgctgaacaaagcggtagaaggtttgctggaaggtttggttaacataccggaccaactc
gaacacatcaaactttatcgcgatattcatttgcgtgtgatgcgtcttatgcaagataat
cgcctatttggaccgctgtggaccaacaaagccatcacccggtacatgttggaatgccgc
gaagagctgcggtacaatgtagaggcggtcgatatgctgatttcgtccaactttgtcaac
atgcagcagtttgacatcatgctggtgcagctaatggataatggtaacaactatgtggcg
gtcgtgtttgcaatgcagctgctacaaacgttcttcatcgacgagcgtcataattcgttc
atcatcgagaatgagctggctggcacaattgaaatgctgcaccggctgaccgcacatcca
cgtgcaccggaagggctgacccatctgatcgaaatgctgcgggcaaatcatgatgcgaat
tccttcctgatggaccgtgccgtcgctgggccgacttcctatattcatgcgggcttagca
caagcaaggttggaaatcgacgattcgcctggttttctcgaacgagccgaatttctgctc
aaggattgggttacgattgctctctcaccgaacacctgccgtgatccgctaaagggcttt
agcgtgtttgtgggcaaaatgaatgcgcatggcattttgaagggtgatgaaccgttgaca
cgtttcttccgctttgctacccagtactgcatcgatctcacctatcgtaacatgaacgaa
ccgagtgcgaaagcgaaaattttccaattcatcgacgcttatgtaaggttgatcgcgttg
ttggtaaagcattcgggtgaaagtggcaacacgagcacgaagctgaatctgctgaacaag
attcttggcattgttcttggccttttgctacaggaccaggaaatacgttcgacggccttc
cagcaggtcggttaccatcgtatatttgccatgctgtttgcggaactgtctacgcaagat
ccaattttggaaaatattagcataaacgtgattaccgctttctgtcacatattccacatg
ttgcgaccatcgattgcgccagtattttgctactcctggctggagctgatcgcgcaccgc
gtattcattggccgtgtgcttgcgctgattccacagcaaaagggctggcaaatgtattcg
caactgctgatcgatttgttcaaatatcttgccccgttcttgcgcaatgccgagctggca
aaaccggtacagcatctgtacaagggtacgcttcgcgtgttgctcgtgctgttgcacgat
ttcccggagtttttgtgcgactatcatttcgcgttctgcgatgtaataccctcgaactgt
atccagatgcggaatttgatactgtcaccgtacccgcgaaatatgcgcttgcccgatcca
ttcaccccgaatctgaaggttgatatgttgaatgatattggcggatcgccgcgtatttcc
atcaactacgtgtcctccattcagcccccgagcttcaaaaaagatctcgattcgtatctg
aaggctcgtgctccagtcaccttcctgtccgagttgcgttcaaatttgcagatttccaac
gaggttggatcgcgctacaatattccgctaatgaatgcgcttgttctgtacgttggcacc
caagccattggacacatacgatcgaagaatctgggaccaacaatgtcaaccatcatccac
agcgctcatatggatattttccaaaacttggcagtggacctcgacactgagggacgttat
ctgttcctgaatgcaatcgcaaatcagttgcgctacccgaacagtcacacgcattacttt
agttgttgcattctgtatctgttcgtggaggcaaactcggaagcaattcaggagcaaatt
acgcgcgttctgctcgaacgcttgatcgtaaatcgaccgcatccgtggggtttgctgatc
accttcattgagttgattaaaaatccgatttataaattctgggagcacgatttcgttcat
tgtgctccggaaattgaacgactgtttgaatccgtggcaaagtcgtgcatggtgaccagc
aaaagccaacagcaaattcaaaacgtcgaacccgacattacggagtgtagctaa
DBGET
integrated database retrieval system
