Actinomadura madurae: LUW76_23665
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Entry
LUW76_23665 CDS
T08933
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
amaz
Actinomadura madurae
Pathway
amaz00190
Oxidative phosphorylation
amaz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amaz00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
LUW76_23665
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LUW76_23665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amaz03019
]
LUW76_23665
Enzymes [BR:
amaz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
LUW76_23665
Messenger RNA biogenesis [BR:
amaz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LUW76_23665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase
PP_kinase_C
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
URM97106
LinkDB
All DBs
Position
complement(5125248..5127335)
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AA seq
695 aa
AA seq
DB search
MTVNPGQHLPQQSEALPDDRFLDREESWLRFNQRVLELAEDPDLPLLERVRFLSIFSSNL
DEFFMVRVAGLARRMATGLAVQSASGRQPREVLARTGEVAHELMLRQASCFRHEMRPALG
DEGIDILRWDELAETEQERLRRLFRDRIYPVLTPLVVDSAHPFPYISGLSLNLAVIVRDP
ETDATMFARVKVPPLLPRFIEASPDRFTPLEDVIAAHLGQLFVGMEVVEHHAFRVTRNQD
LEIDDDISEGLLQALERELLRRRFGPVVRLEVEESISEGVLELLTSELAVDEGQIYRVAG
PLDLGGLAAIADLDRPELKYPPFVPSKEALPEDASIFSAIRERDVLVHHPYDSFTTTVQR
LIEDAATDPRVLAIKQTLYRTSGDSPIVDALMSAAEAGKQVVVVVELKARFDERANIAWA
RKLETAGCHVVYGFVGLKTHCKLALIVRQDAEGQLRRYCHIGTGNYHPKTARLYEDFGLL
TADPEVGEDVSALFNHLTGYSRQSSYHRLLVAPNNLRSGLVQRIEHEIDNRRAGHPARVR
IKCNSLVDEVVIDALYRASRAGVPVDVWVRGICALRPGVPGLSDLIRVRSVLGRFLEHSR
VFAFENGGEPEVWIGSADLMHRNLDRRVEALVTVTDRAQRDGLLDLLDLATDDGTHAWTL
AGDGTWTRNRPRPGETLLDIQTHLVKTRRWRTIDG
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgaccgttaatccgggacaacacctcccccaacagtccgaagcgctgcccgatgaccgc
ttcctcgaccgggaggagagctggctgagattcaaccagcgcgtcctggaactggccgag
gacccggacctcccgctgctcgaacgcgtccgcttcctgtcgatcttctccagcaacctg
gacgagttcttcatggtgcgcgtcgccggcctcgcccgccggatggcgaccgggctcgcc
gtgcagtccgcgagcggccggcagccccgcgaggtgctggcgcgcaccggggaggtcgcg
cacgagctgatgctgcggcaggcgtcctgcttccggcacgagatgcggcccgcgctcggc
gacgagggcatcgacatcctgcgctgggacgagctggccgagaccgagcaggagcggctg
cggcgcctcttccgcgaccgcatctaccccgtcctcaccccgctcgtcgtcgactcggcg
cacccgttcccctacatctcgggcctgtcgctgaacctcgcggtgatcgtccgcgacccg
gagacggacgccacgatgttcgcccgggtcaaggtgcccccgctgctgccgcgcttcatc
gaggcgtccccggaccggttcacgccgctggaggacgtcatcgccgcgcacctcgggcag
ctgttcgtcggcatggaggtcgtcgagcaccacgcgttccgcgtcacccgcaaccaggac
ctggagatcgacgacgacatcagcgagggcctcctgcaggctctggagcgcgagctgctg
cgccgccggttcggcccggtcgtccgcctggaggtcgaggagtcgatctccgagggggtg
ctggagctgctcacctccgagctggcggtggacgaggggcagatctaccgcgtcgcagga
ccgctcgacctcggcgggctcgcggccatcgccgacctcgaccggccggagctgaagtac
ccccctttcgtcccgtcgaaggaggcgctccctgaggacgcgagcatcttcagcgccatc
cgcgagcgcgacgtcctcgtccaccacccgtacgactcgttcaccacgaccgtccagcgg
ctgatcgaggacgcggcgaccgacccgcgcgtcctcgcgatcaagcagacgctgtaccgg
acgagcggcgactccccgatcgtggacgcgctgatgagcgccgccgaggccggcaagcag
gtggtggtcgtcgtcgagctgaaggcccggttcgacgagcgcgccaacatcgcgtgggcg
cgcaagctggagacggccggctgccacgtcgtctacgggttcgtcgggctgaagacgcac
tgcaagctcgcgctgatcgtccggcaggacgccgagggccagctgcgccgctactgccac
atcggcaccggcaactaccacccgaagaccgcccgactgtacgaggacttcgggctgctc
accgccgaccccgaggtgggcgaggacgtcagcgccctgttcaaccacctcaccggctac
tcgcggcagagctcctaccaccggctgctcgtcgcgccgaacaacctgcggtccgggctc
gtccagcggatcgagcacgagatcgacaaccggcgggccgggcatcccgcgcgggtgcgg
atcaagtgcaactcgctcgtggacgaggtggtcatcgacgcgctgtaccgggcgtcgcgg
gccggggtgccggtggacgtctgggtccgcggcatctgcgcgctccgtcccggcgtgccc
ggcctgtcggacctgatccgggtgcgcagcgtcctcggccggttcctggagcactcccgc
gtgttcgcgttcgagaacggcggcgagcccgaggtgtggatcggcagcgccgacctgatg
caccgcaacctggaccgccgcgtcgaggcgctcgtcaccgtcaccgaccgggcgcagcgc
gacgggctgctcgacctgctcgacctcgccaccgacgacggcacccacgcgtggacgctc
gccggcgacggcacctggacgcggaaccggccccgccccggcgagaccctgctcgacatc
cagacccacctcgtcaagacccgccgctggaggacgatcgatggctga
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