KEGG   Alteromonas mediterranea DE: MADE_000001020980
Entry
MADE_000001020980 CDS       T00747                                 
Name
(GenBank) signal recognition particle protein Srp54
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
amc  Alteromonas mediterranea DE
Pathway
amc02024  Quorum sensing
amc03060  Protein export
amc03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:amc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    MADE_000001020980
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    MADE_000001020980
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    MADE_000001020980
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:amc02044]
    MADE_000001020980
Enzymes [BR:amc01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     MADE_000001020980
Secretion system [BR:amc02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   MADE_000001020980
  Eukaryotic Sec-SRP protein
   MADE_000001020980
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin CbiA cobW AAA_22 AAA_30 Peptidase_C23 KTI12 AAA_33 AAA_16 SLFN-g3_helicase APS_kinase AAA_31 YqeC T2SSE VirC1 AAA_14 nSTAND3 AAA_19 Helicase_RecD ATP_bind_1 TsaE AAA_28 DO-GTPase1 Thymidylate_kin FliD_C AAA_24 AAA
Other DBs
NCBI-ProteinID: AGV53639
UniProt: T2DL64
LinkDB
Position
1407494..1408930
AA seq 478 aa
MFENLSERLGQTLRNVSGKGRLTEDNIKETLREVRMALLEADVALPVVKAFVAQVKERAV
GTEVTKSLKPGQVFIKIVQSELESVMGEANEKLNLATQPPAVVLMAGLQGAGKTTSVGKL
AKYLTEREKKKVMVVSADVYRPAAIKQLETLADEVKVAFHPSTILQKPIDIVNDAIAEAK
KNFFDVLLVDTAGRLHVDNDMMNEITELHAAVKPIETLFVVDAMTGQDAANTAKAFNDAL
PLTGVILTKADGDARGGAALSVRHITGKPIKFIGMGEKVDALEPFHPERIASRILGMGDV
LSLIEEVERKVDKSKAEKLAKKVQKGKGFDLQDFKDQLEQMKNMGGMMGMLDKLPGMGGM
SDKIKDQANDKQFNQMEAIINSMTPAERARPDIIKGSRKRRIAAGSGTQIQDVNRLLKQF
TQMQKMMKKMSGGGMKKMMRQMKGMVPPGGGLGGPGGPGGPGGFGGGGFGGGGGFPPR
NT seq 1437 nt   +upstreamnt  +downstreamnt
atgtttgagaatttatcagaacgcttaggccaaacattacgaaatgtaagtggtaaaggg
cgtcttactgaagacaatattaaagagacgctacgtgaagtgcgcatggcgctgcttgaa
gccgacgtagcgctgccagtggtcaaagcgtttgttgctcaggtaaaagagcgtgcggtt
ggtacagaagttactaaaagcttaaagccaggccaagtattcataaaaatcgttcagtct
gaactcgagtcggtaatgggggaggcgaatgaaaagcttaacctagccactcagcctcct
gctgtagtgcttatggctggtttacaaggtgcgggtaaaaccacctctgtaggtaaactt
gctaagtacctgactgaacgtgagaaaaagaaagtgatggtagtcagtgctgacgtttat
cgtccagccgctatcaagcagcttgaaaccctagctgatgaagtgaaggttgcgtttcac
ccatctactatcttacaaaagcccattgatatcgttaacgatgccatcgctgaagcgaag
aaaaacttctttgatgttctgcttgtagatacagcaggccgtttgcacgtcgataacgac
atgatgaacgaaattacagagttacacgctgcggttaagcccattgagaccctattcgta
gttgatgccatgacaggtcaagatgccgctaatacagcaaaagcgtttaacgacgcgcta
ccactgaccggtgttattcttactaaggccgacggtgacgcccgcggcggtgcggcatta
tctgtacgtcacataacaggtaagcccattaagttcatcggtatgggcgaaaaagtggat
gcgcttgagccattccaccctgagcgtattgcttctcgtatcttgggtatgggcgacgta
ctaagccttatcgaagaagttgagcgcaaggtcgacaaatcaaaagccgaaaagctggcg
aaaaaagttcaaaaaggcaagggctttgatcttcaagactttaaagatcagcttgagcaa
atgaagaacatgggcggcatgatgggcatgctagataagctgcctggcatgggtggtatg
tctgataagattaaagatcaggcaaacgacaagcagttcaaccaaatggaagccattatt
aattcaatgacaccagctgagcgcgctcgccctgatattatcaaaggctcgcgcaagcgt
cgtatcgcagcgggttcaggtacgcaaatacaagatgtaaaccgcttgcttaagcagttt
acacaaatgcagaaaatgatgaaaaaaatgtctggcggcggcatgaagaaaatgatgcgc
cagatgaaaggcatggtgccacccggtggcggtttaggtggaccaggcgggccaggcggc
cctggtggttttggcggaggcggcttcggcggaggcggtggtttccctcctcgctaa

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